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PDB: 1201 results

5EBA
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BU of 5eba by Molmil
Crystal structure of aromatic mutant (Y343A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Beta-xylanase, MAGNESIUM ION, SODIUM ION
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2015-10-18
Release date:2016-10-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of aromatic mutant (Y343A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
To Be Published
4QDM
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BU of 4qdm by Molmil
Crystal structure of N-terminal mutant (V1L) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Alkaline thermostable endoxylanase, GLYCEROL, MAGNESIUM ION, ...
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2014-05-14
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.964 Å)
Cite:Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)8-triosephosphate isomerase barrel enzyme
Febs J., 282, 2015
8DI5
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BU of 8di5 by Molmil
Cryo-EM structure of SARS-CoV-2 Beta (B.1.351) spike protein in complex with VH domain F6 (focused refinement of RBD and VH F6)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, VH F6
Authors:Zhu, X, Saville, J.W, Mannar, D, Berezuk, A.M, Subramaniam, S.
Deposit date:2022-06-28
Release date:2022-08-24
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Potent and broad neutralization of SARS-CoV-2 variants of concern (VOCs) including omicron sub-lineages BA.1 and BA.2 by biparatopic human VH domains.
Iscience, 25, 2022
4QE8
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BU of 4qe8 by Molmil
FXR with DM175 and NCoA-2 peptide
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 4-({2-[(4-tert-butylbenzoyl)amino]benzoyl}amino)benzoic acid, ...
Authors:Kudlinzki, D, Merk, D, Linhard, V.L, Saxena, K, Sreeramulu, S, Nilsson, E, Dekker, N, Wissler, L, Bamberg, K, Schubert-Zsilavecz, M, Schwalbe, H.
Deposit date:2014-05-15
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:FXR with DM175 and NCoA-2 peptide
To be Published
4QCE
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BU of 4qce by Molmil
Crystal structure of recombinant alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Alkaline thermostable endoxylanase, MAGNESIUM ION, SODIUM ION
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2014-05-11
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)8-triosephosphate isomerase barrel enzyme
Febs J., 282, 2015
4QCF
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BU of 4qcf by Molmil
Crystal structure of N-terminal mutant (V1A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Alkaline thermostable endoxylanase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2014-05-11
Release date:2015-05-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (beta/alpha)8-triosephosphate isomerase barrel enzyme
Febs J., 282, 2015
5VKR
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BU of 5vkr by Molmil
Horse liver alcohol dehydrogenase complexed with adenosine-5-diphosphoribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Alcohol dehydrogenase E chain, ZINC ION
Authors:Plapp, B.V, Rubach, J.K, Ramaswamy, S.
Deposit date:2017-04-22
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Horse Liver Alcohol Dehydrogenase: Zinc Coordination and Catalysis.
Biochemistry, 56, 2017
5VOC
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BU of 5voc by Molmil
Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 - Low resolution dataset for initial phasing by SAD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein H, Envelope glycoprotein L, ...
Authors:Malito, E, Chandramouli, S.
Deposit date:2017-05-02
Release date:2017-07-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.99 Å)
Cite:Structural basis for potent antibody-mediated neutralization of human cytomegalovirus.
Sci Immunol, 2, 2017
8EDZ
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BU of 8edz by Molmil
The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ000986319
Descriptor: Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Cuypers, M.G, Slavish, J.P, Jayaraman, S, Rankovic, Z, White, S.W.
Deposit date:2022-09-06
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with compound SJ000986319
To Be Published
5EFD
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BU of 5efd by Molmil
Crystal structure of a surface pocket creating mutant (W6A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: 1,2-ETHANEDIOL, Beta-xylanase, CHLORIDE ION, ...
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2015-10-23
Release date:2016-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.674 Å)
Cite:Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches.
J.Chem.Inf.Model., 2021
4QVK
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BU of 4qvk by Molmil
Apo-crystal structure of Podospora anserina methyltransferase PaMTH1
Descriptor: 1,2-ETHANEDIOL, PaMTH1 Methyltransferase
Authors:Kudlinzki, D, Linhard, V.L, Chatterjee, D, Saxena, K, Sreeramulu, S, Schwalbe, H.
Deposit date:2014-07-15
Release date:2015-05-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure and Biophysical Characterization of the S-Adenosylmethionine-dependent O-Methyltransferase PaMTH1, a Putative Enzyme Accumulating during Senescence of Podospora anserina.
J.Biol.Chem., 290, 2015
5XC1
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BU of 5xc1 by Molmil
Crystal structure of the complex of an aromatic mutant (W6A) of an alkali thermostable GH10 Xylanase from Bacillus sp. NG-27 with S-1,2-Propanediol
Descriptor: Beta-xylanase, MAGNESIUM ION, S-1,2-PROPANEDIOL, ...
Authors:Bansia, H, Mahanta, P, Ramakumar, S.
Deposit date:2017-03-21
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches.
J.Chem.Inf.Model., 2021
5EFF
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BU of 5eff by Molmil
Crystal structure of an aromatic mutant (F4A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Descriptor: Beta-xylanase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Mahanta, P, Bhardwaj, A, Reddy, V.S, Ramakumar, S.
