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PDB: 2930 件

4YZ7
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Crystal structure of Piratoxin I (PrTX-I) complexed to aristolochic acid
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 9-HYDROXY ARISTOLOCHIC ACID, Basic phospholipase A2 homolog piratoxin-1, ...
著者Fernandes, C.A.H, Fontes, M.R.M.
登録日2015-03-24
公開日2015-08-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9589 Å)
主引用文献Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids.
Plos One, 10, 2015
4YV5
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BU of 4yv5 by Molmil
Crystal Structure of Myotoxin II from Bothrops moojeni complexed to Suramin
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Basic phospholipase A2 homolog 2, ...
著者Salvador, G.H.M, Fontes, M.R.M.
登録日2015-03-19
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and functional evidence for membrane docking and disruption sites on phospholipase A2-like proteins revealed by complexation with the inhibitor suramin.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4WV8
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Crystal structure of a recombinant Vatairea macrocarpa seed lectin complexed with lactose
分子名称: CALCIUM ION, MANGANESE (II) ION, Seed lectin, ...
著者Sousa, B.L, Silva-Filho, J.C, Kumar, P, Lyskowski, A, Bezerra, G.A, Delatorre, P, Rocha, B.A.M, Cunha, R.M.S, Nagano, C.S, Gruber, K, Cavada, B.S.
登録日2014-11-04
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural characterization of a Vatairea macrocarpa lectin in complex with a tumor-associated antigen: A new tool for cancer research.
Int.J.Biochem.Cell Biol., 72, 2016
7JTL
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BU of 7jtl by Molmil
Structure of SARS-CoV-2 ORF8 accessory protein
分子名称: ORF8 protein, SODIUM ION
著者Flower, T.G, Buffalo, C.Z, Hooy, R.M, Allaire, M, Ren, X, Hurley, J.H.
登録日2020-08-18
公開日2020-08-26
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of SARS-CoV-2 ORF8, a rapidly evolving immune evasion protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
4ZVB
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BU of 4zvb by Molmil
Crystal structure of globin domain of the E. coli DosC - form II (ferrous)
分子名称: Diguanylate cyclase DosC, PROTOPORPHYRIN IX CONTAINING FE
著者Tarnawski, M, Barends, T.R.M, Schlichting, I.
登録日2015-05-18
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4XOU
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BU of 4xou by Molmil
Crystal structure of the SR Ca2+-ATPase in the Ca2-E1-MgAMPPCP form determined by serial femtosecond crystallography using an X-ray free-electron laser.
分子名称: CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ...
著者Bublitz, M, Nass, K, Drachmann, N.D, Markvardsen, A.J, Gutmann, M.J, Barends, T.R.M, Mattle, D, Shoeman, R.L, Doak, R.B, Boutet, S, Messerschmidt, M, Seibert, M.M, Williams, G.J, Foucar, L, Reinhard, L, Sitsel, O, Gregersen, J.L, Clausen, J.D, Boesen, T, Gotfryd, K, Wang, K.-T, Olesen, C, Moller, J.V, Nissen, P, Schlichting, I.
登録日2015-01-16
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural studies of P-type ATPase-ligand complexes using an X-ray free-electron laser.
Iucrj, 2, 2015
4YU7
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BU of 4yu7 by Molmil
Crystal structure of Piratoxin I (PrTX-I) complexed to caffeic acid
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Basic phospholipase A2 homolog piratoxin-1, CAFFEIC ACID, ...
著者Fernandes, C.A.H, Fontes, M.R.M.
登録日2015-03-18
公開日2015-08-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.647 Å)
主引用文献Structural Basis for the Inhibition of a Phospholipase A2-Like Toxin by Caffeic and Aristolochic Acids.
Plos One, 10, 2015
4ZVF
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BU of 4zvf by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form II (GTP-alpha-S-bound)
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Diguanylate cyclase DosC, ...
著者Tarnawski, M, Barends, T.R.M, Schlichting, I.
登録日2015-05-18
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4ZVG
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BU of 4zvg by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form III
分子名称: Diguanylate cyclase DosC
著者Tarnawski, M, Barends, T.R.M, Schlichting, I.
登録日2015-05-18
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4ZVC
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BU of 4zvc by Molmil
Crystal structure of MID domain of the E. coli DosC - form I
分子名称: BENZOIC ACID, Diguanylate cyclase DosC
著者Tarnawski, M, Barends, T.R.M, Schlichting, I.
登録日2015-05-18
公開日2015-11-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4ZVD
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BU of 4zvd by Molmil
Crystal structure of MID domain of the E. coli DosC - form II
分子名称: Diguanylate cyclase DosC
著者Tarnawski, M, Barends, T.R.M, Schlichting, I.
登録日2015-05-18
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4ZVH
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BU of 4zvh by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form IV
分子名称: Diguanylate cyclase DosC, SULFATE ION
著者Tarnawski, M, Barends, T.R.M, Schlichting, I.
登録日2015-05-18
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4LPA
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BU of 4lpa by Molmil
Crystal structure of a Cdc6 phosphopeptide in complex with Cks1
分子名称: Cyclin-dependent kinases regulatory subunit
著者McGrath, D.A, Balog, E.R.M, Koivomagi, M, Lucena, R, Mai, M.V, Hirschi, A, Kellogg, D.R, Loog, M, Rubin, S.M.
