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PDB: 52 results

6W3S
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BU of 6w3s by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-leucine
Descriptor: GLYCEROL, LEUCINE, Methyl-accepting chemotaxis protein, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
6W3V
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BU of 6w3v by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-phenylalanine
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein, PHENYLALANINE, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
6W3X
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BU of 6w3x by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-valine
Descriptor: GLYCEROL, Methyl-accepting chemotaxis protein, SULFATE ION, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
6W3T
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BU of 6w3t by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-norvaline
Descriptor: GLYCEROL, Methyl-accepting chemotaxis protein, NORVALINE, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
5GIZ
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BU of 5giz by Molmil
Periplasmic heme-binding protein BhuT in apo form
Descriptor: CHLORIDE ION, Putative hemin transport system, substrate-binding protein, ...
Authors:Nakamura, N, Naoe, Y, Rahman, M.M, Shiro, Y, Sugimoto, H.
Deposit date:2016-06-26
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for binding and transfer of heme in bacterial heme-acquisition systems.
Proteins, 85, 2017
5LN8
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BU of 5ln8 by Molmil
Crystal structure of self-complemented MyfA, the major subunit of Myf fimbriae from Yersinia enterocolitica, in complex with galactose
Descriptor: Fimbrial protein MyfA,Fimbrial protein MyfA, beta-D-galactopyranose
Authors:Pakharukova, N.A, Roy, S, Rahman, M.M, Tuitilla, M, Zavialov, A.V.
Deposit date:2016-08-03
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for Myf and Psa fimbriae-mediated tropism of pathogenic strains of Yersinia for host tissues.
Mol.Microbiol., 102, 2016
5LN4
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BU of 5ln4 by Molmil
Crystal structure of self-complemented PsaA, the major subunit of pH 6 antigen from Yersinia pests, in complex with choline
Descriptor: CHOLINE ION, pH 6 antigen,pH 6 antigen
Authors:Pakharukova, N.A, Roy, S, Rahman, M.M, Tuitilla, M, Zavialov, A.V.
Deposit date:2016-08-03
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural basis for Myf and Psa fimbriae-mediated tropism of pathogenic strains of Yersinia for host tissues.
Mol.Microbiol., 102, 2016
1I71
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BU of 1i71 by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF APOLIPOPROTEIN(A) KRINGLE IV TYPE 7: INSIGHTS INTO LIGAND BINDING
Descriptor: APOLIPOPROTEIN(A), SULFATE ION
Authors:Ye, Q, Rahman, M.N, Koschinsky, M.L, Jia, Z.
Deposit date:2001-03-07
Release date:2001-06-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-resolution crystal structure of apolipoprotein(a) kringle IV type 7: insights into ligand binding.
Protein Sci., 10, 2001
6W3R
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BU of 6w3r by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with 3-methylisoleucine
Descriptor: 3-methyl-L-alloisoleucine, CHLORIDE ION, Methyl-accepting chemotaxis protein, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
6W3Y
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BU of 6w3y by Molmil
Crystal structure of ligand-binding domain of Campylobacter jejuni chemoreceptor Tlp3 in complex with L-alanine
Descriptor: ALANINE, CHLORIDE ION, GLYCEROL, ...
Authors:Khan, M.F, Machuca, M.A, Rahman, M.M, Roujeinikova, A.
Deposit date:2020-03-09
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure-Activity Relationship Study Reveals the Molecular Basis for Specific Sensing of Hydrophobic Amino Acids by theCampylobacter jejuniChemoreceptor Tlp3.
Biomolecules, 10, 2020
5Y8A
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BU of 5y8a by Molmil
Periplasmic heme-binding protein BhuT in complex with two hemes (holo-2 form)
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Putative hemin transport system, ...
Authors:Nakamura, N, Naoe, Y, Rahman, M.M, Shiro, Y, Sugimoto, H.
Deposit date:2017-08-20
Release date:2017-10-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for binding and transfer of heme in bacterial heme-acquisition systems
Proteins, 85, 2017
2LXE
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BU of 2lxe by Molmil
S4wyild
Descriptor: Histone-lysine N-methyltransferase SUVR4
Authors:Kristiansen, P, Rahman, M.A, Aalen, R.B.
Deposit date:2012-08-20
Release date:2013-11-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The arabidopsis histone methyltransferase SUVR4 binds ubiquitin via a domain with a four-helix bundle structure.
Biochemistry, 53, 2014
5Y89
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BU of 5y89 by Molmil
Periplasmic heme-binding protein BhuT in complex with one heme (holo-1)
Descriptor: ACETATE ION, PROTOPORPHYRIN IX CONTAINING FE, Putative hemin transport system, ...
