Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 127 results

8AA0
DownloadVisualize
BU of 8aa0 by Molmil
Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12
Descriptor: DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ...
Authors:White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
Deposit date:2022-06-29
Release date:2023-06-07
Last modified:2023-06-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8AA2
DownloadVisualize
BU of 8aa2 by Molmil
Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25
Descriptor: DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ...
Authors:White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
Deposit date:2022-06-29
Release date:2023-06-07
Last modified:2023-06-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8AA3
DownloadVisualize
BU of 8aa3 by Molmil
Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25
Descriptor: MAGNESIUM ION, SusC homolog, SusD homolog, ...
Authors:White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
Deposit date:2022-06-29
Release date:2023-06-07
Last modified:2023-06-21
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8A9Y
DownloadVisualize
BU of 8a9y by Molmil
Substrate-free levan utilisation machinery (utilisome)
Descriptor: DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ...
Authors:White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
Deposit date:2022-06-29
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
6ZM1
DownloadVisualize
BU of 6zm1 by Molmil
Open-closed state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
8BVQ
DownloadVisualize
BU of 8bvq by Molmil
E. coli BAM complex (BamABCDE) bound to darobactin B
Descriptor: Darobactin-B, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Horne, J.E, Fenn, K.L, Radford, S.E, Ranson, N.A.
Deposit date:2022-12-05
Release date:2023-05-24
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Darobactin B Stabilises a Lateral-Closed Conformation of the BAM Complex in E. coli Cells.
Angew.Chem.Int.Ed.Engl., 62, 2023
8BWC
DownloadVisualize
BU of 8bwc by Molmil
E. coli BAM complex (BamABCDE) wild-type
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Machin, J.M, Radford, S.E, Ranson, N.A.
Deposit date:2022-12-06
Release date:2023-05-24
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Darobactin B Stabilises a Lateral-Closed Conformation of the BAM Complex in E. coli Cells.
Angew.Chem.Int.Ed.Engl., 62, 2023
6ZLU
DownloadVisualize
BU of 6zlu by Molmil
Closed-closed state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2021-01-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
7ABL
DownloadVisualize
BU of 7abl by Molmil
HBV pgRNA T=4 NCP icosahedral symmetry
Descriptor: Capsid protein
Authors:Patel, N, Clark, S, Weis, E.U, Mata, C.P, Bohon, J, Farquhar, E, Ranson, N.A, Twarock, R, Stockley, P.G.
Deposit date:2020-09-07
Release date:2021-10-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:In vitro functional analysis of gRNA sites regulating assembly of hepatitis B virus.
Commun Biol, 4, 2021
6ZLT
DownloadVisualize
BU of 6zlt by Molmil
Open-open state of the Bt1762-Bt1763 levan transport system
Descriptor: SusC homolog, SusD homolog
Authors:White, J.B.R, van den Berg, B, Ranson, N.A.
Deposit date:2020-07-01
Release date:2020-11-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
8A7O
DownloadVisualize
BU of 8a7o by Molmil
beta-2-microglobulin DeltaN6 amyloid fibril form 2PFa
Descriptor: Beta-2-microglobulin form pI 5.3
Authors:Wilkinson, M, Gallardo, R, Radford, S.E, Ranson, N.A.
Deposit date:2022-06-21
Release date:2023-03-22
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Disease-relevant beta 2 -microglobulin variants share a common amyloid fold.
Nat Commun, 14, 2023
8A7T
DownloadVisualize
BU of 8a7t by Molmil
beta-2-microglobulin D76N amyloid fibril form 2PFa
Descriptor: Beta-2-microglobulin
Authors:Wilkinson, M, Gallardo, R, Radford, S.E, Ranson, N.A.
Deposit date:2022-06-21
Release date:2023-03-22
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Disease-relevant beta 2 -microglobulin variants share a common amyloid fold.
Nat Commun, 14, 2023
8A7P
DownloadVisualize
BU of 8a7p by Molmil
beta-2-microglobulin DeltaN6 amyloid fibril form 2PFb
Descriptor: Beta-2-microglobulin form pI 5.3
Authors:Wilkinson, M, Gallardo, R, Radford, S.E, Ranson, N.A.
Deposit date:2022-06-21
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Disease-relevant beta 2 -microglobulin variants share a common amyloid fold.
Nat Commun, 14, 2023
8A7Q
DownloadVisualize
BU of 8a7q by Molmil
beta-2-microglobulin V27M amyloid fibril form 4PF
Descriptor: Beta-2-microglobulin
Authors:Wilkinson, M, Gallardo, R, Radford, S.E, Ranson, N.A.
Deposit date:2022-06-21
Release date:2023-03-22
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Disease-relevant beta 2 -microglobulin variants share a common amyloid fold.
