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PDB: 818 results

2B1Z
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BU of 2b1z by Molmil
Human estrogen receptor alpha ligand-binding domain in complex with 17methyl-17alpha-dihydroequilenin and a glucoc interacting protein 1 NR box II peptide
Descriptor: 17-METHYL-17-ALPHA-DIHYDROEQUILENIN, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2005-09-16
Release date:2006-09-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Molecular characterization of a B-ring unsaturated estrogen: implications for conjugated equine estrogen components of premarin.
Steroids, 73, 2008
2K41
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BU of 2k41 by Molmil
NMR structure of uridine bulged RNA duplex
Descriptor: RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_, RNA_(5'-R(*GP*UP*CP*GP*UP*GP*CP*UP*G)-3')_
Authors:Popenda, L, Bielecki, L, Gdaniec, Z, Adamiak, R.W.
Deposit date:2008-05-26
Release date:2008-11-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of adenosine bulged RNA duplex reveals formation of the dinucleotide platform in the C:G-A triple
ARKIVOC, 2009, 2008
2AOE
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BU of 2aoe by Molmil
crystal structure analysis of HIV-1 protease mutant V82A with a substrate analog CA-P2
Descriptor: ACETIC ACID, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2K3Z
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BU of 2k3z by Molmil
NMR structure of adenosine bulged RNA duplex with C:G-A triple
Descriptor: RNA_(5'-R(*CP*AP*GP*CP*CP*GP*AP*C)-3')_, RNA_(5'-R(*GP*UP*CP*GP*AP*GP*CP*UP*G)-3')_
Authors:Popenda, L, Bielecki, L, Gdaniec, Z, Adamiak, R.W.
Deposit date:2008-05-26
Release date:2008-11-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of adenosine bulged RNA duplex reveals formation of the dinucleotide platform in the C:G-A triple
ARKIVOC, 2009, 2008
2JXQ
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BU of 2jxq by Molmil
NMR structure of RNA duplex
Descriptor: RNA (5'-R(*CP*GP*CP*UP*CP*UP*CP*UP*GP*C)-3'), RNA (5'-R(*GP*CP*AP*GP*AP*GP*AP*GP*CP*G)-3')
Authors:Popenda, L, Adamiak, R.W, Gdaniec, Z.
Deposit date:2007-11-28
Release date:2008-05-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Bulged adenosine influence on the RNA duplex conformation in solution.
Biochemistry, 47, 2008
2BDO
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BU of 2bdo by Molmil
SOLUTION STRUCTURE OF HOLO-BIOTINYL DOMAIN FROM ACETYL COENZYME A CARBOXYLASE OF ESCHERICHIA COLI DETERMINED BY TRIPLE-RESONANCE NMR SPECTROSCOPY
Descriptor: BIOTIN, PROTEIN (ACETYL-COA CARBOXYLASE)
Authors:Roberts, E.L, Shu, N, Howard, M.J, Broadhurst, R.W, Chapman-Smith, A, Wallace, J.C, Morris, T, Cronan, J.E, Perham, R.N.
Deposit date:1999-03-03
Release date:1999-04-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structures of apo and holo biotinyl domains from acetyl coenzyme A carboxylase of Escherichia coli determined by triple-resonance nuclear magnetic resonance spectroscopy.
Biochemistry, 38, 1999
2ANT
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BU of 2ant by Molmil
THE 2.6 A STRUCTURE OF ANTITHROMBIN INDICATES A CONFORMATIONAL CHANGE AT THE HEPARIN BINDING SITE
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose, ANTITHROMBIN
Authors:Skinner, R, Abrahams, J.-P, Whisstock, J.C, Lesk, A.M, Carrell, R.W, Wardell, M.R.
Deposit date:1997-01-28
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The 2.6 A structure of antithrombin indicates a conformational change at the heparin binding site.
J.Mol.Biol., 266, 1997
2AVV
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BU of 2avv by Molmil
Kinetics, stability, and structural changes in high resolution crystal structures of HIV-1 protease with drug resistant mutations L24I, I50V, and G73S
Descriptor: ACETIC ACID, CHLORIDE ION, N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, ...
Authors:Liu, F, Boross, P.I, Wang, Y.F, Tozser, J, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-30
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Kinetic, stability, and structural changes in high-resolution crystal structures of HIV-1 protease with drug-resistant mutations L24I, I50V, and G73S.
