2POB

PPARgamma Ligand binding domain complexed with a farglitazar analogue gw4709

Summary for 2POB

DescriptorPeroxisome proliferator-activated receptor gamma, N-[(2S)-2-[(2-BENZOYLPHENYL)AMINO]-3-{4-[2-(5-METHYL-2-PHENYL-1,3-OXAZOL-4-YL)ETHOXY]PHENYL}PROPYL]ACETAMIDE, GLYCEROL, ... (4 entities in total)
Functional Keywordspparg, nuclear receptor, ppar, gene regulation
Biological sourceHomo sapiens (human)
Cellular locationNucleus P37231
Total number of polymer chains2
Total molecular weight62854.04
Authors
Nolte, R.T. (deposition date: 2007-04-26, release date: 2008-03-18, Last modification date: 2017-10-18)
Primary citation
Trump, R.P.,Cobb, J.E.,Shearer, B.G.,Lambert, M.H.,Nolte, R.T.,Willson, T.M.,Buckholtz, R.G.,Zhao, S.M.,Leesnitzer, L.M.,Iannone, M.A.,Pearce, K.H.,Billin, A.N.,Hoekstra, W.J.
Cocrystal structure guided array synthesis of PPARgamma inverse agonists
BIOORG.MED.CHEM.LETT., 17:3916-3920, 2007
PubMed: 17533125 (PDB entries with the same primary citation)
DOI: 10.1016/j.bmcl.2007.04.111
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.3 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliers0.32380.4%5.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report