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PDB: 818 results

1PZR
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Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS2 and DEBS3: the B domain
Descriptor: Erythronolide synthase
Authors:Broadhurst, R.W, Nietlispach, D, Wheatcroft, M.P, Leadlay, P.F, Weissman, K.J.
Deposit date:2003-07-14
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of docking domains in modular polyketide synthases.
Chem.Biol., 10, 2003
4D4X
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Nitrosyl complex of the D121I variant of cytochrome c prime from Alcaligenes xylosoxidans
Descriptor: CYTOCHROME C', HEME C, NITRIC OXIDE
Authors:Gahfoor, D.D, Kekilli, D, Abdullah, G.H, Dworkowski, F.S.N, Hassan, H.G, Wilson, M.T, Hough, M.A, Strange, R.W.
Deposit date:2014-10-31
Release date:2015-09-09
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Hydrogen Bonding of the Dissociated Histidine Ligand is not Required for Formation of a Proximal No Adduct in Cytochrome C'.
J.Biol.Inorg.Chem., 20, 2015
1PZQ
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Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS 2 and DEBS 3: The A domain
Descriptor: Erythronolide synthase
Authors:Broadhurst, R.W, Nietlispach, D, Wheatcroft, M.P, Leadlay, P.F, Weissman, K.J.
Deposit date:2003-07-14
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of docking domains in modular polyketide synthases.
Chem.Biol., 10, 2003
3ZDP
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BU of 3zdp by Molmil
R416A Monomeric nucleoprotein of influenza A virus
Descriptor: NUCLEOCAPSID PROTEIN, POTASSIUM ION
Authors:Chenavas, S, Ruigrok, R.W.H, Crepin, T.
Deposit date:2012-11-29
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Monomeric Nucleoprotein of Influenza a Virus.
Plos Pathog., 9, 2013
4CGX
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Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 1)
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-11-27
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
1PPO
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BU of 1ppo by Molmil
DETERMINATION OF THE STRUCTURE OF PAPAYA PROTEASE OMEGA
Descriptor: MERCURY (II) ION, PROTEASE OMEGA
Authors:Pickersgill, R.W, Rizkallah, P.J, Harris, G.W, Goodenough, P.W.
Deposit date:1991-07-12
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Determination of the Structure of Papaya Protease Omega
Acta Crystallogr.,Sect.B, 47, 1991
4AWH
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BU of 4awh by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with rUMP
Descriptor: MANGANESE (II) ION, POLYMERASE PA, URIDINE-5'-MONOPHOSPHATE
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-06-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AVL
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BU of 4avl by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with dTMP
Descriptor: MANGANESE (II) ION, POLYMERASE PA, THYMIDINE-5'-PHOSPHATE
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H.J, Ruigrok, R.W.H, Cusack, S.
Deposit date:2012-05-28
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
1RZM
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BU of 1rzm by Molmil
Crystal structure of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHPS) from Thermotoga maritima complexed with Cd2+, PEP and E4P
Descriptor: CADMIUM ION, ERYTHOSE-4-PHOSPHATE, PHOSPHOENOLPYRUVATE, ...
Authors:Shumilin, I.A, Bauerle, R, Wu, J, Woodard, R.W, Kretsinger, R.H.
Deposit date:2003-12-24
Release date:2004-08-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Reaction Complex of 3-Deoxy-d-arabino-heptulosonate-7-phosphate Synthase from Thermotoga maritima Refines the Catalytic Mechanism and Indicates a New Mechanism of Allosteric Regulation.
J.Mol.Biol., 341, 2004
4CGS
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BU of 4cgs by Molmil
Crystal structure of the N-terminal domain of the PA subunit of Dhori virus polymerase
Descriptor: GLYCEROL, POLYMERASE SUBUNIT PA
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-11-26
Release date:2014-02-05
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
4CHF
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BU of 4chf by Molmil
Crystal structure of the putative cap-binding domain of the PB2 subunit of Thogoto virus polymerase (form 2)
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
1SDV
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BU of 1sdv by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
3ZDO
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BU of 3zdo by Molmil
Tetramerization domain of Measles virus phosphoprotein
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, PHOSPHOPROTEIN
Authors:Communie, G, Crepin, T, Jensen, M.R, Blackledge, M, Ruigrok, R.W.H.
