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PDB: 2930 results

1A6G
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CARBONMONOXY-MYOGLOBIN, ATOMIC RESOLUTION
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Vojtechovsky, J, Chu, K, Berendzen, J, Sweet, R.M, Schlichting, I.
Deposit date:1998-02-25
Release date:1998-10-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structures of myoglobin-ligand complexes at near-atomic resolution.
Biophys.J., 77, 1999
4TZG
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Crystal structure of eCGP123, an extremely thermostable green fluorescent protein
Descriptor: Fluorescent Protein
Authors:Close, D.W, Don Paul, C, Traore, D.A.K, Wilce, M.C.J, Prescott, M, Bradbury, A.R.M.
Deposit date:2014-07-10
Release date:2014-10-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Thermal green protein, an extremely stable, nonaggregating fluorescent protein created by structure-guided surface engineering.
Proteins, 83, 2015
8P37
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Structure a catalytically inactive mutant of the IMP dehydrogenase related protein GUAB3 from Synechocystis PCC 6803
Descriptor: IMP dehydrogenase subunit, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, XANTHOSINE-5'-MONOPHOSPHATE
Authors:Hernandez-Gomez, A, Fernandez-Justel, D, Buey, R.M.
Deposit date:2023-05-17
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.219 Å)
Cite:GuaB3, an overlooked enzyme in cyanobacteria's toolbox that sheds light on IMP dehydrogenase evolution.
Structure, 31, 2023
8P4Q
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Structure of the IMP dehydrogenase related protein GUAB3 from Synechocystis PCC 6803
Descriptor: IMP dehydrogenase subunit, INOSINIC ACID, XANTHOSINE-5'-MONOPHOSPHATE
Authors:Hernandez-Gomez, A, Fernandez-Justel, D, Buey, R.M.
Deposit date:2023-05-23
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:GuaB3, an overlooked enzyme in cyanobacteria's toolbox that sheds light on IMP dehydrogenase evolution.
Structure, 31, 2023
4U0J
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Crystal structure of Mycobacterium tuberculosis enoyl reductase (INHA) complexed with 1-CYCLOHEXYL-5-OXO-N-PHENYLPYRROLIDINE-3-CARBOXAMIDE, refined with new ligand restraints
Descriptor: (3S)-1-CYCLOHEXYL-5-OXO-N-PHENYLPYRROLIDINE-3-CARBOXAMIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, X, Alian, A, Stroud, R.M, Ortiz de Montellano, P.R.
Deposit date:2014-07-11
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis
J. Med. Chem., 2006
4U0K
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Crystal structure of Mycobacterium tuberculosis enoyl reductase complexed with N-(5-chloro-2-methylphenyl)-1-cyclohexyl-5-oxopyrrolidine-3-carboxamide
Descriptor: (3S)-N-(5-CHLORO-2-METHYLPHENYL)-1-CYCLOHEXYL-5-OXOPYRROLIDINE-3-CARBOXAMIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, X, Alian, A, Stroud, R.M, Ortiz de Montellano, P.R.
Deposit date:2014-07-11
Release date:2014-07-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis
J. Med. Chem., 2006
5W7M
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Crystal structure of RoqN
Descriptor: Glandicoline B O-methyltransferase roqN, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
5ZB9
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Crystal structure of Rtt109 from Aspergillus fumigatus
Descriptor: DNA damage response protein Rtt109, putative, GLYCEROL
Authors:Zhang, L, Serra-Cardona, A, Zhou, H, Wang, M, Yang, N, Zhang, Z, Xu, R.M.
Deposit date:2018-02-10
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Multisite Substrate Recognition in Asf1-Dependent Acetylation of Histone H3 K56 by Rtt109.
Cell, 174, 2018
7MKJ
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Cryo-EM structure of Escherichia coli RNA polymerase bound to T7A1 promoter DNA
Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Saecker, R.M, Darst, S.A, Chen, J.
Deposit date:2021-04-23
Release date:2021-09-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural origins of Escherichia coli RNA polymerase open promoter complex stability.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MMM
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BU of 7mmm by Molmil
LyeTx I
Descriptor: Toxin LyeTx 1
Authors:Verly, R.M.
Deposit date:2021-04-29
Release date:2021-09-29
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:LyeTx I, a potent antimicrobial peptide from the venom of the spider Lycosa erythrognatha
Amino Acids, 39, 2010
7MKD
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Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR promoter DNA (class 1)
Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Saecker, R.M, Darst, S.A, Chen, J.
Deposit date:2021-04-23
Release date:2021-09-29
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural origins of Escherichia coli RNA polymerase open promoter complex stability.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MKE
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BU of 7mke by Molmil
Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR promoter DNA (class 2)
Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Saecker, R.M, Darst, S.A, Chen, J.
Deposit date:2021-04-23
Release date:2021-09-29
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural origins of Escherichia coli RNA polymerase open promoter complex stability.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MKI
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BU of 7mki by Molmil
Cryo-EM structure of Escherichia coli RNA polymerase bound to lambda PR (-5G to C) promoter DNA
Descriptor: CHAPSO, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Saecker, R.M, Darst, S.A, Chen, J.
Deposit date:2021-04-23
Release date:2021-09-29
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural origins of Escherichia coli RNA polymerase open promoter complex stability.
Proc.Natl.Acad.Sci.USA, 118, 2021
4RWM
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BU of 4rwm by Molmil
Kuenenia stuttgartiensis hydroxylamine oxidoreductase cryoprotected with ethylene glycol
Descriptor: 1,2-ETHANEDIOL, 1-[(4-cyclohexylbutanoyl)(2-hydroxyethyl)amino]-1-deoxy-D-glucitol, HEME C, ...
Authors:Dietl, A, Maalcke, W, Barends, T.R.M.
