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PDB: 2342 results

3RV9
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Structure of a M. tuberculosis Salicylate Synthase, MbtI, in Complex with an Inhibitor with Ethyl R-Group
Descriptor: 3-{[(1Z)-1-carboxybut-1-en-1-yl]oxy}-2-hydroxybenzoic acid, Isochorismate synthase/isochorismate-pyruvate lyase mbtI
Authors:Chi, G, Bulloch, E.M.M, Manos-Turvey, A, Payne, R.J, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-05-06
Release date:2012-05-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Implications of binding mode and active site flexibility for inhibitor potency against the salicylate synthase from Mycobacterium tuberculosis
Biochemistry, 51, 2012
2B38
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Solution structure of kalata B8
Descriptor: kalata B8
Authors:Daly, N.L, Clark, R.J, Plan, M.R, Craik, D.J.
Deposit date:2005-09-19
Release date:2006-01-31
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Kalata B8, a novel antiviral circular protein, exhibits conformational flexibility in the cystine knot motif
Biochem.J., 393, 2006
3RV8
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Structure of a M. tuberculosis Salicylate Synthase, MbtI, in Complex with an Inhibitor with Cyclopropyl R-Group
Descriptor: 3-{[(E)-1-carboxy-2-cyclopropylethenyl]oxy}-2-hydroxybenzoic acid, 3-{[(Z)-1-carboxy-2-cyclopropylethenyl]oxy}-2-hydroxybenzoic acid, Isochorismate synthase/isochorismate-pyruvate lyase mbtI
Authors:Chi, G, Bulloch, E.M.M, Manos-Turvey, A, Payne, R.J, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-05-06
Release date:2012-05-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Implications of binding mode and active site flexibility for inhibitor potency against the salicylate synthase from Mycobacterium tuberculosis
Biochemistry, 51, 2012
5ANQ
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BU of 5anq by Molmil
inhibitors of JumonjiC domain-containing histone demethylases
Descriptor: 2-{2-[(pyridin-3-ylmethyl)amino]pyrimidin-4-yl}pyridine-4-carboxylic acid, CHLORIDE ION, FE (II) ION, ...
Authors:Roatsch, M, Robaa, D, Pippel, M, Nettleship, J.E, Reddivari, Y, Bird, L.E, Hoffmann, I, Franz, H, Owens, R.J, Schuele, R, Flaig, R, Sippl, W, Jung, M.
Deposit date:2015-09-07
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substituted 2-(2-Aminopyrimidin-4-Yl)Pyridine-4-Carboxylates as Potent Inhibitors of Jumonjic Domain-Containing Histone Demethylases.
Fut.Med.Chem., 8, 2016
1XZX
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BU of 1xzx by Molmil
Thyroxine-Thyroid Hormone Receptor Interactions
Descriptor: 3,5,3'TRIIODOTHYRONINE, CACODYLATE ION, Thyroid hormone receptor beta-1
Authors:Sandler, B, Webb, P, Apriletti, J.W, Huber, B.R, Togashi, M, Cunha Lima, S.T, Juric, S, Nilsson, S, Wagner, R, Fletterick, R.J, Baxter, J.D.
Deposit date:2004-11-12
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Thyroxine-thyroid hormone receptor interactions.
J.Biol.Chem., 279, 2004
2B4P
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BU of 2b4p by Molmil
Structure of the D223N mutant of Selenomonas ruminantium PTP-like phytase
Descriptor: CHLORIDE ION, MALONATE ION, myo-inositol hexaphosphate phosphohydrolase
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2005-09-26
Release date:2006-11-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Kinetic and structural analysis of a bacterial protein tyrosine phosphatase-like myo-inositol polyphosphatase.
Protein Sci., 16, 2007
2AJW
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BU of 2ajw by Molmil
Structure of the cyclic conotoxin MII-6
Descriptor: Alpha-conotoxin MII
Authors:Clark, R.J, Fischer, H, Dempster, L, Daly, N.L, Rosengren, K.J, Nevin, S.T, Meunier, F.A, Adams, D.J, Craik, D.J.
Deposit date:2005-08-02
Release date:2005-09-06
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Engineering stable peptide toxins by means of backbone cyclization: Stabilization of the {alpha}-conotoxin MII.
Proc.Natl.Acad.Sci.USA, 102, 2005
2AUG
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BU of 2aug by Molmil
Crystal structure of the Grb14 SH2 domain
Descriptor: Growth factor receptor-bound protein 14
Authors:Depetris, R.S, Hu, J, Gimpelevich, I, Holt, L.J, Daly, R.J, Hubbard, S.R.
Deposit date:2005-08-27
Release date:2005-11-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of the insulin receptor by the adaptor protein grb14.
Mol.Cell, 20, 2005
3S13
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Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
Authors:DuBois, R.M, Zaraket, H, Reddivari, M, Heath, R.J, White, S.W, Russell, C.J.
Deposit date:2011-05-14
Release date:2011-12-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity.
Plos Pathog., 7, 2011
2AJ4
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BU of 2aj4 by Molmil
Crystal structure of Saccharomyces cerevisiae Galactokinase in complex with galactose and Mg:AMPPNP
Descriptor: CHLORIDE ION, Galactokinase, MAGNESIUM ION, ...
Authors:Thoden, J.B, Sellick, C.A, Timson, D.J, Reece, R.J, Holden, H.M.
Deposit date:2005-08-01
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular structure of Saccharomyces cerevisiae Gal1p, a bifunctional galactokinase and transcriptional inducer
J.Biol.Chem., 280, 2005
3RV6
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Structure of a M. tuberculosis Salicylate Synthase, MbtI, in Complex with an Inhibitor with Phenyl R-Group
Descriptor: 3-{[(E)-1-carboxy-2-phenylethenyl]oxy}-2-hydroxybenzoic acid, 3-{[(Z)-1-carboxy-2-phenylethenyl]oxy}-2-hydroxybenzoic acid, Isochorismate synthase/isochorismate-pyruvate lyase mbtI, ...