Authors:Naoe, Y, Nakamura, N, Rahman, M.M, Shiro, Y, Sugimoto, H.
Deposit date:2017-08-20
Release date:2017-10-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for binding and transfer of heme in bacterial heme-acquisition systems
Proteins, 85, 2017
8UPI
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BU of 8upi by Molmil
Structure of a periplasmic peptide binding protein from Mesorhizobium sp. AP09 bound to aminoserine
Descriptor: 1,2-ETHANEDIOL, AMINOSERINE, CALCIUM ION, ...
Authors:Frkic, R.L, Smith, O.B, Rahman, M, Kaczmarski, J.A, Jackson, C.J.
Deposit date:2023-10-22
Release date:2023-11-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Identification and Characterization of a Bacterial Periplasmic Solute Binding Protein That Binds l-Amino Acid Amides.
Biochemistry, 63, 2024
8ESK
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BU of 8esk by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with rocuronium, resting-like state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-10-14
Release date:2023-06-07
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8F6Y
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BU of 8f6y by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with etomidate, desensitized-like state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-11-17
Release date:2023-06-07
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8F6Z
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BU of 8f6z by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with succinylcholine, desensitized-like state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2,2'-[(1,4-DIOXOBUTANE-1,4-DIYL)BIS(OXY)]BIS(N,N,N-TRIMETHYLETHANAMINIUM), 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-11-17
Release date:2023-06-07
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
8F2S
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BU of 8f2s by Molmil
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with rocuronium, pore-blocked state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goswami, U, Rahman, M.M, Teng, J, Hibbs, R.E.
Deposit date:2022-11-08
Release date:2023-06-07
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural interplay of anesthetics and paralytics on muscle nicotinic receptors.
Nat Commun, 14, 2023
7W7A
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BU of 7w7a by Molmil
Heme exporter in complex with Mn-containing protoporphyrin IX, Mn-anomalous data
Descriptor: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shirouzu, M, Shiro, Y.
Deposit date:2021-12-04
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W7D
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BU of 7w7d by Molmil
Heme exporter HrtBA in complex with heme
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative ABC transport system integral membrane protein, Putative ABC transport system, ...
Authors:Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shiro, Y, Shirouzu, M.
Deposit date:2021-12-04
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W7B
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BU of 7w7b by Molmil
Heme exporter HrtBA in complex with protoporphyrin IX containing manganese(III), high resolution data
Descriptor: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, DI(HYDROXYETHYL)ETHER, PROTOPORPHYRIN IX CONTAINING MN, ...
Authors:Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shirouzu, M, Shiro, Y.
Deposit date:2021-12-04
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
3CZY
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BU of 3czy by Molmil
Crystal Structure of Human Heme Oxygenase-1 in Complex with 1-(Adamantan-1-yl)-2-(1H-imidazol-1-yl)ethanone
Descriptor: 1-(adamantan-1-yl)-2-(1H-imidazol-1-yl)ethanone, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jia, Z, Rahman, M.N.
Deposit date:2008-04-30
Release date:2008-09-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:X-ray crystal structure of human heme oxygenase-1 in complex with 1-(adamantan-1-yl)-2-(1H-imidazol-1-yl)ethanone: a common binding mode for imidazole-based heme oxygenase-1 inhibitors.
J.Med.Chem., 51, 2008
7W79
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BU of 7w79 by Molmil
Heme exporter HrtBA in complex with Mn-AMPPNP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Putative ABC transport system integral membrane protein, ...
Authors:Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shirouzu, M, Shiro, Y.
Deposit date:2021-12-04
Release date:2022-06-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W78
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BU of 7w78 by Molmil
Heme exporter HrtBA in complex with Mg-AMPPNP
Descriptor: ACETATE ION, DODECANE, GLYCEROL, ...
Authors:Hisano, T, Nakamura, H, Rahman, M.M, Tosha, T, Shirouzu, M, Shiro, Y.
Deposit date:2021-12-04
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.884 Å)
Cite:Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria.
Proc.Natl.Acad.Sci.USA, 119, 2022
4B9G
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BU of 4b9g by Molmil
Structure of CssB subunit complemented with donor strand from CssA subunit of enterotoxigenic Escherichia coli colonization factor CS6
Descriptor: CS6 FIMBRIAL SUBUNIT B, CS6 FIMBRIAL SUBUNIT A
Authors:Roy, S.P, Rahman, M.M, Yu, X.D, Tuittila, M, Knight, S.D, Zavialov, A.V.
Deposit date:2012-09-04
Release date:2012-11-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Crystal Structure of Enterotoxigenic Escherichia Coli Colonization Factor Cs6 Reveals a Novel Type of Functional Assembly.
Mol.Microbiol., 86, 2012

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