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PDB: 497 results

3GSH
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BU of 3gsh by Molmil
Three-dimensional structure of a post translational modified barley LTP1
Descriptor: (12E)-10-oxooctadec-12-enoic acid, Non-specific lipid-transfer protein 1, SODIUM ION, ...
Authors:Lascombe, M.B, Prange, T, Bakan, B, Marion, D.
Deposit date:2009-03-27
Release date:2009-12-15
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of oxylipin-conjugated barley LTP1 highlights the unique plasticity of the hydrophobic cavity of these plant lipid-binding proteins.
Biochem.Biophys.Res.Commun., 390, 2009
2IC0
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BU of 2ic0 by Molmil
Urate oxidase under 2.0 MPa pressure of xenon
Descriptor: 8-AZAXANTHINE, SODIUM ION, Uricase, ...
Authors:Colloc'h, N, Retailleau, P, Sopkova-de Oliveira Santos, J, Abraini, J.H, Prange, T.
Deposit date:2006-09-12
Release date:2007-02-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Protein Crystallography under Xenon and Nitrous Oxide Pressure: Comparison with In Vivo Pharmacology Studies and Implications for the Mechanism of Inhaled Anesthetic Action
Biophys.J., 92, 2007
3C1T
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BU of 3c1t by Molmil
Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site
Descriptor: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, dihydroflavonol 4-reductase
Authors:Trabelsi, N, Petit, P, Granier, T, Langlois d'Estaintot, B, Delrot, S, Gallois, B.
Deposit date:2008-01-24
Release date:2008-02-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Structural evidence for the inhibition of grape dihydroflavonol 4-reductase by flavonols
Acta Crystallogr.,Sect.D, D64, 2008
4MTY
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BU of 4mty by Molmil
Structure at 1A resolution of a helical aromatic foldamer-protein complex.
Descriptor: 4-(HYDROXYMERCURY)BENZOIC ACID, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Ogayone, T, Buratto, J, Langlois D'Estaintot, B, Stupfel, M, Granier, T, Gallois, B, Huc, Y.
Deposit date:2013-09-20
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure of a complex formed by a protein and a helical aromatic oligoamide foldamer at 2.1 a resolution.
Angew.Chem.Int.Ed.Engl., 53, 2014
5XF1
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BU of 5xf1 by Molmil
Structure of the Full-length glucagon class B G protein-coupled receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, H, Qiao, A, Yang, D, Yang, L, Dai, A, de Graaf, C, Reedtz-Runge, S, Dharmarajan, V, Zhang, H, Han, G.W, Grant, T, Sierra, R, Weierstall, U, Nelson, G, Liu, W, Wu, Y, Ma, L, Cai, X, Lin, G, Wu, X, Geng, Z, Dong, Y, Song, G, Griffin, P, Lau, J, Cherezov, V, Yang, H, Hanson, M, Stevens, R, Jiang, H, Wang, M, Zhao, Q, Wu, B.
Deposit date:2017-04-06
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structure of the full-length glucagon class B G-protein-coupled receptor.
Nature, 546, 2017
1XT4
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BU of 1xt4 by Molmil
Urate Oxidase From Aspergillus Flavus Complexed With Guanine
Descriptor: GUANINE, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-10-21
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
2ICQ
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BU of 2icq by Molmil
urate oxidase under 2.0 MPa pressure of nitrous oxide
Descriptor: 8-AZAXANTHINE, CYSTEINE, NITROUS OXIDE, ...
Authors:Colloc'h, N, Sopkova-de Oliveira Santos, J, Retailleau, P, Prange, T, Abraini, J.H.
Deposit date:2006-09-13
Release date:2007-02-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein Crystallography under Xenon and Nitrous Oxide Pressure: Comparison with In Vivo Pharmacology Studies and Implications for the Mechanism of Inhaled Anesthetic Action
Biophys.J., 92, 2007
3BJP
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BU of 3bjp by Molmil
Urate oxidase cyanide uric acid ternary complex
Descriptor: ACETYL GROUP, CYANIDE ION, SODIUM ION, ...
Authors:Gabison, L, Prange, T, Colloc'h, N, El Hajji, M, Castro, B, Chiadmi, M.
Deposit date:2007-12-04
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of urate oxidase in complex with its natural substrate inhibited by cyanide: Mechanistic implications
Bmc Struct.Biol., 8, 2008
5WAU
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BU of 5wau by Molmil
Crystal Structure of CO-bound Cytochrome c Oxidase determined by Synchrotron X-Ray Crystallography at 100 K
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Fromme, R, Ishigami, I, Yeh, S.Y, Zatsepin, N, Grant, T, Fromme, P, Rousseau, D.
Deposit date:2017-06-27
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4ZZB
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BU of 4zzb by Molmil
The GLIC pentameric Ligand-Gated Ion Channel Locally-closed form complexed to xenon
Descriptor: ACETATE ION, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Sauguet, L, Fourati, Z, Prange, T, Delarue, M, Colloc'h, N.
