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PDB: 2930 results

2W2N
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BU of 2w2n by Molmil
WT PCSK9-deltaC bound to EGF-A H306Y mutant of LDLR
Descriptor: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
Authors:Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
Deposit date:2008-11-03
Release date:2008-11-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
6GPZ
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BU of 6gpz by Molmil
Cell division regulator GpsB in complex with peptide fragment of L. monocytogenes Penicillin Binding Protein PBPA1
Descriptor: Cell cycle protein GpsB, IMIDAZOLE, LmPBPA1, ...
Authors:Cleverley, R.M, Lewis, R.J, Rutter, Z.J.
Deposit date:2018-06-07
Release date:2019-01-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The cell cycle regulator GpsB functions as cytosolic adaptor for multiple cell wall enzymes.
Nat Commun, 10, 2019
6GPN
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BU of 6gpn by Molmil
Crystal Structure of the CsiD Glutarate Hydroxylase in complex with N-Oxalylglycine
Descriptor: FE (II) ION, Glutarate 2-hydroxylase, N-OXALYLGLYCINE
Authors:Williams, R.M, Mayans, O, Hartig, J.S.
Deposit date:2018-06-06
Release date:2019-01-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Widespread bacterial lysine degradation proceeding via glutarate and L-2-hydroxyglutarate.
Nat Commun, 9, 2018
6GPE
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BU of 6gpe by Molmil
Crystal Structure of the CsiD Glutarate Hydroxylase
Descriptor: FE (II) ION, Protein CsiD
Authors:Williams, R.M, Mayans, O, Hartig, J.S.
Deposit date:2018-06-05
Release date:2018-12-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Widespread bacterial lysine degradation proceeding via glutarate and L-2-hydroxyglutarate.
Nat Commun, 9, 2018
5L2H
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BU of 5l2h by Molmil
Crystal Structure of W26A mutant of anti-EGFR Centyrin P54AR4-83v2
Descriptor: Centyrin, GLYCEROL
Authors:Cardoso, R.M.F, Goldberg, S.D, O Neil, K.T, Gilliland, G.L.
Deposit date:2016-08-01
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8013 Å)
Cite:Engineering a targeted delivery platform using Centyrins.
Protein Eng. Des. Sel., 29, 2016
5L25
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BU of 5l25 by Molmil
Crystal Structure of Arabidopsis thaliana Bor1
Descriptor: Boron transporter 1
Authors:Thurtle-Schmidt, B.H, Stroud, R.M.
Deposit date:2016-07-31
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.11 Å)
Cite:Structure of Bor1 supports an elevator transport mechanism for SLC4 anion exchangers.
Proc.Natl.Acad.Sci.USA, 113, 2016
8PN6
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BU of 8pn6 by Molmil
Crystal Structure of co-expressed NS2B-NS3 Protease from Zika Virus
Descriptor: Genome polyprotein, Serine protease subunit NS2B
Authors:Ni, X, Fairhead, M, Balcomb, B.H, Aschenbrenner, J.C, Ferreira, L.M, Godoy, A.S, Lithgo, R.M, MacLean, E.M, Marples, P.G, Thompson, W, Tomlinson, C.W.E, Szommer, T, Wild, C, Wright, N.D, Koekemoer, L, Fearon, D, Walsh, M.A, von Delft, F.
Deposit date:2023-06-29
Release date:2023-08-16
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal Structure of co-expressed NS2B-NS3 Protease from Zika Virus
To Be Published
2VD9
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BU of 2vd9 by Molmil
The crystal structure of alanine racemase from Bacillus anthracis (BA0252) with bound L-Ala-P
Descriptor: (1S)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]ETHYLPHOSPHONIC ACID, ALANINE RACEMASE, CHLORIDE ION, ...
Authors:Au, K, Ren, J, Walter, T.S, Harlos, K, Nettleship, J.E, Owens, R.J, Stuart, D.I, Esnouf, R.M, Oxford Protein Production Facility (OPPF), Structural Proteomics in Europe (SPINE)
Deposit date:2007-10-01
Release date:2008-05-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of an Alanine Racemase from Bacillus Anthracis (Ba0252) in the Presence and Absence of (R)-1-Aminoethylphosphonic Acid (L-Ala-P).
