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PDB: 910 results

4I63
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BU of 4i63 by Molmil
Crystal Structure of E-R ClpX Hexamer
Descriptor: ATP-dependent Clp protease ATP-binding subunit ClpX, SULFATE ION
Authors:Glynn, S.E, Nager, A.R, Stinson, B.S, Schmitz, K.R, Baker, T.A, Sauer, R.T.
Deposit date:2012-11-29
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.709 Å)
Cite:Nucleotide Binding and Conformational Switching in the Hexameric Ring of a AAA+ Machine.
Cell(Cambridge,Mass.), 153, 2013
5V8C
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BU of 5v8c by Molmil
LytR-Csp2A-Psr enzyme from Actinomyces oris
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Amer, B.R, Sawaya, M.R, Liauw, B, Fu, J.Y, Ton-That, H, Clubb, R.T.
Deposit date:2017-03-21
Release date:2018-04-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure and Mechanism of LcpA, a Phosphotransferase That Mediates Glycosylation of a Gram-Positive Bacterial Cell Wall-Anchored Protein.
MBio, 10, 2019
3L0E
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BU of 3l0e by Molmil
X-ray crystal structure of a Potent Liver X Receptor Modulator
Descriptor: N-(2-chloro-6-fluorobenzyl)-1-methyl-N-{[3'-(methylsulfonyl)biphenyl-4-yl]methyl}-1H-imidazole-4-sulfonamide, Nuclear receptor coactivator 2, Oxysterols receptor LXR-beta
Authors:Gampe Jr, R.T.
Deposit date:2009-12-09
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of tertiary sulfonamides as potent liver X receptor antagonists.
J.Med.Chem., 53, 2010
6LAA
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BU of 6laa by Molmil
Crystal structure of full-length CYP116B46 from Tepidiphilus thermophilus
Descriptor: 1,2-ETHANEDIOL, CARBONATE ION, Cytochrome P450, ...
Authors:Zhang, L.L, Ko, T.P, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-11-12
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural insight into the electron transfer pathway of a self-sufficient P450 monooxygenase.
Nat Commun, 11, 2020
5IE7
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BU of 5ie7 by Molmil
Crystal structure of a lactonase double mutant in complex with substrate b
Descriptor: (3S,7S,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one, Zearalenone hydrolase
Authors:Zheng, Y.Y, Xu, Z.X, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2016-02-25
Release date:2017-01-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Enhanced alph-Zearalenol Hydrolyzing Activity of a Mycoestrogen-Detoxifying Lactonase by Structure-Based Engineering
Acs Catalysis, 6, 2016
6KQX
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BU of 6kqx by Molmil
Crystal structure of Yijc from B. subtilis in complex with UDP
Descriptor: URIDINE-5'-DIPHOSPHATE, Uncharacterized UDP-glucosyltransferase YjiC
Authors:Hu, Y.M, Dai, L.H, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-08-20
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural dissection of unnatural ginsenoside-biosynthetic UDP-glycosyltransferase Bs-YjiC from Bacillus subtilis for substrate promiscuity.
Biochem.Biophys.Res.Commun., 534, 2021
5I77
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BU of 5i77 by Molmil
Crystal structure of a beta-1,4-endoglucanase from Aspergillus niger
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Li, Y.J, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2016-02-17
Release date:2016-12-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Functional and structural analysis of Pichia pastoris-expressed Aspergillus niger 1,4-beta-endoglucanase
Biochem. Biophys. Res. Commun., 475, 2016
5IE6
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BU of 5ie6 by Molmil
Crystal structure of a lactonase mutant in complex with substrate b
Descriptor: (3S,7S,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one, Zearalenone hydrolase
Authors:Zheng, Y.Y, Xu, Z.X, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2016-02-25
Release date:2017-01-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Enhanced alph-Zearalenol Hydrolyzing Activity of a Mycoestrogen-Detoxifying Lactonase by Structure-Based Engineering
Acs Catalysis, 6, 2016
5IE5
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BU of 5ie5 by Molmil
Crystal structure of a lactonase double mutant in complex with substrate a
Descriptor: (3S,7R,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one, Zearalenone hydrolase
Authors:Zheng, Y.Y, Xu, Z.X, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2016-02-25
Release date:2017-01-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Enhanced alph-Zearalenol Hydrolyzing Activity of a Mycoestrogen-Detoxifying Lactonase by Structure-Based Engineering
Acs Catalysis, 6, 2016
6J8V
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BU of 6j8v by Molmil
Structure of MOEN5-SSO7D fusion protein in complex with ligand 2
Descriptor: FARNESYL, MoeN5,DNA-binding protein 7d
Authors:Ko, T.P, Zhang, L.L, Chen, C.C, Guo, R.T.
Deposit date:2019-01-21
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
5HC7
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BU of 5hc7 by Molmil
Crystal structure of lavandulyl diphosphate synthase from Lavandula x intermedia in complex with S-thiolo-isopentenyldiphosphate
Descriptor: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, prenyltransference for protein
Authors:Liu, M.X, Liu, W.D, Gao, J, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2016-01-04
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure and Function of a "Head-to-Middle" Prenyltransferase: Lavandulyl Diphosphate Synthase
Angew.Chem.Int.Ed.Engl., 55, 2016
3O1F
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BU of 3o1f by Molmil
P1 crystal form of E. coli ClpS at 1.4 A resolution
Descriptor: ATP-dependent Clp protease adapter protein clpS
Authors:Roman-Hernandez, G, Hou, J.Y, Grant, R.A, Sauer, R.T, Baker, T.A.
Deposit date:2010-07-21
Release date:2011-07-27
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The ClpS Adaptor Mediates Staged Delivery of N-End Rule Substrates to the AAA+ ClpAP Protease.