Nat Commun, 14, 2023
6QOZ
DownloadVisualize
BU of 6qoz by Molmil
CryoEM reconstruction of Cowpea Mosaic Virus (CPMV) bound to an Affimer reagent
Descriptor: Affimer binding protein, Cowpea mosaic virus large subunit, RNA2 polyprotein
Authors:Hesketh, E.L, Tiede, C, Adamson, H, Adams, T.L, Byrne, M.J, Meshcheriakova, Y, Lomonossoff, G.P, Kruse, I, McPherson, M.J, Tomlinson, D.C, Ranson, N.A.
Deposit date:2019-02-13
Release date:2019-12-18
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Affimer reagents as tools in diagnosing plant virus diseases.
Sci Rep, 9, 2019
6RQF
DownloadVisualize
BU of 6rqf by Molmil
3.6 Angstrom cryo-EM structure of the dimeric cytochrome b6f complex from Spinacia oleracea with natively bound thylakoid lipids and plastoquinone molecules
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Malone, L.A, Qian, P, Mayneord, G.E, Hitchcock, A, Farmer, D, Thompson, R, Swainsbury, D.J.K, Ranson, N, Hunter, C.N, Johnson, M.P.
Deposit date:2019-05-15
Release date:2019-11-13
Last modified:2019-12-04
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Cryo-EM structure of the spinach cytochrome b6f complex at 3.6 angstrom resolution.
Nature, 575, 2019
6RJ0
DownloadVisualize
BU of 6rj0 by Molmil
Atlantic Cod Nervous Necrosis Virus-Like Particle produced in Nicotiana benthamiana
Descriptor: Coat protein
Authors:Hurdiss, D.L, Ranson, N.A.
Deposit date:2019-04-25
Release date:2019-07-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Plant-Made Nervous Necrosis Virus-Like Particles Protect Fish Against Disease.
Front Plant Sci, 10, 2019
6SCO
DownloadVisualize
BU of 6sco by Molmil
Cryo-EM Structure of Potato Leaf Roll Virus VLP
Descriptor: Coat protein
Authors:Byrne, M.J, Ranson, N.A.
Deposit date:2019-07-25
Release date:2019-10-02
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Combining Transient Expression and Cryo-EM to Obtain High-Resolution Structures of Luteovirid Particles.
Structure, 27, 2019
6SCL
DownloadVisualize
BU of 6scl by Molmil
Cryo-EM Structure of Barley Yellow Dwarf Virus VLP
Descriptor: Coat protein
Authors:Byrne, M.J, Ranson, N.A.
Deposit date:2019-07-24
Release date:2019-10-02
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Combining Transient Expression and Cryo-EM to Obtain High-Resolution Structures of Luteovirid Particles.
Structure, 27, 2019
6SLI
DownloadVisualize
BU of 6sli by Molmil
Structure of the RagAB peptide transporter
Descriptor: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ALA-SER-THR-THR-GLY-GLY-ASN-SER-GLN-ARG-GLY-SER-GLY, ...
Authors:Madej, M, Ranson, N.A, White, J.B.R.
Deposit date:2019-08-19
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
8A41
DownloadVisualize
BU of 8a41 by Molmil
Nudaurelia capensis omega virus procapsid at pH7.6 (insect cell expressed VLPs)
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-06-10
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.88 Å)
Cite:Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs)
To be published
8A3C
DownloadVisualize
BU of 8a3c by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs)
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-06-08
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs)
To be published
8A6J
DownloadVisualize
BU of 8a6j by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs)
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-06-17
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Decoding virus maturation with cryo-EM structures of intermediates
To be published
6R8F
DownloadVisualize
BU of 6r8f by Molmil
Cryo-EM structure of the Human BRISC-SHMT2 complex
Descriptor: BRISC and BRCA1-A complex member 2,BRCC45 (BRE, BRISC and BRCA1-A complex member 2), BRISC complex subunit Abraxas 2, ...
Authors:Walden, M, Hesketh, E, Tian, L, Ranson, N.A, Greenberg, R.A, Zeqiraj, E.
Deposit date:2019-04-01
Release date:2019-06-05
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Metabolic control of BRISC-SHMT2 assembly regulates immune signalling.
Nature, 570, 2019
8AAY
DownloadVisualize
BU of 8aay by Molmil
Nudaurelia capensis omega virus maturation intermediate captured at pH5.6 (insect cell expressed VLPs): small class from symmetry expansion
Descriptor: p70
Authors:Castells-Graells, R, Hesketh, E.L, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
Deposit date:2022-07-04
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Decoding virus maturation with cryo-EM structures of intermediates
To be published

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon