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PDB: 818 results

4AWM
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Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with (-)-epigallocatechin gallate from green tea
Descriptor: (2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, MANGANESE (II) ION, POLYMERASE PA
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-06-04
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4AWK
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Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 1
Descriptor: (2Z)-4-[(3S)-1-(benzylsulfonyl)-3-(4-chlorobenzyl)piperidin-3-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-06-04
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
1NSD
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BU of 1nsd by Molmil
INFLUENZA B VIRUS NEURAMINIDASE CAN SYNTHESIZE ITS OWN INHIBITOR
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Burmeister, W.P, Ruigrok, R.W.H, Cusack, S.
Deposit date:1993-05-24
Release date:1993-10-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Influenza B virus neuraminidase can synthesize its own inhibitor.
Structure, 1, 1993
1QMW
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Solution structure of alpha-conotoxin SI
Descriptor: ALPHA-CONOTOXIN SI
Authors:Benie, A.J, Whitford, D, Hargittai, B, Barany, G, Janes, R.W.
Deposit date:1999-10-08
Release date:2000-08-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of Alpha-Conotoxin Si
FEBS Lett., 476, 2000
1QMD
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calcium bound closed form alpha-toxin from Clostridium perfringens
Descriptor: CALCIUM ION, PHOSPHOLIPASE C, ZINC ION
Authors:Naylor, C.E, Miller, J, Titball, R.W, Basak, A.K.
Deposit date:1999-09-27
Release date:2000-02-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterisation of the Calcium-Binding C-Terminal Domain of Clostridium Perfringens Alpha-Toxin
J.Mol.Biol., 294, 1999
1QM6
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Closed form of Clostridium perfringens alpha-toxin strain NCTC8237
Descriptor: PHOSPHOLIPASE C, ZINC ION
Authors:Naylor, C.E, Miller, J, Titball, R.W, Basak, A.K.
Deposit date:1999-09-21
Release date:1999-09-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterisation of the Calcium-Binding C-Terminal Domain of Clostridium Perfringens Alpha-Toxin
J.Mol.Biol., 294, 1999
1QMB
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Cleaved alpha-1-antitrypsin polymer
Descriptor: ALPHA-1-ANTITRYPSIN
Authors:Huntington, J.A, Pannu, N.S, Hazes, B, Read, R.J, Lomas, D.A, Carrell, R.W.
Deposit date:1999-09-24
Release date:2000-02-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A 2.6A Structure of a Serpin Polymer and Implications for Conformational Disease
J.Mol.Biol., 293, 1999
1OBF
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The crystal structure of Glyceraldehyde 3-phosphate Dehydrogenase from Alcaligenes xylosoxidans at 1.7A resolution.
Descriptor: GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE, POTASSIUM ION, SULFATE ION, ...
Authors:Antonyuk, S.V, Eady, R.R, Strange, R.W, Hasnain, S.S.
Deposit date:2003-01-30
Release date:2003-06-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Alcaligenes Xylosoxidans at 1.7 A Resolution
Acta Crystallogr.,Sect.D, 59, 2003
4A7Q
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Structure of human I113T SOD1 mutant complexed with 4-(4-methyl-1,4- diazepan-1-yl)quinazoline in the p21 space group.
Descriptor: 4-(4-METHYL-1,4-DIAZEPAN-1-YL)QUINAZOLINE, COPPER (II) ION, SULFATE ION, ...
Authors:Wright, G.S.A, Kershaw, N.M, Antonyuk, S.V, Strange, R.W, ONeil, P.M, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-10-24
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:X-Ray Crystallography and Computational Docking for the Detection and Development of Protein-Ligand Interactions.
Curr.Med.Chem., 20, 2013
4A7G
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Structure of human I113T SOD1 mutant complexed with 4-methylpiperazin- 1-yl)quinazoline in the p21 space group.
Descriptor: 4-(4-METHYLPIPERAZIN-1-YL)QUINAZOLINE, ACETATE ION, COPPER (II) ION, ...
Authors:Wright, G.S.A, Kershaw, N.M, Sharma, R, Antonyuk, S.V, Strange, R.W, Berry, N.G, O'Neil, P.M, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-10-24
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:X-ray crystallography and computational docking for the detection and development of protein-ligand interactions.