Deposit date:2014-12-05
Release date:2015-08-12
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An unexpected reactivity of the P460 cofactor in hydroxylamine oxidoreductase.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
7LWZ
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BU of 7lwz by Molmil
Apo Structure of Vibrio cholerae dGTPase protein VC1979
Descriptor: Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1, NICKEL (II) ION
Authors:Sikkema, A.P, Horng, J, Klemm, B.P, Schaaper, R.M, Hall, T.M.T.
Deposit date:2021-03-02
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structure of Vibrio cholerae dGTPase protein VC1979
To Be Published
1BJ8
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BU of 1bj8 by Molmil
THIRD N-TERMINAL DOMAIN OF GP130, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: GP130
Authors:Kernebeck, T, Pflanz, S, Muller-Newen, G, Kurapkat, G, Scheek, R.M, Dijkstra, K, Heinrich, P.C, Wollmer, A, Grzesiek, S, Grotzinger, J.
Deposit date:1998-07-02
Release date:1999-01-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The signal transducer gp130: solution structure of the carboxy-terminal domain of the cytokine receptor homology region.
Protein Sci., 8, 1999
4TZT
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BU of 4tzt by Molmil
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ENOYL REDUCTASE (INHA) COMPLEXED WITH N-(3-CHLORO-2-METHYLPHENYL)-1-CYCLOHEXYL- 5-OXOPYRROLIDINE-3-CARBOXAMIDE
Descriptor: (3S)-N-(3-CHLORO-2-METHYLPHENYL)-1-CYCLOHEXYL-5-OXOPYRROLIDINE-3-CARBOXAMIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, X, Alian, A, Stroud, R.M, Ortiz de Montellano, P.R.
Deposit date:2014-07-10
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis
J. Med. Chem., 2006
1BJP
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BU of 1bjp by Molmil
CRYSTAL STRUCTURE OF 4-OXALOCROTONATE TAUTOMERASE INACTIVATED BY 2-OXO-3-PENTYNOATE AT 2.4 ANGSTROMS RESOLUTION
Descriptor: 2-OXO-3-PENTENOIC ACID, 4-OXALOCROTONATE TAUTOMERASE
Authors:Taylor, A.B, Czerwinski, R.M, Johnson Junior, W.H, Whitman, C.P, Hackert, M.L.
Deposit date:1998-06-26
Release date:1998-12-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of 4-oxalocrotonate tautomerase inactivated by 2-oxo-3-pentynoate at 2.4 A resolution: analysis and implications for the mechanism of inactivation and catalysis.
Biochemistry, 37, 1998
4UC1
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BU of 4uc1 by Molmil
High resolution crystal structure of translocator protein 18kDa (TSPO) from Rhodobacter sphaeroides (A139T Mutant) in C2 space group
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)-3-hydroxypropan-2-yl (11Z)-octadec-11-enoate, METHOXY-ETHOXYL, ...
Authors:Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2014-08-13
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism.
Science, 347, 2015
4UC3
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Translocator protein 18 kDa (TSPO) from Rhodobacter sphaeroides wild type
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoate, TRANSLOCATOR PROTEIN TSPO
Authors:Li, F, Liu, J, Zheng, Y, Garavito, R.M, Ferguson-Miller, S.
Deposit date:2014-08-13
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of translocator protein (TSPO) and mutant mimic of a human polymorphism.
Science, 347, 2015
8POA
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BU of 8poa by Molmil
Structure of Coxsackievirus A16 (G-10) 2A protease
Descriptor: GLYCEROL, Protease 2A, ZINC ION
Authors:Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
Deposit date:2023-07-04
Release date:2023-08-02
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of EV A71 2A protease - to be published
To Be Published
4UE3
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BU of 4ue3 by Molmil
The Mechanism of Hydrogen Activation by NiFe-hydrogenases and the Importance of the active site Arginine
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Evans, R.M, Wehlin, S.A.M, Nomerotskaia, E, Sargent, F, Carr, S.B, Phillips, S.E.V, Armstrong, F.A.
Deposit date:2014-12-15
Release date:2014-12-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of Hydrogen Activation by [Nife] Hydrogenases.
Nat.Chem.Biol., 12, 2016
8PN6
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Crystal Structure of co-expressed NS2B-NS3 Protease from Zika Virus
Descriptor: Genome polyprotein, Serine protease subunit NS2B
Authors:Ni, X, Fairhead, M, Balcomb, B.H, Aschenbrenner, J.C, Ferreira, L.M, Godoy, A.S, Lithgo, R.M, MacLean, E.M, Marples, P.G, Thompson, W, Tomlinson, C.W.E, Szommer, T, Wild, C, Wright, N.D, Koekemoer, L, Fearon, D, Walsh, M.A, von Delft, F.
Deposit date:2023-06-29
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal Structure of co-expressed NS2B-NS3 Protease from Zika Virus
To Be Published
3C0E
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BU of 3c0e by Molmil
Yeast Hsp82 N-terminal domain: effects of mutants 98-99 KS-AA
Descriptor: ATP-dependent molecular chaperone HSP82
Authors:Immormino, R.M, Gewirth, D.T.
Deposit date:2008-01-19
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of GRP94 with the Specific Mutation KS168-169AA with Bound Geldanamycin
To be Published
5W7R
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BU of 5w7r by Molmil
Crystal structure of OxaC in complex with SAH and oxaline
Descriptor: (3E,7aR,12aS)-3-[(1H-imidazol-4-yl)methylidene]-6,12-dimethoxy-7a-(2-methylbut-3-en-2-yl)-7a,12-dihydro-1H,5H-imidazo[1 ',2':1,2]pyrido[2,3-b]indole-2,5(3H)-dione, OxaC, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
Deposit date:2017-06-20
Release date:2018-07-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018

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