Acta Crystallogr.,Sect.F, 64, 2008
6HAT
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BU of 6hat by Molmil
Globular domain of herpesvirus saimiri ORF57
Descriptor: ACETATE ION, ZINC ION, mRNA export factor ICP27 homolog
Authors:Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P.
Deposit date:2018-08-08
Release date:2018-11-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition.
Nucleic Acids Res., 47, 2019
5XWE
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BU of 5xwe by Molmil
Structure of a three finger toxin from Ophiophagus hannah venom
Descriptor: CHLORIDE ION, GLYCEROL, Weak toxin DE-1 homolog 1, ...
Authors:Jobichen, C, Roy, A, Kini, R.M, Sivaraman, J.
Deposit date:2017-06-29
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a three finger toxin from Ophiophagus hannah venom
To Be Published
5LMM
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BU of 5lmm by Molmil
Structure of E coli Hydrogenase Hyd-1 mutant E28Q
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, ...
Authors:Carr, S.B, Phillips, S.E.V, Evans, R.M, Brooke, E.J, Armstrong, F.A.
Deposit date:2016-08-01
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Kinetic consequences of re-engineering the outer shell "canopy" above the active site of a [NiFe]-hydrogenase.
To Be Published
5YHP
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BU of 5yhp by Molmil
Proline iminopeptidase from Psychrophilic yeast glaciozyma antarctica
Descriptor: CITRATE ANION, Cold active proline iminopeptidase
Authors:Rodzli, N.A, Kamaruddin, S, Jonet, A, Seman, W.M.K.W, Tab, M.M, Minor, N, Jaafar, N.R, Mahadi, N.M, Murad, A.M.A, Bakar, F.D.A, Illias, R.M.D.
Deposit date:2017-09-29
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Proline iminopeptidase from Psychrophilic yeast glaciozyma antarctica
To Be Published
6HIF
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BU of 6hif by Molmil
Kuenenia stuttgartiensis hydrazine dehydrogenase complex
Descriptor: GLYCEROL, HEME C, Hydrazine dehydrogenase, ...
Authors:Akram, M, Dietl, A, Mersdorf, U, Prinz, S, Maalcke, W, Keltjens, J, Ferousi, C, de Almeida, N.M, Reimann, J, Kartal, B, Jetten, M.S.M, Parey, K, Barends, T.R.M.
Deposit date:2018-08-29
Release date:2019-04-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A 192-heme electron transfer network in the hydrazine dehydrogenase complex.
Sci Adv, 5, 2019
6HPF
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BU of 6hpf by Molmil
Structure of Inactive E165Q mutant of fungal non-CBM carrying GH26 endo-b-mannanase from Yunnania penicillata in complex with alpha-62-61-di-galactosyl-mannotriose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CHLORIDE ION, ...
Authors:von Freiesleben, P, Moroz, O.V, Blagova, E, Wiemann, M, Spodsberg, N, Agger, J.W, Davies, G.J, Wilson, K.S, Stalbrand, H, Meyer, A.S, Krogh, K.B.R.M.
Deposit date:2018-09-20
Release date:2019-03-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal structure and substrate interactions of an unusual fungal non-CBM carrying GH26 endo-beta-mannanase from Yunnania penicillata.
Sci Rep, 9, 2019
5LYP
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BU of 5lyp by Molmil
Crystal structure of the Tpr Domain of Sgt2.
Descriptor: BORATE ION, Small glutamine-rich tetratricopeptide repeat-containing protein 2
Authors:Krysztofinska, E.M, Morgan, R.M.L, Thapaliya, A, Evans, N.J, Murray, J.W, Martinez-Lumbreras, S, Isaacson, R.L.
Deposit date:2016-09-28
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure and Interactions of the TPR Domain of Sgt2 with Yeast Chaperones and Ybr137wp.