Mol.Cell, 43, 2011
4FRG
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BU of 4frg by Molmil
Crystal structure of the cobalamin riboswitch aptamer domain
Descriptor: Hydroxocobalamin, IRIDIUM (III) ION, MAGNESIUM ION, ...
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-06-26
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
3MMP
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BU of 3mmp by Molmil
Structure of the Qb replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins
Descriptor: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, Elongation factor Tu 2, Elongation factor Ts, ...
Authors:Kidmose, R.T, Vasiliev, N.N, Chetverin, A.B, Knudsen, C.R, Andersen, G.R.
Deposit date:2010-04-20
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Qbeta replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins.
Proc.Natl.Acad.Sci.USA, 107, 2010
5HC8
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BU of 5hc8 by Molmil
Crystal structure of lavandulyl diphosphate synthase from Lavandula x intermedia in complex with dimethylallyl diphosphate
Descriptor: 2-methylbuta-1,3-diene, 3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acid, MAGNESIUM ION, ...
Authors:Liu, M.X, Liu, W.D, Gao, J, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2016-01-04
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure and Function of a "Head-to-Middle" Prenyltransferase: Lavandulyl Diphosphate Synthase
Angew.Chem.Int.Ed.Engl., 55, 2016
6J03
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BU of 6j03 by Molmil
Crystal structure of a cyclase mutant in apo form
Descriptor: 12-epi-hapalindole U synthase, CALCIUM ION, amino({3-[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]propyl}amino)methaniminium
Authors:Tang, X.K, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2018-12-20
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural insights into the calcium dependence of Stig cyclases.
Rsc Adv, 9, 2019
5H9D
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BU of 5h9d by Molmil
Crystal structure of Heptaprenyl Diphosphate Synthase from Staphylococcus aureus
Descriptor: C-terminal peptide from Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein, Farnesyl pyrophosphate synthetase, Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein, ...
Authors:Wei, H.L, Liu, W.D, Zheng, Y.Y, Ko, T.P, Chen, C.C, Guo, R.T.
Deposit date:2015-12-28
Release date:2016-12-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure, Function, and Inhibition of Staphylococcus aureus Heptaprenyl Diphosphate Synthase
ChemMedChem, 11, 2016
5XFY
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BU of 5xfy by Molmil
Crystal structure of a novel PET hydrolase S131A mutant from Ideonella sakaiensis 201-F6
Descriptor: GLYCEROL, Poly(ethylene terephthalate) hydrolase, SULFATE ION
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2017-04-11
Release date:2017-12-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insight into catalytic mechanism of PET hydrolase
Nat Commun, 8, 2017
5XG0
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BU of 5xg0 by Molmil
Crystal structure of a novel PET hydrolase from Ideonella sakaiensis 201-F6
Descriptor: Poly(ethylene terephthalate) hydrolase
Authors:Han, X, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2017-04-11
Release date:2017-12-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural insight into catalytic mechanism of PET hydrolase
Nat Commun, 8, 2017
5V1Z
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BU of 5v1z by Molmil
Crystal structure of the RPN13 PRU-RPN2 (932-953)-ubiquitin complex
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Hemmis, C.W, VanderLinden, R.T, Yao, T, Robinson, H, Hill, C.P.
Deposit date:2017-03-02
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and energetics of pairwise interactions between proteasome subunits RPN2, RPN13, and ubiquitin clarify a substrate recruitment mechanism.
J. Biol. Chem., 292, 2017
5V1Y
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BU of 5v1y by Molmil
Crystal structure of the ternary RPN13 PRU-RPN2 (940-953)-ubiquitin complex
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Hemmis, C.W, VanderLinden, R.T, Yao, T, Robinson, H, Hill, C.P.
Deposit date:2017-03-02
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.421 Å)
Cite:Structure and energetics of pairwise interactions between proteasome subunits RPN2, RPN13, and ubiquitin clarify a substrate recruitment mechanism.
J. Biol. Chem., 292, 2017
5IE4
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BU of 5ie4 by Molmil
Crystal structure of a lactonase mutant in complex with substrate a
Descriptor: (3S,7R,11E)-7,14,16-trihydroxy-3-methyl-3,4,5,6,7,8,9,10-octahydro-1H-2-benzoxacyclotetradecin-1-one, Zearalenone hydrolase
Authors:Zheng, Y.Y, Xu, Z.X, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2016-02-25
Release date:2017-01-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Enhanced alph-Zearalenol Hydrolyzing Activity of a Mycoestrogen-Detoxifying Lactonase by Structure-Based Engineering
Acs Catalysis, 6, 2016
3NPQ
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BU of 3npq by Molmil
Structure of the S-adenosylhomocysteine riboswitch at 2.18 A
Descriptor: COBALT HEXAMMINE(III), S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH
Authors:Reyes, F.E, Edwards, A.E, Batey, R.T.
Deposit date:2010-06-28
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1814 Å)
Cite:Structural basis for recognition of S-adenosylhomocysteine by riboswitches.
Rna, 16, 2010
6KQW
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BU of 6kqw by Molmil
Crystal structure of Yijc from B. subtilis
Descriptor: CITRIC ACID, Uncharacterized UDP-glucosyltransferase YjiC
Authors:Hu, Y.M, Dai, L.H, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-08-20
Release date:2020-09-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural dissection of unnatural ginsenoside-biosynthetic UDP-glycosyltransferase Bs-YjiC from Bacillus subtilis for substrate promiscuity.
Biochem.Biophys.Res.Commun., 534, 2021
4GMA
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BU of 4gma by Molmil
Crystal structure of the adenosylcobalamin riboswitch
Descriptor: Adenosylcobalamin, Adenosylcobalamin riboswitch
Authors:Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
Deposit date:2012-08-15
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012

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