登録日2013-07-15
公開日2013-11-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Cks confers specificity to phosphorylation-dependent CDK signaling pathways.
Nat.Struct.Mol.Biol., 20, 2013
7M02
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BU of 7m02 by Molmil
Structure of SARS-CoV-2 3CL protease in complex with inhibitor 17c
分子名称: (1R,2S)-2-((S)-2-((((2-fluorobenzyl)oxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((R)-2-oxo-3,4-dihydro-2H-pyrrol-3-yl)propane-1-sulfonic acid, (1S,2S)-2-((S)-2-((((2-fluorobenzyl)oxy)carbonyl)amino)-4-methylpentanamido)-1-hydroxy-3-((R)-2-oxo-3,4-dihydro-2H-pyrrol-3-yl)propane-1-sulfonic acid, 3C-like proteinase, ...
著者Lovell, S, Kashipathy, M.M, Battaile, K.P, Chamandi, S.D, Rathnayake, A.D, Kim, Y, Perera, K.D, Jesri, A.R.M, Nguyen, H.N, Baird, M.A, Miller, M.J, Groutas, W.C, Chang, K.O.
登録日2021-03-10
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Guided Design of Potent Inhibitors of SARS-CoV-2 3CL Protease: Structural, Biochemical, and Cell-Based Studies.
J.Med.Chem., 64, 2021
4N4K
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BU of 4n4k by Molmil
Kuenenia stuttgartiensis hydroxylamine oxidoreductase soaked in hydroxylamine
分子名称: 1,2-ETHANEDIOL, HEME C, HYDROXYAMINE, ...
著者Maalcke, W.J, Dietl, A, Marritt, S.J, Butt, J.N, Jetten, M.S.M, Keltjens, J.T, Barends, T.R.M.B, Kartal, B.
登録日2013-10-08
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis of Biological NO Generation by Octaheme Oxidoreductases.
J.Biol.Chem., 289, 2014
4N4J
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BU of 4n4j by Molmil
Kuenenia stuttgartiensis hydroxylamine oxidoreductase
分子名称: 1-[(4-cyclohexylbutanoyl)(2-hydroxyethyl)amino]-1-deoxy-D-glucitol, HEME C, PHOSPHATE ION, ...
著者Maalcke, W.J, Dietl, A, Marritt, S.J, Butt, J.N, Jetten, M.S.M, Keltjens, J.T, Barends, T.R.M.B, Kartal, B.
登録日2013-10-08
公開日2013-12-11
最終更新日2020-03-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of Biological NO Generation by Octaheme Oxidoreductases.
J.Biol.Chem., 289, 2014
4LJ5
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BU of 4lj5 by Molmil
ClpB NBD2 from T. thermophilus in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
4LJA
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BU of 4lja by Molmil
ClpB NBD2 R621Q from T. thermophilus in complex with AMPPCP and guanidinium chloride
分子名称: Chaperone protein ClpB, GUANIDINE, MAGNESIUM ION, ...
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
4LJ8
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BU of 4lj8 by Molmil
ClpB NBD2 R621Q from T. thermophilus in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
4MAE
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BU of 4mae by Molmil
Methanol dehydrogenase from Methylacidiphilum fumariolicum SolV
分子名称: CERIUM (III) ION, Methanol dehydrogenase, POLYETHYLENE GLYCOL (N=34), ...
著者Pol, A.J, Barends, T.R.M, Dietl, A, Khadem, A.F, Eygenstein, J, Jetten, M.S.M, Op den Camp, H.J.M.
登録日2013-08-16
公開日2013-09-18
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rare earth metals are essential for methanotrophic life in volcanic mudpots.
ENVIRON.MICROBIOL., 16, 2014
7LYE
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BU of 7lye by Molmil
Myotoxin I from Bothrops moojeni co-crystallized with synthetic inhibitor Varespladib (LY315920)
分子名称: ({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Basic phospholipase A2 homolog BomoTx
著者Salvador, G.H.M, Borges, R.J, Fontes, M.R.M.
登録日2021-03-06
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.758 Å)
主引用文献The synthetic varespladib molecule is a multi-functional inhibitor for PLA 2 and PLA 2 -like ophidic toxins.
Biochim Biophys Acta Gen Subj, 1865, 2021
7M60
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BU of 7m60 by Molmil
Structure of Mouse Importin alpha MLH1-S467A NLS Peptide Complex
分子名称: DNA mismatch repair protein Mlh1 NLS peptide, Importin subunit alpha-1
著者De Oliveira, H.C, Da Silva, T.D, Fukuda, C.A, Fontes, M.R.M.
登録日2021-03-25
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and calorimetric studies reveal specific determinants for the binding of a high-affinity NLS to mammalian importin-alpha.
Biochem.J., 478, 2021
4LJ4
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BU of 4lj4 by Molmil
ClpB NBD2 from T. thermophilus, nucleotide-free
分子名称: Chaperone protein ClpB, PHOSPHATE ION
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
4LJ7
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BU of 4lj7 by Molmil
ClpB NBD2 K601Q from T. thermophilus in complex with MANT-dADP
分子名称: 2'(3')-O-N-METHYLANTHRANILOYL-ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHATE ION
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
4LJ6
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BU of 4lj6 by Molmil
ClpB NBD2 from T. thermophilus in complex with AMPPCP
分子名称: Chaperone protein ClpB, PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014

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