Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 728 results

5GK5
DownloadVisualize
BU of 5gk5 by Molmil
Apo structure of fructose 1,6-bisphosphate aldolase from Escherichia coli at 1.9 angstrom resolution
Descriptor: DI(HYDROXYETHYL)ETHER, Fructose-bisphosphate aldolase class 2, GLYCEROL, ...
Authors:Tran, T.H, Huynh, K.H, Ho, T.H, Kang, L.W.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Apo structure of fructose 1,6-bisphosphate aldolase from Escherichia coli at 1.9 angstrom resolution
To Be Published
1KDT
DownloadVisualize
BU of 1kdt by Molmil
CYTIDINE MONOPHOSPHATE KINASE FROM E.COLI IN COMPLEX WITH 2',3'-DIDEOXY-CYTIDINE MONOPHOSPHATE
Descriptor: 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, CYTIDYLATE KINASE, SULFATE ION
Authors:Bertrand, T, Briozzo, P, Assairi, L, Ofiteru, A, Bucurenci, N, Munier-Lehmann, H, Golinelli-Pimpaneau, B, Barzu, O, Gilles, A.M.
Deposit date:2001-11-13
Release date:2002-01-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Sugar specificity of bacterial CMP kinases as revealed by crystal structures and mutagenesis of Escherichia coli enzyme.
J.Mol.Biol., 315, 2002
1KDP
DownloadVisualize
BU of 1kdp by Molmil
CYTIDINE MONOPHOSPHATE KINASE FROM E. COLI IN COMPLEX WITH 2'-DEOXY-CYTIDINE MONOPHOSPHATE
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, CYTIDYLATE KINASE, SULFATE ION
Authors:Bertrand, T, Briozzo, P, Assairi, L, Ofiteru, A, Bucurenci, N, Munier-Lehmann, H, Golinelli-Pimpaneau, B, Barzu, O, Gilles, A.M.
Deposit date:2001-11-13
Release date:2002-01-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Sugar specificity of bacterial CMP kinases as revealed by crystal structures and mutagenesis of Escherichia coli enzyme.
J.Mol.Biol., 315, 2002
5GK3
DownloadVisualize
BU of 5gk3 by Molmil
Native structure of fructose 1,6-bisphosphate aldolase from Escherichia coli at 1.8 Angstrom resolution
Descriptor: DI(HYDROXYETHYL)ETHER, Fructose-bisphosphate aldolase class 2, GLYCEROL, ...
Authors:Tran, T.H, Huynh, K.H, Ho, T.H, Kang, L.W.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Apo structure of fructose 1,6-bisphosphate aldolase from Escherichia coli at 1.8 Angstrom resolution
To Be Published
5GK6
DownloadVisualize
BU of 5gk6 by Molmil
Structure of E.Coli fructose 1,6-bisphosphate aldolase, Citrate bound form
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, Fructose-bisphosphate aldolase class 2, ...
Authors:Tran, T.H, Huynh, K.H, Ho, T.H, Kang, L.W.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of E.Coli fructose 1,6-bisphosphate aldolase, Citrate bound form
To Be Published
5Y42
DownloadVisualize
BU of 5y42 by Molmil
Native-crystal structure of three chain non-toxic type II ribosome inactivating protein purified from the seeds of Trichosanthes anguina
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lectin, Seed lectin
Authors:Chandran, T, Vijayan, M.
Deposit date:2017-07-31
Release date:2018-08-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Ligand binding and retention in snake gourd seed lectin (SGSL). A crystallographic, thermodynamic and molecular dynamics study.
Glycobiology, 28, 2018
5GK8
DownloadVisualize
BU of 5gk8 by Molmil
Structure of E.Coli fructose 1,6-bisphosphate aldolase, Acetate bound form
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Fructose-bisphosphate aldolase class 2, ...
Authors:Tran, T.H, Huynh, K.H, Ho, T.H, Kang, L.W.
Deposit date:2016-07-03
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structure of E.Coli fructose 1,6-bisphosphate aldolase, Acetate bound form
To Be Published
3I7Z
DownloadVisualize
BU of 3i7z by Molmil
Protein Tyrosine Phosphatase 1B - Transition state analog for the first catalytic step
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, EGFR receptor fragment, GLYCEROL, ...