Deposit date:2015-05-22
Release date:2016-03-02
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Basis for Xenon Inhibition in a Cationic Pentameric Ligand-Gated Ion Channel.
Plos One, 11, 2016
5A22
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BU of 5a22 by Molmil
Structure of the L protein of vesicular stomatitis virus from electron cryomicroscopy
Descriptor: VESICULAR STOMATITIS VIRUS L POLYMERASE, ZINC ION
Authors:Liang, B, Li, Z, Jenni, S, Rameh, A.A, Morin, B.M, Grant, T, Grigorieff, N, Harrison, S.C, Whelan, S.P.J.
Deposit date:2015-05-06
Release date:2015-08-19
Last modified:2019-04-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the L Protein of Vesicular Stomatitis Virus from Electron Cryomicroscopy.
Cell(Cambridge,Mass.), 162, 2015
2IE7
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BU of 2ie7 by Molmil
Annexin V under 2.0 MPa pressure of nitrous oxide
Descriptor: Annexin A5, CALCIUM ION, NITROUS OXIDE, ...
Authors:Colloc'h, N, Sopkova-de Oliveira Santos, J, Prange, T, Brisson, A, Langlois d'Estainto, B, Gallois, B.
Deposit date:2006-09-18
Release date:2007-02-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein Crystallography under Xenon and Nitrous Oxide Pressure: Comparison with In Vivo Pharmacology Studies and Implications for the Mechanism of Inhaled Anesthetic Action
Biophys.J., 92, 2007
5B3J
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BU of 5b3j by Molmil
Activation of NMDA receptors and the mechanism of inhibition by ifenprodil
Descriptor: Fab, heavy chain, light chain, ...
Authors:Tajima, N, Karakas, E, Grant, T, Simorowski, N, Diaz-Avalos, R, Grigorieff, N, Furukawa, H.
Deposit date:2016-03-01
Release date:2016-05-11
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Activation of NMDA receptors and the mechanism of inhibition by ifenprodil
Nature, 534, 2016
3HFS
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BU of 3hfs by Molmil
Structure of apo anthocyanidin reductase from vitis vinifera
Descriptor: Anthocyanidin reductase, CHLORIDE ION
Authors:Gargouri, M, Mauge, C, Langlois d'Estaintot, B, Granier, T, Manigan, C, Gallois, B.
Deposit date:2009-05-12
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structure and epimerase activity of anthocyanidin reductase from Vitis vinifera.
Acta Crystallogr.,Sect.D, 65, 2009
1XXJ
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BU of 1xxj by Molmil
Urate oxidase from aspergillus flavus complexed with 5-amino 6-nitro uracil
Descriptor: 5-AMINO-6-NITROPYRIMIDINE-2,4(1H,3H)-DIONE, BENZENE, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-11-05
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
6FDL
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BU of 6fdl by Molmil
Crystal structure of the NYN domain of human MARF1
Descriptor: Meiosis regulator and mRNA stability factor 1
Authors:Jinek, M, Brandmann, T.
Deposit date:2017-12-26
Release date:2018-11-07
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Human MARF1 is an endoribonuclease that interacts with the DCP1:2 decapping complex and degrades target mRNAs.
Nucleic Acids Res., 46, 2018
5XEZ
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BU of 5xez by Molmil
Structure of the Full-length glucagon class B G protein-coupled receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-{[(4-cyclohexylphenyl){[3-(methylsulfonyl)phenyl]carbamoyl}amino]methyl}-N-(1H-tetrazol-5-yl)benzamide, ...
Authors:Zhang, H, Qiao, A, Yang, D, Yang, L, Dai, A, de Graaf, C, Reedtz-Runge, S, Dharmarajan, V, Zhang, H, Han, G.W, Grant, T, Sierra, R, Weierstall, U, Nelson, G, Liu, W, Wu, Y, Ma, L, Cai, X, Lin, G, Wu, X, Geng, Z, Dong, Y, Song, G, Griffin, P, Lau, J, Cherezov, V, Yang, H, Hanson, M, Stevens, R, Jiang, H, Wang, M, Zhao, Q, Wu, B.
Deposit date:2017-04-06
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the full-length glucagon class B G-protein-coupled receptor.
Nature, 546, 2017
1XY3
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BU of 1xy3 by Molmil
Urate oxidase from aspergillus flavus complexed with guanine
Descriptor: GUANINE, Uricase
Authors:Retailleau, P, Colloc'h, N, Vivares, D, Bonnete, F, Castro, B, El Hajji, M, Prange, T.
Deposit date:2004-11-09
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Urate oxidase from Aspergillus flavus: new crystal-packing contacts in relation to the content of the active site.