J.Mol.Biol., 354, 2005
2AOF
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BU of 2aof by Molmil
Crystal structure analysis of HIV-1 Protease mutant V82A with a substrate analog P1-P6
Descriptor: ACETIC ACID, CHLORIDE ION, PEPTIDE INHIBITOR, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2B6A
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BU of 2b6a by Molmil
Crystal structure of HIV-1 reverse transcriptase (RT) in complex with THR-50
Descriptor: 1-(2,6-DIFLUOROBENZYL)-2-(2,6-DIFLUOROPHENYL)-4-METHYL-1H-BENZIMIDAZOLE, Reverse transcriptase p51 subunit, Reverse transcriptase p66 subunit
Authors:Morningstar, M.L, Roth, T, Smith, M.K, Zajac, M, Watson, K, Buckheit, R.W, Das, K, Zhang, W, Arnold, E, Michejda, C.J.
Deposit date:2005-09-30
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of HIV-1 reverse transcriptase (RT) in complex with THR-50
TO BE PUBLISHED
2AOI
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BU of 2aoi by Molmil
Crystal structure analysis of HIV-1 protease with a substrate analog P1-P6
Descriptor: PEPTIDE INHIBITOR, POL POLYPROTEIN, SULFATE ION
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
Deposit date:2005-08-12
Release date:2006-01-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2BO0
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BU of 2bo0 by Molmil
Crystal structure of the C130A mutant of nitrite reductase from Alcaligenes xylosoxidans
Descriptor: DISSIMILATORY COPPER-CONTAINING NITRITE REDUCTASE, TETRAETHYLENE GLYCOL, ZINC ION
Authors:Hough, M.A, Ellis, M.J, Antonyuk, S, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2005-04-06
Release date:2006-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High Resolution Structural Studies of Mutants Provide Insights Into Catalysis and Electron Transfer Processes in Copper Nitrite Reductase
J.Mol.Biol., 350, 2005
2N0W
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BU of 2n0w by Molmil
Mdmx-SJ212
Descriptor: 4-({(4S,5R)-4-(5-bromo-2-fluorophenyl)-5-(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one, Protein Mdm4
Authors:Grace, C.R, Kriwacki, R.W.
Deposit date:2015-03-17
Release date:2016-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Monitoring Ligand-Induced Protein Ordering in Drug Discovery.
J.Mol.Biol., 428, 2016
2N06
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BU of 2n06 by Molmil
Mdmx-298
Descriptor: 4-[[(4S,5R)-5-(4-chlorophenyl)-4-(3-methoxyphenyl)-2-(4-methoxy-2-propan-2-yloxy-phenyl)-4,5-dihydroimidazol-1-yl]carbonyl]piperazin-2-one, Protein Mdm4
Authors:Grace, C.R, Kriwacki, R.W.
Deposit date:2015-03-04
Release date:2016-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Monitoring Ligand-Induced Protein Ordering in Drug Discovery.
J.Mol.Biol., 428, 2016
1YC6
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BU of 1yc6 by Molmil
Crystallographic Structure of the T=1 Particle of Brome Mosaic Virus
Descriptor: Coat protein
Authors:Larson, S.B, Lucas, R.W, McPherson, A.
Deposit date:2004-12-22
Release date:2005-01-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic structure of the T=1 particle of brome mosaic virus.
J.Mol.Biol., 346, 2005
2JLP
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BU of 2jlp by Molmil
Crystal structure of human extracellular copper-zinc superoxide dismutase.
Descriptor: COPPER (II) ION, EXTRACELLULAR SUPEROXIDE DISMUTASE (CU-ZN), THIOCYANATE ION, ...
Authors:Antonyuk, S.V, Strange, R.W, Marklund, S.L, Hasnain, S.S.
Deposit date:2008-09-14
Release date:2009-03-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Human Extracellular Copper-Zinc Superoxide Dismutase at 1.7 A Resolution: Insights Into Heparin and Collagen Binding.
J.Mol.Biol., 388, 2009
2JUG
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BU of 2jug by Molmil
Multienzyme Docking in Hybrid Megasynthetases
Descriptor: TubC protein
Authors:Richter, C.D, Nietlispach, D, Broadhurst, R.W, Weissman, K.J.
Deposit date:2007-08-24
Release date:2007-12-11
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Multienzyme docking in hybrid megasynthetases
Nat.Chem.Biol., 4, 2008
2K47
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BU of 2k47 by Molmil
Solution structure of the C-terminal N-RNA binding domain of the Vesicular Stomatitis Virus Phosphoprotein
Descriptor: Phosphoprotein
Authors:Ribeiro, E.A, Favier, A, Gerard, F.C, Leyrat, C, Brutscher, B, Blondel, D, Ruigrok, R.W, Blackledge, M, Jamin, M.
