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PDB: 2308 results

2MP5
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Structure of Bitistatin B
Descriptor: Disintegrin bitistatin
Authors:Carbajo, R.J, Calvete, J, Sanz, L, Perez, A.
Deposit date:2014-05-11
Release date:2014-11-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure of bitistatin - a missing piece in the evolutionary pathway of snake venom disintegrins.
Febs J., 282, 2015
2QK9
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BU of 2qk9 by Molmil
Human RNase H catalytic domain mutant D210N in complex with 18-mer RNA/DNA hybrid
Descriptor: 5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*T)-3', 5'-R(*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3', CITRATE ANION, ...
Authors:Nowotny, M, Gaidamakov, S.A, Ghirlando, R, Cerritelli, S.M, Crouch, R.J, Yang, W.
Deposit date:2007-07-10
Release date:2007-11-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of Human RNase H1 Complexed with an RNA/DNA Hybrid: Insight into HIV Reverse Transcription
Mol.Cell, 28, 2007
2QKB
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Human RNase H catalytic domain mutant D210N in complex with 20-mer RNA/DNA hybrid
Descriptor: 1,2-ETHANEDIOL, 5'-D(*DGP*DGP*DAP*DAP*DTP*DCP*DAP*DGP*DGP*DTP*DGP*DTP*DCP*DGP*DCP*DAP*DCP*DTP*DCP*DT)-3', 5'-R(*GP*GP*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3'), ...
Authors:Nowotny, M, Gaidamakov, S.A, Ghirlando, R, Cerritelli, S.M, Crouch, R.J, Yang, W.
Deposit date:2007-07-10
Release date:2007-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Human RNase H1 Complexed with an RNA/DNA Hybrid: Insight into HIV Reverse Transcription
Mol.Cell, 28, 2007
2QKK
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Human RNase H catalytic domain mutant D210N in complex with 14-mer RNA/DNA hybrid
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*G)-3', ...
Authors:Nowotny, M, Gaidamakov, S.A, Ghirlando, R, Cerritelli, S.M, Crouch, R.J, Yang, W.
Deposit date:2007-07-11
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of Human RNase H1 Complexed with an RNA/DNA Hybrid: Insight into HIV Reverse Transcription
Mol.Cell, 28, 2007
2QFH
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BU of 2qfh by Molmil
Solution Structure of the C-terminal SCR-16/20 fragment of Complement Factor H.
Descriptor: Complement factor H
Authors:Okemefuna, A.I, Gilbert, H.E, Griggs, K.M, Ormsby, R.J, Gordon, D.L, Perkins, S.J.
Deposit date:2007-06-27
Release date:2007-09-25
Last modified:2024-02-21
Method:SOLUTION SCATTERING
Cite:The regulatory SCR-1/5 and cell surface-binding SCR-16/20 fragments of factor H reveal partially folded-back solution structures and different self-associative properties.
J.Mol.Biol., 375, 2008
5OUP
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BU of 5oup by Molmil
Structure of TgPLP1 MACPF domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
4C35
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PKA-S6K1 Chimera with compound 1 (NU1085) bound
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(4-hydroxyphenyl)-1H-benzimidazole-4-carboxamide, CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA, ...
Authors:Couty, S, Westwood, I.M, Kalusa, A, Cano, C, Travers, J, Boxall, K, Chow, C.L, Burns, S, Schmitt, J, Pickard, L, Barillari, C, McAndrew, P.C, Clarke, P.A, Linardopoulos, S, Griffin, R.J, Aherne, G.W, Raynaud, F.I, Workman, P, Jones, K, van Montfort, R.L.M.
Deposit date:2013-08-21
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The discovery of potent ribosomal S6 kinase inhibitors by high-throughput screening and structure-guided drug design.
Oncotarget, 4, 2013
4C7I
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BU of 4c7i by Molmil
Leismania major N-myristoyltransferase in complex with a peptidomimetic (-OH) molecule
Descriptor: DIMETHYL SULFOXIDE, GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, MAGNESIUM ION, ...
Authors:Olaleye, T.O, Brannigan, J.A, Goncalves, V, Roberts, S.M, Leatherbarrow, R.J, Wilkinson, A.J, Tate, E.W.
Deposit date:2013-09-20
Release date:2014-09-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Peptidomimetic Inhibitors of N-Myristoyltransferase from Human Malaria and Leishmaniasis Parasites.
Org.Biomol.Chem., 12, 2014
1MVI
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BU of 1mvi by Molmil
N-TYPE CALCIUM CHANNEL BLOCKER, OMEGA-CONOTOXIN MVIIA, NMR, 15 STRUCTURES
Descriptor: MVIIA
Authors:Nielsen, K.J, Thomas, L, Lewis, R.J, Alewood, P.F, Craik, D.J.
Deposit date:1996-08-02
Release date:1997-08-12
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:A consensus structure for omega-conotoxins with different selectivities for voltage-sensitive calcium channel subtypes: comparison of MVIIA, SVIB and SNX-202.