Deposit date:2012-11-29
Release date:2013-04-24
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure of the Tetramerization Domain of Measles Virus Phosphoprotein.
J.Virol., 87, 2013
4D6T
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BU of 4d6t by Molmil
Cytochrome bc1 bound to the 4(1H)-pyridone GW844520
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 3-chloro-2,6-dimethyl-5-{4-[4-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-ol, CARDIOLIPIN, ...
Authors:Capper, M.J, O'Neill, P.M, Fisher, N, Strange, R.W, Moss, D, Ward, S.A, Berry, N.G, Lawrenson, A.S, Hasnain, S.S, Biagini, G.A, Antonyuk, S.V.
Deposit date:2014-11-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.57 Å)
Cite:Antimalarial 4(1H)-Pyridones Bind to the Qi Site of Cytochrome Bc1.
Proc.Natl.Acad.Sci.USA, 112, 2015
4CBT
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BU of 4cbt by Molmil
Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease
Descriptor: (1R,2R,3R)-2-[4-(5-fluoranylpyrimidin-2-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, ZINC ION
Authors:Burli, R.W, Luckhurst, C.A, Aziz, O, Matthews, K.L, Yates, D, Lyons, K.A, Beconi, M, McAllister, G, Breccia, P, Stott, A.J, Penrose, S.D, Wall, M, Lamers, M, Leonard, P, Mueller, I, Richardson, C.M, Jarvis, R, Stones, L, Hughes, S, Wishart, G, Haughan, A.F, O'Connell, C, Mead, T, McNeil, H, Vann, J, Mangette, J, Maillard, M, Beaumont, V, Munoz-Sanjuan, I, Dominguez, C.
Deposit date:2013-10-16
Release date:2013-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Design, synthesis, and biological evaluation of potent and selective class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease.
J. Med. Chem., 56, 2013
4CBY
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BU of 4cby by Molmil
Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease
Descriptor: (1R,2R,3R)-2-[4-(1,3-oxazol-5-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, SODIUM ION, ...
Authors:Burli, R.W, Luckhurst, C.A, Aziz, O, Matthews, K.L, Yates, D, Lyons, K.A, Beconi, M, McAllister, G, Breccia, P, Stott, A.J, Penrose, S.D, Wall, M, Lamers, M, Leonard, P, Mueller, I, Richardson, C.M, Jarvis, R, Stones, L, Hughes, S, Wishart, G, Haughan, A.F, O'Connell, C, Mead, T, McNeil, H, Vann, J, Mangette, J, Maillard, M, Beaumont, V, Munoz-Sanjuan, I, Dominguez, C.
Deposit date:2013-10-17
Release date:2013-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Design, synthesis, and biological evaluation of potent and selective class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease.
J. Med. Chem., 56, 2013
4D6U
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BU of 4d6u by Molmil
Cytochrome bc1 bound to the 4(1H)-pyridone GSK932121
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 3-chloro-6-(hydroxymethyl)-2-methyl-5-{4-[3-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-ol, CARDIOLIPIN, ...
Authors:Capper, M.J, ONeill, P.M, Fisher, N, Strange, R.W, Moss, D, Ward, S.A, Berry, N.G, Lawrenson, A.S, Hasnain, S.S, Biagini, G.A, Antonyuk, S.V.
Deposit date:2014-11-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.09 Å)
Cite:Antimalarial 4(1H)-Pyridones Bind to the Qi Site of Cytochrome Bc1.