Authors:Brandao, T.A.S, Johnson, S.J, Hengge, A.C.
Deposit date:2009-07-09
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into the reaction of protein-tyrosine phosphatase 1B: crystal structures for transition state analogs of both catalytic steps.
J.Biol.Chem., 285, 2010
1KDO
DownloadVisualize
BU of 1kdo by Molmil
CYTIDINE MONOPHOSPHATE KINASE FROM E. COLI IN COMPLEX WITH CYTIDINE MONOPHOSPHATE
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, CYTIDYLATE KINASE, SULFATE ION
Authors:Bertrand, T, Briozzo, P, Assairi, L, Ofiteru, A, Bucurenci, N, Munier-Lehmann, H, Golinelli-Pimpaneau, B, Barzu, O, Gilles, A.M.
Deposit date:2001-11-13
Release date:2002-01-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sugar specificity of bacterial CMP kinases as revealed by crystal structures and mutagenesis of Escherichia coli enzyme.
J.Mol.Biol., 315, 2002
3KXU
DownloadVisualize
BU of 3kxu by Molmil
Crystal structure of human ferritin FTL498InsTC pathogenic mutant
Descriptor: CADMIUM ION, Ferritin, SULFATE ION
Authors:Granier, T, Gallois, B, Langlois d'Estaintot, B, Arosio, P.
Deposit date:2009-12-04
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mutant ferritin L-chains that cause neurodegeneration act in a dominant-negative manner to reduce ferritin iron incorporation.
J.Biol.Chem., 285, 2010
5US4
DownloadVisualize
BU of 5us4 by Molmil
Crystal structure of human KRAS G12D mutant in complex with GDP
Descriptor: GLYCEROL, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Tran, T, Kaplan, A, Stockwell, B.R, Tong, L.
Deposit date:2017-02-13
Release date:2017-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Multivalent Small-Molecule Pan-RAS Inhibitors.
Cell, 168, 2017
3BS5
DownloadVisualize
BU of 3bs5 by Molmil
Crystal Structure of hCNK2-SAM/dHYP-SAM Complex
Descriptor: Connector enhancer of kinase suppressor of ras 2, Protein aveugle
Authors:Rajakulendran, T, Ceccarelli, D.F, Kurinov, I, Sicheri, F.
Deposit date:2007-12-22
Release date:2008-02-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling.
Proc.Natl.Acad.Sci.USA, 105, 2008
5DTJ
DownloadVisualize
BU of 5dtj by Molmil
Crystal Structure of dfp-inhibited mouse acetylcholinesterase in complex with the reactivator SP-134
Descriptor: 1-[5-(2,4-dichlorophenoxy)pentyl]-1H-imidazole, Acetylcholinesterase
Authors:Tran, T.H, Tong, L.
Deposit date:2015-09-18
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Discovery of New Classes of Compounds that Reactivate Acetylcholinesterase Inhibited by Organophosphates.
Chembiochem, 16, 2015
4Z8S
DownloadVisualize
BU of 4z8s by Molmil
Structural studies on a non-toxic homologue of type II RIPs from Momordica charantia (bitter gourd)-Native-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Chandran, T, Sharma, A, Vijayan, M.
Deposit date:2015-04-09
Release date:2016-03-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.
J.Biosci., 40, 2015
2ZHE
DownloadVisualize
BU of 2zhe by Molmil
Exploring thrombin S3 pocket
Descriptor: Hirudin variant-2, N-cyclooctylglycyl-N-(4-carbamimidoylbenzyl)-L-prolinamide, SODIUM ION, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-02-04
Release date:2009-02-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Exploring thrombin S3 pocket
To be Published
4ZLB
DownloadVisualize
BU of 4zlb by Molmil
Structural studies on a non-toxic homologue of type II RIPs from Momordica charantia (bitter gourd) in complex with lactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chandran, T, Sharma, A, Vijayan, M.
Deposit date:2015-05-01
Release date:2016-03-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.