Deposit date:2015-10-23
Release date:2016-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structure of an aromatic mutant (F4A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
To Be Published
4QKK
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BU of 4qkk by Molmil
Crystal structure of an oligonucleotide containing 5-formylcytosine
Descriptor: DNA (5'-D(*CP*TP*AP*(5FC)P*GP*(5FC)P*GP*(5FC)P*GP*TP*AP*G)-3')
Authors:Raiber, E.-A, Murat, P, Chirgadze, D.Y, Luisi, B.F, Balasubramanian, S.
Deposit date:2014-06-06
Release date:2014-12-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:5-Formylcytosine alters the structure of the DNA double helix.
Nat.Struct.Mol.Biol., 22, 2015
4S35
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BU of 4s35 by Molmil
AMPPCP and TMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
Deposit date:2015-01-26
Release date:2016-01-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate.
Febs J., 284, 2017
5ZKA
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BU of 5zka by Molmil
Crystal structure of N-acetylneuraminate lyase from Fusobacterium nucleatum complexed with Pyruvate
Descriptor: 1,2-ETHANEDIOL, N-acetylneuraminate lyase, TRIETHYLENE GLYCOL
Authors:Kumar, J.P, Rao, H, Nayak, V, Ramaswamy, S.
Deposit date:2018-03-23
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structures and kinetics of N-acetylneuraminate lyase from Fusobacterium nucleatum
Acta Crystallogr F Struct Biol Commun, 74, 2018
6I5J
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BU of 6i5j by Molmil
Crystal structure of SOCS2:Elongin C:Elongin B in complex with growth hormone receptor peptide
Descriptor: COBALT (II) ION, Elongin-B, Elongin-C, ...
Authors:Kung, W.W, Ramachandran, S, Makukhin, N, Bruno, E, Ciulli, A.
Deposit date:2018-11-13
Release date:2019-05-29
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into substrate recognition by the SOCS2 E3 ubiquitin ligase.
Nat Commun, 10, 2019
5ZXE
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BU of 5zxe by Molmil
Structure of a consensus sequence derived from the FGF family
Descriptor: CHLORIDE ION, Consensus sequence based basic form of fibroblast growth factor, GLYCEROL, ...
Authors:Tripathi, S.K, Mandalaparthy, V, Ramaswamy, S, Gosavi, S.
Deposit date:2018-05-19
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of a consensus sequence derived from the FGF family
To be published
6JDC
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BU of 6jdc by Molmil
Crystal structure of N-acetyl mannosmaine kinase in complex with ManNAc from Haemophilus influenzae
Descriptor: 2-acetamido-2-deoxy-alpha-D-mannopyranose, N-acetylmannosamine kinase, ZINC ION
Authors:Thanuja, G, Ramaswamy, S.
Deposit date:2019-02-01
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.271 Å)
Cite:Structure and Function of N‐Acetylmannosamine Kinases from Pathogenic Bacteria.
Acs Omega, 5, 2020
6JDO
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BU of 6jdo by Molmil
Crystal structure of N-acetyl mannosmaine kinase with AMP-PNP from Pasteurella multocida
Descriptor: CALCIUM ION, N-acetylmannosamine kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Thanuja, G, Ramaswamy, S.
Deposit date:2019-02-02
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structure and Function of N‐Acetylmannosamine Kinases from Pathogenic Bacteria.
Acs Omega, 5, 2020
6JDA
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BU of 6jda by Molmil
Crystal structure of N-acetyl mannosmaine kinase in complex with N-acetylmannosamine in Pasteurella multocida
Descriptor: 2-acetamido-2-deoxy-alpha-D-mannopyranose, GLYCEROL, N-acetylmannosamine kinase, ...
Authors:Thanuja, G, Ramaswamy, S.
Deposit date:2019-01-31
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and Function of N‐Acetylmannosamine Kinases from Pathogenic Bacteria.
Acs Omega, 5, 2020
6JDB
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BU of 6jdb by Molmil
Crystal structure of N-acetyl mannosmaine kinase in complex with ManNAc-6P and ADP from Haemophilus influenzae
Descriptor: 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, ADENOSINE-5'-DIPHOSPHATE, N-acetylmannosamine kinase, ...
Authors:Thanuja, G, Ramaswamy, S.
Deposit date:2019-02-01
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure and Function of N‐Acetylmannosamine Kinases from Pathogenic Bacteria.
Acs Omega, 5, 2020
6ID6
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BU of 6id6 by Molmil
Crystal structure of Rv0731c from Mycobacterium tuberculosis at 1.63 Angstroms.
Descriptor: MAGNESIUM ION, Putative S-adenosyl-L-methionine-dependent methyltransferase Rv0731c, TRIETHYLENE GLYCOL
Authors:Bansia, H, Kalladi, S.M, Nagaraja, V, Ramakumar, S.
Deposit date:2018-09-08
Release date:2019-09-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of Rv0731c from Mycobacterium tuberculosis.
To Be Published
6JDH
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BU of 6jdh by Molmil
Crystal structure of N-acetyl mannosmaine kinase from Pasteurella multocida
Descriptor: GLYCEROL, N-acetylmannosamine kinase, ZINC ION
Authors:Thanuja, G, Ramaswamy, S.
Deposit date:2019-02-01
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Function of N‐Acetylmannosamine Kinases from Pathogenic Bacteria.
Acs Omega, 5, 2020
6CGV
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BU of 6cgv by Molmil
Revised crystal structure of human adenovirus
Descriptor: Hexon protein, Hexon-interlacing protein, Penton protein, ...
Authors:Natchiar, S.K, Venkataraman, S, Nemerow, G.R, Reddy, V.S.
Deposit date:2018-02-21
Release date:2018-04-25
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Revised Crystal Structure of Human Adenovirus Reveals the Limits on Protein IX Quasi-Equivalence and on Analyzing Large Macromolecular Complexes.
J. Mol. Biol., 430, 2018

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PDB entries from 2024-08-21

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