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PDB: 924 results

2LN7
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BU of 2ln7 by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for the catalytic domain of B. anthracis SrtD
Descriptor: LPXTG-site transpeptidase family protein
Authors:Robson, S.A, Weiner, E.M, Clubb, R.T.
Deposit date:2011-12-19
Release date:2012-11-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the Sortase Required for Efficient Production of Infectious Bacillus anthracis Spores.
Biochemistry, 51, 2012
1D4N
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BU of 1d4n by Molmil
HUMAN SERUM TRANSFERRIN
Descriptor: CARBONATE ION, FE (III) ION, TRANSFERRIN
Authors:Yang, H.-W, MacGillivray, R.T.A, Chen, J, Luo, Y, Wang, Y, Brayer, G.D, Mason, A, Woodworth, R.C, Murphy, M.E.P.
Deposit date:1999-10-04
Release date:2000-03-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of two mutants (K206Q, H207E) of the N-lobe of human transferrin with increased affinity for iron.
Protein Sci., 9, 2000
2I2J
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BU of 2i2j by Molmil
NMR structure of UA159sp in TFE
Descriptor: Competence stimulating peptide
Authors:Syvitski, R.T, Jakeman, D.L, Li, Y.
Deposit date:2006-08-16
Release date:2006-10-17
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structure-Activity Analysis of Quorum-Sensing Signaling Peptides from Streptococcus mutans.
J.Bacteriol., 189, 2007
2HYE
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BU of 2hye by Molmil
Crystal Structure of the DDB1-Cul4A-Rbx1-SV5V Complex
Descriptor: Cullin-4A, DNA damage-binding protein 1, Nonstructural protein V, ...
Authors:Angers, S, Li, T, Yi, X, MacCoss, M.J, Moon, R.T, Zheng, N.
Deposit date:2006-08-05
Release date:2006-10-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular architecture and assembly of the DDB1-CUL4A ubiquitin ligase machinery.
Nature, 443, 2006
2L9X
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BU of 2l9x by Molmil
Trn- peptide of the two-component bacteriocin Thuricin CD
Descriptor: Uncharacterized protein
Authors:Sit, C.S, Mckay, R.T, Hill, C, Ross, R.P, Vederas, J.C.
Deposit date:2011-02-25
Release date:2012-01-11
Last modified:2018-08-22
Method:SOLUTION NMR
Cite:The 3D structure of thuricin CD, a two-component bacteriocin with cysteine sulfur to alpha-carbon cross-links.
J.Am.Chem.Soc., 133, 2011
2HDD
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BU of 2hdd by Molmil
ENGRAILED HOMEODOMAIN Q50K VARIANT DNA COMPLEX
Descriptor: DNA (5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*G P*CP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*C P*CP*GP*GP*A)-3'), PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
Authors:Tucker-Kellogg, L, Rould, M.A, Chambers, K.A, Ades, S.E, Sauer, R.T, Pabo, C.O.
Deposit date:1998-02-10
Release date:1998-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engrailed (Gln50-->Lys) homeodomain-DNA complex at 1.9 A resolution: structural basis for enhanced affinity and altered specificity.
Structure, 5, 1997
2GPP
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BU of 2gpp by Molmil
Estrogen Related Receptor-gamma ligand binding domain complexed with a RIP140 peptide and synthetic ligand GSK4716
Descriptor: 4-HYDROXY-N'-(4-ISOPROPYLBENZYL)BENZOHYDRAZIDE, Estrogen-related receptor gamma, Nuclear receptor-interacting protein 1
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-18
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
2GMK
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BU of 2gmk by Molmil
Crystal structure of onconase double mutant with spontaneously-assembled (AMP) 4 stack
Descriptor: ADENOSINE MONOPHOSPHATE, P-30 protein
Authors:Bae, E, Lee, J.E, Raines, R.T, Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-04-06
Release date:2006-04-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for catalysis by onconase.
J.Mol.Biol., 375, 2008
2GPV
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BU of 2gpv by Molmil
Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen and a SMRT peptide
Descriptor: 4-HYDROXYTAMOXIFEN, Estrogen-related receptor gamma, Nuclear receptor corepressor 2
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-18
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
2M8W
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BU of 2m8w by Molmil
Restrained CS-Rosetta Solution NMR Structure of Staphylococcus aureus protein SAV1430. Northeast Structural Genomics Target ZR18. Structure determination
Descriptor: Uncharacterized protein
Authors:Mao, B, Tejero, R.T, Aramini, J.M, Snyder, D.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-05-29
Release date:2013-08-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:PDBStat: a universal restraint converter and restraint analysis software package for protein NMR.
J.Biomol.Nmr, 56, 2013
2M8X
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BU of 2m8x by Molmil
Restrained CS-Rosetta Solution NMR structure of the CARDB domain of PF1109 from Pyrococcus furiosus. Northeast Structural Genomics Consortium target PfR193A
Descriptor: Uncharacterized protein
Authors:Mao, B, Tejero, R.T, Aramini, J.M, Snyder, D.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-05-29
Release date:2013-08-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:PDBStat: a universal restraint converter and restraint analysis software package for protein NMR.