Curr.Med.Chem., 20, 2013
1R1L
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BU of 1r1l by Molmil
Structure of dimeric antithrombin complexed with a P14-P9 reactive loop peptide and an exogenous tripeptide (formyl-norleucine-LF)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antithrombin P14-P9 peptide, Antithrombin-III, ...
Authors:Zhou, A, Huntington, J.A, Lomas, D.A, Stein, P.E, Carrell, R.W.
Deposit date:2003-09-24
Release date:2004-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Serpins and the design of peptides to block intermolecular beta-linkages
To be Published
4AVG
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BU of 4avg by Molmil
Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 2
Descriptor: (Z)-4-[4-[(4-chlorophenyl)methyl]-1-(cyclohexylmethyl)piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-05-25
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
1R4G
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BU of 1r4g by Molmil
Solution structure of the Sendai virus protein X C-subdomain
Descriptor: RNA polymerase alpha subunit
Authors:Blanchard, L, Tarbouriech, N, Blackledge, M, Timmins, P, Burmeister, W.P, Ruigrok, R.W, Marion, D.
Deposit date:2003-10-06
Release date:2004-03-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of the nucleocapsid-binding domain of the Sendai virus phosphoprotein in solution
Virology, 319, 2004
4AWG
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Influenza strain pH1N1 2009 polymerase subunit PA endonuclease in complex with diketo compound 3
Descriptor: (2Z)-4-[(3S)-1-benzyl-3-(4-chlorobenzyl)piperidin-3-yl]-2-hydroxy-4-oxobut-2-enoic acid, MANGANESE (II) ION, POLYMERASE PA, ...
Authors:Kowalinski, E, Zubieta, C, Wolkerstorfer, A, Szolar, O.H, Ruigrok, R.W, Cusack, S.
Deposit date:2012-06-03
Release date:2012-08-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis of Specific Metal Chelating Inhibitor Binding to the Endonuclease Domain of Influenza Ph1N1 (2009) Polymerase.
Plos Pathog., 8, 2012
4CHC
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BU of 4chc by Molmil
Crystal structure of the N-terminal domain of the PA subunit of Thogoto virus polymerase (form 2)
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
1QIC
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BU of 1qic by Molmil
CRYSTAL STRUCTURE OF STROMELYSIN CATALYTIC DOMAIN
Descriptor: CALCIUM ION, PROTEIN (STROMELYSIN-1), ZINC ION
Authors:Williams, M.G, Ye, Q.-Z, Molina, F, Johnson, L.L, Ortwine, D.F, Pavlovsky, A.G, Rubin, J.R, Skeean, R.W, White, A.D, Blundell, T.L, Humblet, C, Hupe, D.J, Dhanaraj, V.
Deposit date:1999-06-11
Release date:2003-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structure of human stromelysin catalytic domain complexed with nonpeptide inhibitors: implications for inhibitor selectivity
Protein Sci., 8, 1999
4A7V
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BU of 4a7v by Molmil
Structure of human I113T SOD1 mutant complexed with dopamine in the p21 space group
Descriptor: COPPER (II) ION, L-DOPAMINE, SULFATE ION, ...
Authors:Wright, G.S.A, Antonyuk, S.V, Kershaw, N.M, Strange, R.W, Hasnain, S.S.
Deposit date:2011-11-14
Release date:2012-11-28
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (1 Å)
Cite:Ligand Binding and Aggregation of Pathogenic Sod1.
Nat.Commun., 4, 2013
4AU1
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BU of 4au1 by Molmil
Crystal Structure of CobH (precorrin-8x methyl mutase) complexed with C5 desmethyl-HBA
Descriptor: DESMETHYL-HBA, PRECORRIN-8X METHYLMUTASE, SULFATE ION
Authors:Deery, E, Lawrence, A.D, Schroeder, S, Taylor, S.L, Seyedarabi, A, Vevodova, J, Wilson, K.S, Brown, D, Geeves, M.A, Howard, M.J, Pickersgill, R.W, Warren, M.J.