Front Mol Biosci, 4, 2017
5W7P
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BU of 5w7p by Molmil
Crystal structure of OxaC
Descriptor: OxaC, S-ADENOSYLMETHIONINE
Authors:Newmister, S.A, Romminger, S, Schmidt, J.J, Williams, R.M, Smith, J.L, Berlinck, R.G.S, Sherman, D.H.
Deposit date:2017-06-20
Release date:2018-06-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unveiling sequential late-stage methyltransferase reactions in the meleagrin/oxaline biosynthetic pathway.
Org. Biomol. Chem., 16, 2018
6I0O
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BU of 6i0o by Molmil
Structure of human IMP dehydrogenase, isoform 2, bound to GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase 2, SULFATE ION
Authors:Buey, R.M, Fernandez-Justel, D, Revuelta, J.L.
Deposit date:2018-10-26
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.623 Å)
Cite:A Nucleotide-Dependent Conformational Switch Controls the Polymerization of Human IMP Dehydrogenases to Modulate their Catalytic Activity.
J. Mol. Biol., 431, 2019
5WPU
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BU of 5wpu by Molmil
Crystal structure HpiC1 Y101S
Descriptor: 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION
Authors:Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
Deposit date:2017-08-07
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
5WPS
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BU of 5wps by Molmil
Crystal structure HpiC1 Y101F
Descriptor: 1,2-ETHANEDIOL, 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
Deposit date:2017-08-07
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.389 Å)
Cite:Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
6I0M
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BU of 6i0m by Molmil
Structure of human IMP dehydrogenase, isoform 2, bound to GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, Inosine-5'-monophosphate dehydrogenase 2, ...
Authors:Buey, R.M, Fernandez-Justel, D, Revuelta, J.L.
Deposit date:2018-10-26
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.567 Å)
Cite:A Nucleotide-Dependent Conformational Switch Controls the Polymerization of Human IMP Dehydrogenases to Modulate their Catalytic Activity.
J. Mol. Biol., 431, 2019
2XCN
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BU of 2xcn by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: MAGNESIUM ION, N-[(CYCLOPENTYLOXY)CARBONYL]-3-METHYL-L-VALYL-(4R)-N-{(1R)-3-HYDROXY-1-[HYDROXY(OXIDO)BORANYL]PROPYL}-4-(ISOQUINOLIN-1-YLOXY)-L-PROLINAMIDE, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-23
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
2XCF
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BU of 2xcf by Molmil
Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE, MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-22
Release date:2010-06-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
6I3V
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BU of 6i3v by Molmil
x-ray structure of the human mitochondrial PRELID1 in complex with TRIAP1
Descriptor: CHLORIDE ION, MYRISTIC ACID, PRELI domain-containing protein 1, ...
Authors:Berry, J.L, Miliara, X, Morgan, R.M.L, Matthews, S.J.
Deposit date:2018-11-07
Release date:2019-03-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural determinants of lipid specificity within Ups/PRELI lipid transfer proteins.
Nat Commun, 10, 2019
6I7S
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BU of 6i7s by Molmil
Microsomal triglyceride transfer protein
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
Authors:Biterova, E, Isupov, M.N, Keegan, R.M, Lebedev, A.A, Ruddock, L.W.
Deposit date:2018-11-17
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of human microsomal triglyceride transfer protein.
Proc.Natl.Acad.Sci.USA, 116, 2019
2W8X
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BU of 2w8x by Molmil
Structure of the tick ion-channel modulator Ra-KLP
Descriptor: ACETATE ION, GLYCEROL, IMIDAZOLE, ...
Authors:Paesen, G.C, Siebold, C, Dallas, M, Peers, C, Harlos, K, Nuttall, P.A, Nunn, M.A, Stuart, D.I, Esnouf, R.M.
Deposit date:2009-01-20
Release date:2009-05-05
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Ion-Channel Modulator from the Saliva of the Brown Ear Tick Has a Highly Modified Kunitz/Bpti Structure.
J.Mol.Biol., 389, 2009

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