J.Mol.Biol., 263, 1996
2J94
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BU of 2j94 by Molmil
CRYSTAL STRUCTURE OF A HUMAN FACTOR XA INHIBITOR COMPLEX
Descriptor: 5-(5-CHLORO-2-THIENYL)-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}-1H-1,2,4-TRIAZOLE-3-SULFONAMIDE, CALCIUM ION, COAGULATION FACTOR X
Authors:Chan, C, Borthwick, A.D, Brown, D, Campbell, M, Chaudry, L, Chung, C.W, Convery, M.A, Hamblin, J.N, Johnstone, L, Kelly, H.A, Kleanthous, S, Burns-Kurtis, C.L, Patikis, A, Patel, C, Pateman, A.J, Senger, S, Shah, G.P, Toomey, J.R, Watson, N.S, Weston, H.E, Whitworth, C, Young, R.J, Zhou, P.
Deposit date:2006-11-02
Release date:2007-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Factor Xa Inhibitors: S1 Binding Interactions of a Series of N-{(3S)-1-[(1S)-1-Methyl-2-Morpholin-4-Yl-2-Oxoethyl]-2-Oxopyrrolidin-3-Yl}Sulfonamides.
J.Med.Chem., 50, 2007
4C0U
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BU of 4c0u by Molmil
Cryo-EM reconstruction of enterovirus 71 in complex with a neutralizing antibody E18
Descriptor: FAB EV18 4 D6-1 F1 G9, VP1, VP2, ...
Authors:Plevka, P, Perera, R, Cardosa, J, Suksatu, A, Kuhn, R.J, Rossmann, M.G.
Deposit date:2013-08-08
Release date:2014-02-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Neutralizing Antibodies Can Initiate Genome Release from Human Enterovirus 71.
Proc.Natl.Acad.Sci.USA, 111, 2014
4C33
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BU of 4c33 by Molmil
PKA-S6K1 Chimera Apo
Descriptor: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA
Authors:Couty, S, Westwood, I.M, Kalusa, A, Cano, C, Travers, J, Boxall, K, Chow, C.L, Burns, S, Schmitt, J, Pickard, L, Barillari, C, McAndrew, P.C, Clarke, P.A, Linardopoulos, S, Griffin, R.J, Aherne, G.W, Raynaud, F.I, Workman, P, Jones, K, van Montfort, R.L.M.
Deposit date:2013-08-21
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The discovery of potent ribosomal S6 kinase inhibitors by high-throughput screening and structure-guided drug design.
Oncotarget, 4, 2013
2J70
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BU of 2j70 by Molmil
Structural and functional characterisation of partner-switching regulating the environmental stress response in B. subtilis
Descriptor: PHOSPHOSERINE PHOSPHATASE RSBU
Authors:Hardwick, S.W, Pane-Farre, J, Delumeau, O, Marles-Wright, J, Murray, J.W, Hecker, M, Lewis, R.J.
Deposit date:2006-10-05
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional characterization of partner switching regulating the environmental stress response in Bacillus subtilis.
J. Biol. Chem., 282, 2007
1MVJ
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BU of 1mvj by Molmil
N-TYPE CALCIUM CHANNEL BLOCKER, OMEGA-CONOTOXIN MVIIA NMR, 15 STRUCTURES
Descriptor: SVIB
Authors:Nielsen, K.J, Thomas, L, Lewis, R.J, Alewood, P.F, Craik, D.J.
Deposit date:1996-08-02
Release date:1997-08-12
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:A consensus structure for omega-conotoxins with different selectivities for voltage-sensitive calcium channel subtypes: comparison of MVIIA, SVIB and SNX-202.
J.Mol.Biol., 263, 1996
1N1U
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BU of 1n1u by Molmil
NMR structure of [Ala1,15]kalata B1
Descriptor: kalata B1
Authors:Daly, N.L, Clark, R.J, Craik, D.J.
Deposit date:2002-10-20
Release date:2003-02-25
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Disulfide Folding Pathways of Cystine Knot Proteins. TYING THE KNOT WITHIN THE CIRCULAR BACKBONE OF THE CYCLOTIDES
J.Biol.Chem., 278, 2003
5OUO
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BU of 5ouo by Molmil
Structure of TgPLP1 APCbeta domain
Descriptor: CHLORIDE ION, MAGNESIUM ION, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
2J4I
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BU of 2j4i by Molmil
CRYSTAL STRUCTURE OF A HUMAN FACTOR XA INHIBITOR COMPLEX
Descriptor: 1-PYRROLIDINEACETAMIDE, 3-[[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]AMINO]-ALPHA-METHYL-N-(1-METHYLETHYL)-N-[2-[(METHYLSULFONYL)AMINO]ETHYL]-2-OXO-, (ALPHAS,3S)-, ...