Deposit date:2012-05-11
Release date:2012-09-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An Enzyme-Trap Approach Allows Isolation of Intermediates in Cobalamin Biosynthesis
Nat.Chem.Biol., 8, 2012
4D4N
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BU of 4d4n by Molmil
Nitrosyl complex of the D121A variant of cytochrome c prime from Alcaligenes xylosoxidans
Descriptor: CYTOCHROME C', HEME C, NITRIC OXIDE
Authors:Gahfoor, D.D, Kekilli, D, Abdullah, G.H, Dworkowski, F.S.N, Hassan, H.G, Wilson, M.T, Hough, M.A, Strange, R.W.
Deposit date:2014-10-30
Release date:2015-09-09
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Hydrogen Bonding of the Dissociated Histidine Ligand is not Required for Formation of a Proximal No Adduct in Cytochrome C'.
J.Biol.Inorg.Chem., 20, 2015
1PPN
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BU of 1ppn by Molmil
STRUCTURE OF MONOCLINIC PAPAIN AT 1.60 ANGSTROMS RESOLUTION
Descriptor: METHANOL, PAPAIN, UNKNOWN LIGAND
Authors:Pickersgill, R.W, Harris, G.W, Garman, E.
Deposit date:1991-10-25
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Monoclinic Papain at 1.60 Angstroms Resolution
Acta Crystallogr.,Sect.B, 48, 1992
1PMR
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BU of 1pmr by Molmil
LIPOYL DOMAIN FROM THE DIHYDROLIPOYL SUCCINYLTRANSFERASE COMPONENT OF THE 2-OXOGLUTARATE DEHYDROGENASE MULTIENZYME COMPLEX OF ESCHERICHIA COLI, NMR, 25 STRUCTURES
Descriptor: DIHYDROLIPOYL SUCCINYLTRANSFERASE
Authors:Ricaud, P.M, Howard, M.J, Roberts, E.L, Broadhurst, R.W, Perham, R.N.
Deposit date:1997-07-24
Release date:1998-07-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional structure of the lipoyl domain from the dihydrolipoyl succinyltransferase component of the 2-oxoglutarate dehydrogenase multienzyme complex of Escherichia coli.
J.Mol.Biol., 264, 1996
4CHD
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BU of 4chd by Molmil
Crystal structure of the '627' domain of the PB2 subunit of Thogoto virus polymerase
Descriptor: POLYMERASE ACIDIC PROTEIN
Authors:Guilligay, D, Kadlec, J, Crepin, T, Lunardi, T, Bouvier, D, Kochs, G, Ruigrok, R.W.H, Cusack, S.
Deposit date:2013-12-01
Release date:2014-02-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Comparative Structural and Functional Analysis of Orthomyxovirus Polymerase CAP-Snatching Domains.
Plos One, 9, 2014
1RL9
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BU of 1rl9 by Molmil
Crystal structure of Creatine-ADP arginine kinase ternary complex
Descriptor: (DIAMINOMETHYL-METHYL-AMINO)-ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, Arginine kinase, ...
Authors:Azzi, A, Clark, S.A, Ellington, R.W, Chapman, M.S.
Deposit date:2003-11-25
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The role of phosphagen specificity loops in arginine kinase.
Protein Sci., 13, 2004
4CO6
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BU of 4co6 by Molmil
Crystal structure of the Nipah virus RNA free nucleoprotein- phosphoprotein complex
Descriptor: BROMIDE ION, CHLORIDE ION, NUCLEOPROTEIN, ...
Authors:Yabukarksi, F, Lawrence, P, Tarbouriech, N, Bourhis, J.M, Jensen, M.R, Ruigrok, R.W.H, Blackledge, M, Volchkov, V, Jamin, M.
Deposit date:2014-01-27
Release date:2014-08-13
Last modified:2014-09-17
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Structure of Nipah Virus Unassembled Nucleoprotein in Complex with its Viral Chaperone.
Nat.Struct.Mol.Biol., 21, 2014
1RU4
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BU of 1ru4 by Molmil
Crystal structure of pectate lyase Pel9A
Descriptor: CALCIUM ION, Pectate lyase
Authors:Jenkins, J, Shevchik, V.E, Hugouvieux-Cotte-Pattat, N, Pickersgill, R.W.
Deposit date:2003-12-11
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of pectate lyase Pel9A from Erwinia chrysanthemi
J.Biol.Chem., 279, 2004

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