Acta Crystallogr.,Sect.D, 61, 2005
3V4A
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BU of 3v4a by Molmil
Structure of ar lbd with activator peptide and sarm inhibitor 2
Descriptor: (5R)-3-(3,4-dichlorophenyl)-5-(4-hydroxyphenyl)-1,5-dimethyl-2-thioxoimidazolidin-4-one, Androgen receptor, SULFATE ION
Authors:Nique, F, Hebbe, S, Peixoto, C, Annoot, D, Lefrancois, J.-M, Duval, E, Michoux, L, Triballeau, N, Lemoullec, J.M, Mollat, P, Thauvin, M, Prange, T, Minet, D, Clement-Lacroix, P, Robin-Jagerschmidt, C, Fleury, D, Guedin, D, Deprez, P.
Deposit date:2011-12-14
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery of diarylhydantoins as new selective androgen receptor modulators.
J.Med.Chem., 55, 2012
6N1R
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BU of 6n1r by Molmil
Tetrahedral oligomeric complex of GyrA N-terminal fragment, solved by cryoEM in tetrahedral symmetry
Descriptor: DNA gyrase subunit A
Authors:Soczek, K.M, Grant, T, Rosenthal, P.B, Mondragon, A.
Deposit date:2018-11-10
Release date:2018-12-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:CryoEM structures of open dimers of Gyrase A in complex with DNA illuminate mechanism of strand passage.
Elife, 7, 2018
4ZZC
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BU of 4zzc by Molmil
The GLIC pentameric Ligand-Gated Ion Channel open form complexed to xenon
Descriptor: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
Authors:Sauguet, L, Fourati, Z, Prange, T, Delarue, M, Colloc'h, N.
Deposit date:2015-05-22
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Xenon Inhibition in a Cationic Pentameric Ligand-Gated Ion Channel.
Plos One, 11, 2016
3V49
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BU of 3v49 by Molmil
Structure of ar lbd with activator peptide and sarm inhibitor 1
Descriptor: 4-[(4R)-4-(4-hydroxyphenyl)-3,4-dimethyl-2,5-dioxoimidazolidin-1-yl]-2-(trifluoromethyl)benzonitrile, Androgen receptor, activator peptide, ...
Authors:Nique, F, Hebbe, S, Peixoto, C, Annoot, D, Lefrancois, J.-M, Duval, E, Michoux, L, Triballeau, N, Lemoullec, J.-M, Mollat, P, Thauvin, M, Prange, T, Minet, D, Clement-Lacroix, P, Robin-Jagerschmidt, C, Fleury, D, Guedin, D, Deprez, P.
Deposit date:2011-12-14
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of diarylhydantoins as new selective androgen receptor modulators.
J.Med.Chem., 55, 2012
3BXX
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BU of 3bxx by Molmil
Binding of two substrate analogue molecules to dihydroflavonol 4-reductase alters the functional geometry of the catalytic site
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, dihydroflavonol 4-reductase
Authors:Trabelsi, N, Petit, P, Granier, T, Langlois d'Estaintot, B, Delrot, S, Gallois, B.
Deposit date:2008-01-15
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural evidence for the inhibition of grape dihydroflavonol 4-reductase by flavonols
Acta Crystallogr.,Sect.D, D64, 2008
6W1P
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BU of 6w1p by Molmil
RT XFEL structure of the one-flash state of Photosystem II (1F, S2-rich) at 2.26 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Ibrahim, M, Fransson, T, Chatterjee, R, Cheah, M.H, Hussein, R, Lassalle, L, Sutherlin, K.D, Young, I.D, Fuller, F.D, Gul, S, Kim, I.-S, Simon, P.S, de Lichtenberg, C, Chernev, P, Bogacz, I, Pham, C, Orville, A.M, Saichek, N, Northen, T.R, Batyuk, A, Carbajo, S, Alonso-Mori, R, Tono, K, Owada, S, Bhowmick, A, Bolotovski, R, Mendez, D, Moriarty, N.W, Holton, J.M, Dobbek, H, Brewster, A.S, Adams, P.D, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yachandra, V.K, Yano, J.
Deposit date:2020-03-04
Release date:2020-05-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism.
Proc.Natl.Acad.Sci.USA, 117, 2020
6W1R
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BU of 6w1r by Molmil
RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.23 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Ibrahim, M, Fransson, T, Chatterjee, R, Cheah, M.H, Hussein, R, Lassalle, L, Sutherlin, K.D, Young, I.D, Fuller, F.D, Gul, S, Kim, I.-S, Simon, P.S, de Lichtenberg, C, Chernev, P, Bogacz, I, Pham, C, Orville, A.M, Saichek, N, Northen, T.R, Batyuk, A, Carbajo, S, Alonso-Mori, R, Tono, K, Owada, S, Bhowmick, A, Bolotovski, R, Mendez, D, Moriarty, N.W, Holton, J.M, Dobbek, H, Brewster, A.S, Adams, P.D, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yachandra, V.K, Yano, J.
Deposit date:2020-03-04
Release date:2020-05-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism.
Proc.Natl.Acad.Sci.USA, 117, 2020

221371

數據於2024-06-19公開中

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