Deposit date:2008-05-28
Release date:2008-09-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the C-Terminal Nucleoprotein-RNA Binding Domain of the Vesicular Stomatitis Virus Phosphoprotein.
J.Mol.Biol., 2008
1XZ4
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BU of 1xz4 by Molmil
Intersubunit Interactions Associated with Tyr42alpha Stabilize the Quaternary-T Tetramer but are not Major Quaternary Constraints in Deoxyhemoglobin: alphaY42A deoxyhemoglobin no-salt
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kavanaugh, J.S, Rogers, P.H, Arnone, A, Hui, H.L, Wierzba, A, DeYoung, A, Kwiatkowski, L.D, Noble, R.W, Juszczak, L.J, Peterson, E.S, Friedman, J.M.
Deposit date:2004-11-11
Release date:2004-11-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intersubunit interactions associated with tyr42alpha stabilize the quaternary-T tetramer but are not major quaternary constraints in deoxyhemoglobin
Biochemistry, 44, 2005
1XYS
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BU of 1xys by Molmil
CATALYTIC CORE OF XYLANASE A E246C MUTANT
Descriptor: CALCIUM ION, XYLANASE A
Authors:Harris, G.W, Jenkins, J.A, Connerton, I, Pickersgill, R.W.
Deposit date:1994-09-02
Release date:1995-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the catalytic core of the family F xylanase from Pseudomonas fluorescens and identification of the xylopentaose-binding sites.
Structure, 2, 1994
2LBZ
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BU of 2lbz by Molmil
Thurincin H
Descriptor: Thuricin17
Authors:Sit, C.S, van Belkum, M.J, Mckay, R.T, Worobo, R.W, Vederas, J.C.
Deposit date:2011-04-10
Release date:2012-01-18
Last modified:2018-08-22
Method:SOLUTION NMR
Cite:The 3D solution structure of thurincin H, a bacteriocin with four sulfur to alpha-carbon crosslinks.
Angew.Chem.Int.Ed.Engl., 50, 2011
2C53
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BU of 2c53 by Molmil
A comparative study of uracil DNA glycosylases from human and herpes simplex virus type 1
Descriptor: 2'-DEOXYURIDINE, GLYCEROL, URACIL DNA GLYCOSYLASE
Authors:Krusong, K, Carpenter, E.P, Bellmy, S.R.W, Savva, R, Baldwin, G.S.
Deposit date:2005-10-25
Release date:2005-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Comparative Study of Uracil-DNA Glycosylases from Human and Herpes Simplex Virus Type 1.
J.Biol.Chem., 281, 2006
2C56
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A comparative study of uracil DNA glycosylases from human and herpes simplex virus type 1
Descriptor: URACIL DNA GLYCOSYLASE, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Krusong, K, Carpenter, E.P, Bellamy, S.R.W, Savva, R, Baldwin, G.S.
Deposit date:2005-10-26
Release date:2005-11-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Comparative Study of Uracil-DNA Glycosylases from Human and Herpes Simplex Virus Type 1.
J.Biol.Chem., 281, 2006
2N0U
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BU of 2n0u by Molmil
Mdmx-057
Descriptor: 4-[(4S,5R)-4-(3-chlorophenyl)-5-(4-chlorophenyl)-1-(3-oxidanylidenepiperazin-1-yl)carbonyl-4,5-dihydroimidazol-2-yl]-3-propan-2-yloxy-benzenecarbonitrile, Protein Mdm4
Authors:Grace, C.R, Kriwacki, R.W.
Deposit date:2015-03-17
Release date:2016-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Monitoring Ligand-Induced Protein Ordering in Drug Discovery.
J.Mol.Biol., 428, 2016
2BWI
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BU of 2bwi by Molmil
Atomic Resolution Structure of Nitrite -soaked Achromobacter cycloclastes Cu Nitrite Reductase
Descriptor: ACETATE ION, COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, ...
Authors:Antonyuk, S.V, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2005-07-14
Release date:2005-08-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic Resolution Structures of Resting-State, Substrate- and Product-Complexed Cu-Nitrite Reductase Provide Insight Into Catalytic Mechanism
Proc.Natl.Acad.Sci.USA, 102, 2005

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