Authors:Young, R.J, Campbell, M, Borthwick, A.D, Brown, D, Chan, C, Convery, M.A, Crowe, M.C, Dayal, S, Diallo, H, Kelly, H.A, Paul King, N, Kleanthous, S, Kurtis, C.L, Mason, A.M, Mordaunt, J.E, Patel, C, Pateman, A.J, Senger, S, Shah, G.P, Smith, P.W, Watson, N.S, Weston, H.E, Zhou, P.
Deposit date:2006-08-31
Release date:2006-09-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure- and Property-Based Design of Factor Xa Inhibitors: Pyrrolidin-2-Ones with Acyclic Alanyl Amides as P4 Motifs.
Bioorg.Med.Chem.Lett., 16, 2006
5OUQ
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BU of 5ouq by Molmil
Structure of TgPLP1 MACPF domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Perforin-like protein 1
Authors:Ni, T, Gilbert, R.J.C.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (5.11 Å)
Cite:Structures of monomeric and oligomeric forms of theToxoplasma gondiiperforin-like protein 1.
Sci Adv, 4, 2018
4CMF
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BU of 4cmf by Molmil
The (R)-selective transaminase from Nectria haematococca with inhibitor bound
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID, AMINOTRANSFERASE, ...
Authors:Sayer, C, Isupov, M, Martinez-Torres, R.J, Richter, N, Hailes, H.C, Ward, J, Littlechild, J.
Deposit date:2014-01-16
Release date:2014-03-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Substrate Specificity, Enantioselectivity and Structure of the (R)-Selective Amine:Pyruvate Transaminase from Nectria Haematococca.
FEBS J., 281, 2014
2J6Z
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BU of 2j6z by Molmil
Structural and functional characterisation of partner-switching regulating the environmental stress response in B. subtilis
Descriptor: PHOSPHOSERINE PHOSPHATASE RSBU
Authors:Hardwick, S.W, Pane-Farre, J, Delumeau, O, Marles-Wright, J, Murray, J.W, Hecker, M, Lewis, R.J.
Deposit date:2006-10-05
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional characterization of partner switching regulating the environmental stress response in Bacillus subtilis.
J. Biol. Chem., 282, 2007
7R6R
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BU of 7r6r by Molmil
Crystal Structure of a Mycobacteriophage Cluster A2 Immunity Repressor:DNA Complex
Descriptor: DNA (5'-D(P*CP*CP*CP*GP*CP*TP*TP*GP*AP*CP*AP*GP*CP*CP*AP*CP*CP*GP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*CP*GP*GP*TP*GP*GP*CP*TP*GP*TP*CP*AP*AP*GP*CP*GP*GP*G)-3'), Immunity repressor
Authors:McGinnis, R.J, Brambley, C.A, Stamey, B, Green, W.C, Gragg, K.N, Cafferty, E.R, Terwilliger, T.C, Hammel, M, Hollis, T.J, Miller, J.M, Gainey, M.D, Wallen, J.R.
Deposit date:2021-06-23
Release date:2022-07-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence.
Nat Commun, 13, 2022
2JTP
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BU of 2jtp by Molmil
Solution Structure of the Frameshift-Inducing RNA Stem-Loop in SIV
Descriptor: SIV17-50 RNA (34-MER)
Authors:Marcheschi, R.J, Staple, D.W, Butcher, S.E.
Deposit date:2007-08-04
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Programmed Ribosomal Frameshifting in SIV Is Induced by a Highly Structured RNA Stem-Loop
J.Mol.Biol., 373, 2007
5OPG
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BU of 5opg by Molmil
Structure of the Hantaan virus Gn glycoprotein ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Rissanen, I, Stass, R, Zeltina, A, Li, S, Hepojoki, J, Harlos, K, Gilbert, R.J.C, Huiskonen, J.T, Bowden, T.A.
Deposit date:2017-08-09
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Transitions of the Conserved and Metastable Hantaviral Glycoprotein Envelope.
J. Virol., 91, 2017
4UFI
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BU of 4ufi by Molmil
Mouse Galactocerebrosidase complexed with aza-galacto-fagomine AGF
Descriptor: (3R,4S,5R)-3-(hydroxymethyl)-1,2-diazinane-4,5-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hill, C.H, Viuff, A.H, Spratley, S.J, Salamone, S, Christensen, S.H, Read, R.J, Moriarty, N.W, Jensen, H.H, Deane, J.E.
Deposit date:2015-03-17
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Azasugar Inhibitors as Pharmacological Chaperones for Krabbe Disease.
Chem.Sci., 6, 2015
7ROX
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BU of 7rox by Molmil
BthTX-I complexed with inhibitor MMV
Descriptor: 12-methoxy-Nb-methylvoachalotine, Basic phospholipase A2 homolog bothropstoxin-I
Authors:Borges, R.J, De Marino, I, Uson, I, Fontes, M.R.M.
Deposit date:2021-08-02
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional studies of a snake venom phospholipase A 2 -like protein complexed to an inhibitor from Tabernaemontana catharinensis.
Biochimie, 206, 2023

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