J.Biomol.Nmr, 56, 2013
2JMF
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BU of 2jmf by Molmil
Solution structure of the Su(dx) WW4- Notch PY peptide complex
Descriptor: E3 ubiquitin-protein ligase suppressor of deltex, Neurogenic locus Notch protein
Authors:Avis, J.M, Blankley, R.T, Jennings, M.D, Golovanov, A.P.
Deposit date:2006-11-05
Release date:2007-08-28
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Specificity and Autoregulation of Notch Binding by Tandem WW Domains in Suppressor of Deltex
J.Biol.Chem., 282, 2007
2POB
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BU of 2pob by Molmil
PPARgamma Ligand binding domain complexed with a farglitazar analogue gw4709
Descriptor: GLYCEROL, N-[(2S)-2-[(2-BENZOYLPHENYL)AMINO]-3-{4-[2-(5-METHYL-2-PHENYL-1,3-OXAZOL-4-YL)ETHOXY]PHENYL}PROPYL]ACETAMIDE, Peroxisome proliferator-activated receptor gamma
Authors:Nolte, R.T.
Deposit date:2007-04-26
Release date:2008-03-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cocrystal structure guided array synthesis of PPARgamma inverse agonists
BIOORG.MED.CHEM.LETT., 17, 2007
2PRG
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BU of 2prg by Molmil
LIGAND-BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA
Descriptor: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL), NUCLEAR RECEPTOR COACTIVATOR SRC-1, ...
Authors:Nolte, R.T, Wisely, G.B, Milburn, M.V.
Deposit date:1998-08-14
Release date:1999-07-19
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand binding and co-activator assembly of the peroxisome proliferator-activated receptor-gamma.
Nature, 395, 1998
2PXD
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BU of 2pxd by Molmil
Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle
Descriptor: 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein
Authors:Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S.
Deposit date:2007-05-14
Release date:2007-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
2PXP
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BU of 2pxp by Molmil
Variant 13 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle
Descriptor: 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein
Authors:Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S.
Deposit date:2007-05-14
Release date:2007-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
2KW8
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BU of 2kw8 by Molmil
Solution Structure of Bacillus anthracis Sortase A (SrtA) Transpeptidase
Descriptor: LPXTG-site transpeptidase family protein
Authors:Weiner, E.M, Robson, S.A, Marohn, M, Clubb, R.T.
Deposit date:2010-03-31
Release date:2010-05-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Sortase A enzyme that attaches proteins to the cell wall of Bacillus anthracis contains an unusual active site architecture.
J.Biol.Chem., 285, 2010
2PXB
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BU of 2pxb by Molmil
Variant 2 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle
Descriptor: 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein
Authors:Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S.
Deposit date:2007-05-14
Release date:2007-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
2PXL
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BU of 2pxl by Molmil
Variant 9 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle
Descriptor: 4.5 S RNA, COBALT HEXAMMINE(III), Signal recognition particle protein
Authors:Keel, A.Y, Rambo, R.P, Batey, R.T, Kieft, J.S.
Deposit date:2007-05-14
Release date:2007-08-07
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A General Strategy to Solve the Phase Problem in RNA Crystallography.
Structure, 15, 2007
3GDU
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BU of 3gdu by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YRF peptide
Descriptor: DegS protease, YRF peptide
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2009-02-24
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3GCN
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BU of 3gcn by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF)
Descriptor: Protease degS, YQF peptide
Authors:Sohn, J, Sauer, R.T, Grant, R.A.
Deposit date:2009-02-22
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Mechanisms of allosteric activation of the DegS protease by OMP-peptide binding and protein-substrate binding
To be Published
3G1B
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BU of 3g1b by Molmil
The structure of the M53A mutant of Caulobacter crescentus clpS protease adaptor protein in complex with WLFVQRDSKE peptide
Descriptor: 10-residue peptide, ATP-dependent Clp protease adapter protein clpS, MAGNESIUM ION
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-01-29
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.448 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
3GDV
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BU of 3gdv by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide
Descriptor: DegS protease, YQF peptide
Authors:Sohn, J, Grant, R.A, Sauer, R.T.
Deposit date:2009-02-24
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism.
Structure, 17, 2009
3GES
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BU of 3ges by Molmil
Crystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanine
Descriptor: 6-O-methylguanine, ACETATE ION, COBALT HEXAMMINE(III), ...
Authors:Gilbert, S.D, Batey, R.T.
Deposit date:2009-02-26
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs
Structure, 17, 2009
3GX5
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BU of 3gx5 by Molmil
Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAM
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (94-MER), ...
Authors:Montange, R.K, Batey, R.T.
Deposit date:2009-04-01
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010

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