Proc.Natl.Acad.Sci.USA, 112, 2015
1QIB
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BU of 1qib by Molmil
CRYSTAL STRUCTURE OF GELATINASE A CATALYTIC DOMAIN
Descriptor: 72 kDa type IV collagenase, CALCIUM ION, ZINC ION
Authors:Dhanaraj, V, Williams, M.G, Ye, Q.-Z, Molina, F, Johnson, L.L, Ortwine, D.F, Pavlovsky, A, Rubin, J.R, Skeean, R.W, White, A.D, Humblet, C, Hupe, D.J, Blundell, T.L.
Deposit date:1999-06-11
Release date:1999-11-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray structure of gelatinase A catalytic domain complexed with a hydroxamate inhibitor
Croatica Chemica Acta, 72, 1999
4CHE
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BU of 4che by Molmil
Crystal structure of the putative cap-binding domain of the PB2 subunit of Thogoto virus polymerase
Descriptor: POLYMERASE BASIC PROTEIN 2
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
1Q7D
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BU of 1q7d by Molmil
Structure of the integrin alpha2beta1 binding collagen peptide
Descriptor: collagen alfa 1(I) chain peptide GPOGPOGFOGERGPOGPOGPO
Authors:Emsley, J, Knight, C.G, Farndale, R.W, Barnes, M.J.
Deposit date:2003-08-18
Release date:2004-01-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Integrin alpha2beta1-binding Collagen Peptide.
J.Mol.Biol., 335, 2004
1SDT
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BU of 1sdt by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, protease RETROPEPSIN
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
1SDU
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BU of 1sdu by Molmil
Crystal structures of HIV protease V82A and L90M mutants reveal changes in indinavir binding site.
Descriptor: ACETATE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, SULFATE ION, ...
Authors:Mahalingam, B, Wang, Y.-F, Boross, P.I, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2004-02-14
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structures of HIV protease V82A and L90M mutants reveal changes in the indinavir-binding site
Eur.J.Biochem., 271, 2004
1PSI
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BU of 1psi by Molmil
Intact recombined alpha1-antitrypsin mutant PHE 51 to LEU
Descriptor: ALPHA=1=-ANTITRYPSIN
Authors:Abrahams, J.P, Elliott, P.R, Lomas, D.A, Carrell, R.W.
Deposit date:1996-06-11
Release date:1996-12-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Inhibitory conformation of the reactive loop of alpha 1-antitrypsin.
Nat.Struct.Biol., 3, 1996
1PIC
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BU of 1pic by Molmil
PHOSPHATIDYLINOSITOL 3-KINASE, P85-ALPHA SUBUNIT: C-TERMINAL SH2 DOMAIN COMPLEXED WITH A TYR751 PHOSPHOPEPTIDE FROM THE PDGF RECEPTOR, NMR, MINIMIZED MEAN STRUCTURE
Descriptor: BETA-PLATELET-DERIVED GROWTH FACTOR RECEPTOR, PHOSPHATIDYLINOSITOL 3-KINASE
Authors:Breeze, A.L, Kara, B.V, Barratt, D.G, Anderson, M, Smith, J.C, Luke, R.W, Best, J.R, Cartlidge, S.A.
Deposit date:1997-06-23
Release date:1997-09-17
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of a specific peptide complex of the carboxy-terminal SH2 domain from the p85 alpha subunit of phosphatidylinositol 3-kinase.
EMBO J., 15, 1996
1SP2
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BU of 1sp2 by Molmil
NMR STRUCTURE OF A ZINC FINGER DOMAIN FROM TRANSCRIPTION FACTOR SP1F2, MINIMIZED AVERAGE STRUCTURE
Descriptor: SP1F2, ZINC ION
Authors:Narayan, V.A, Kriwacki, R.W, Caradonna, J.P.
Deposit date:1996-11-21
Release date:1997-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of zinc finger domains from transcription factor Sp1. Insights into sequence-specific protein-DNA recognition.
J.Biol.Chem., 272, 1997

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