J.Biosci., 40, 2015
4ZFU
DownloadVisualize
BU of 4zfu by Molmil
Structural studies on a non-toxic homologue of type II RIPs from Momordica charantia (bitter gourd) in complex with N-acetyl D galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chandran, T, Sharma, A, Vijayan, M.
Deposit date:2015-04-21
Release date:2016-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.
J.Biosci., 40, 2015
4ZA3
DownloadVisualize
BU of 4za3 by Molmil
Structural studies on a non-toxic homologue of type II RIPs from Momordica charantia (bitter gourd)-Native-3
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Chandran, T, Sharma, A, Vijayan, M.
Deposit date:2015-04-13
Release date:2016-03-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.
J.Biosci., 40, 2015
2ZFT
DownloadVisualize
BU of 2zft by Molmil
Exploring trypsin S3 pocket
Descriptor: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclopentylamino)ethanoyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-01-11
Release date:2009-01-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Congeneric but still distinct: how closely related trypsin ligands exhibit different thermodynamic and structural properties
J.Mol.Biol., 405, 2011
4ZFW
DownloadVisualize
BU of 4zfw by Molmil
Structural studies on a non-toxic homologue of type II RIPs from Momordica charantia (bitter gourd) in complex with galactose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Chandran, T, Sharma, A, Vijayan, M.
Deposit date:2015-04-21
Release date:2016-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural studies on a non-toxic homologue of type II RIPs from bitter gourd: Molecular basis of non-toxicity, conformational selection and glycan structure.
J.Biosci., 40, 2015
2ZHF
DownloadVisualize
BU of 2zhf by Molmil
Exploring thrombin S3 pocket
Descriptor: (S)-N-(4-carbamimidoylbenzyl)-1-(3-cyclopentylpropanoyl)pyrrolidine-2-carboxamide, GLYCEROL, Hirudin variant-2, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-02-04
Release date:2009-02-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Exploring thrombin S3 pocket
To be Published
9BJZ
DownloadVisualize
BU of 9bjz by Molmil
Structure of the human DDD-Ube2e2 complex
Descriptor: DET1 homolog, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, ...
Authors:Loughran, T, Turk, L.S, Brown, S.H.J, Mace, P.D.
Deposit date:2024-04-26
Release date:2025-03-05
Last modified:2025-03-12
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:DET1 dynamics underlie cooperative ubiquitination by CRL4 DET1-COP1 complexes.
Sci Adv, 11, 2025
2ZQ2
DownloadVisualize
BU of 2zq2 by Molmil
Exploring trypsin S3 pocket
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-08-03
Release date:2009-08-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Congeneric but still distinct: how closely related trypsin ligands exhibit different thermodynamic and structural properties
J.Mol.Biol., 405, 2011
1C1M
DownloadVisualize
BU of 1c1m by Molmil
PORCINE ELASTASE UNDER XENON PRESSURE (8 BAR)
Descriptor: CALCIUM ION, PROTEIN (PORCINE ELASTASE), SULFATE ION, ...
Authors:Prange, T, Schiltz, M, Pernot, L, Colloc'h, N, Longhi, S, Bourguet, W, Fourme, R.
Deposit date:1999-07-22
Release date:1999-07-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Exploring hydrophobic sites in proteins with xenon or krypton.
Proteins, 30, 1998
4AT5
DownloadVisualize
BU of 4at5 by Molmil
CRYSTAL STRUCTURE OF TRKB KINASE DOMAIN IN COMPLEX WITH GW2580
Descriptor: 5-{3-methoxy-4-[(4-methoxybenzyl)oxy]benzyl}pyrimidine-2,4-diamine, BDNF/NT-3 GROWTH FACTORS RECEPTOR, GLYCEROL
Authors:Bertrand, T, Kothe, M, Liu, J, Dupuy, A, Rak, A, Berne, P.F, Davis, S, Gladysheva, T, Valtre, C, Crenne, J.Y, Mathieu, M.
Deposit date:2012-05-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The Crystal Structures of Trka and Trkb Suggest Key Regions for Achieving Selective Inhibition.
J.Mol.Biol., 423, 2012

234785

数据于2025-04-16公开中

PDB statisticsPDBj update infoContact PDBjnumon