Authors:Chi, G, Bulloch, E.M.M, Manos-Turvey, A, Payne, R.J, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-05-06
Release date:2012-05-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Implications of binding mode and active site flexibility for inhibitor potency against the salicylate synthase from Mycobacterium tuberculosis
Biochemistry, 51, 2012
3RV7
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BU of 3rv7 by Molmil
Structure of a M. tuberculosis Salicylate Synthase, MbtI, in Complex with an Inhibitor with Isopropyl R-Group
Descriptor: 3-{[(1Z)-1-carboxy-3-methylbut-1-en-1-yl]oxy}-2-hydroxybenzoic acid, Isochorismate synthase/isochorismate-pyruvate lyase mbtI
Authors:Chi, G, Bulloch, E.M.M, Manos-Turvey, A, Payne, R.J, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-05-06
Release date:2012-05-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Implications of binding mode and active site flexibility for inhibitor potency against the salicylate synthase from Mycobacterium tuberculosis
Biochemistry, 51, 2012
1Z7Z
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Cryo-em structure of human coxsackievirus A21 complexed with five domain icam-1kilifi
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Intercellular adhesion molecule-1, human coxsackievirus A21
Authors:Xiao, C, Bator-Kelly, C.M, Rieder, E, Chipman, P.R, Craig, A, Kuhn, R.J, Wimmer, E, Rossmann, M.G.
Deposit date:2005-03-28
Release date:2005-08-02
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (8 Å)
Cite:The crystal structure of coxsackievirus a21 and its interaction with icam-1.
Structure, 13, 2005
1ZUC
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BU of 1zuc by Molmil
Progesterone receptor ligand binding domain in complex with the nonsteroidal agonist tanaproget
Descriptor: 5-(4,4-DIMETHYL-2-THIOXO-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-6-YL)-1-METHYL-1H-PYRROLE-2-CARBONITRILE, Progesterone receptor, SULFATE ION
Authors:Zhang, Z, Olland, A.M, Zhu, Y, Cohen, J, Berrodin, T, Chippari, S, Appavu, C, Li, S, Wilhem, J, Chopra, R, Fensome, A, Zhang, P, Wrobel, J, Unwalla, R.J, Lyttle, C.R, Winneker, R.C.
Deposit date:2005-05-30
Release date:2005-07-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular and pharmacological properties of a potent and selective novel nonsteroidal progesterone receptor agonist tanaproget
J.Biol.Chem., 280, 2005
231D
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BU of 231d by Molmil
STRUCTURE OF A DNA-PORPHYRIN COMPLEX
Descriptor: CU(II)MESO(4-N-TETRAMETHYLPYRIDYL)PORPHYRIN, DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'), SODIUM ION
Authors:Lipscomb, L.A, Zhou, F.X, Presnell, S.R, Woo, R.J, Peek, M.E, Plaskon, R.R, Williams, L.D.
Deposit date:1995-08-25
Release date:1996-03-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of DNA-porphyrin complex.
Biochemistry, 35, 1996
3S9V
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BU of 3s9v by Molmil
abietadiene synthase from Abies grandis
Descriptor: Abietadiene synthase, chloroplastic
Authors:Zhou, K, Hoy, J.A, Mann, F.M, Honzatko, R.B, Peters, R.J.
Deposit date:2011-06-02
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into diterpene cyclization from structure of bifunctional abietadiene synthase from Abies grandis.
J.Biol.Chem., 287, 2012
1ZBI
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BU of 1zbi by Molmil
Bacillus halodurans RNase H catalytic domain mutant D132N in complex with 12-mer RNA/DNA hybrid
Descriptor: 5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3', 5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*C)-3', MAGNESIUM ION, ...
Authors:Nowotny, M, Gaidamakov, S.A, Crouch, R.J, Yang, W.
Deposit date:2005-04-08
Release date:2005-07-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis.
Cell(Cambridge,Mass.), 121, 2005
1ZBF
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BU of 1zbf by Molmil
Crystal structure of B. halodurans RNase H catalytic domain mutant D132N
Descriptor: SULFATE ION, ribonuclease H-related protein
Authors:Nowotny, M, Gaidamakov, S.A, Crouch, R.J, Yang, W.
Deposit date:2005-04-08
Release date:2005-07-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of RNase H Bound to an RNA/DNA Hybrid: Substrate Specificity and Metal-Dependent Catalysis.
Cell(Cambridge,Mass.), 121, 2005
1Z7X
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BU of 1z7x by Molmil
X-ray structure of human ribonuclease inhibitor complexed with ribonuclease I
Descriptor: CITRIC ACID, Ribonuclease I, Ribonuclease inhibitor
Authors:McCoy, J.G, Johnson, R.J, Raines, R.T, Bitto, E, Bingman, C.A, Wesenberg, G.E, Allard, S.T.M, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-03-28
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Inhibition of human pancreatic ribonuclease by the human ribonuclease inhibitor protein.
J.Mol.Biol., 368, 2007
3S12
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BU of 3s12 by Molmil
Crystal structure of H5N1 influenza virus hemagglutinin, strain YU562 crystal form 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:DuBois, R.M, Zaraket, H, Reddivari, M, Heath, R.J, White, S.W, Russell, C.J.
Deposit date:2011-05-14
Release date:2011-12-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Acid stability of the hemagglutinin protein regulates H5N1 influenza virus pathogenicity.
Plos Pathog., 7, 2011
3OCN
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BU of 3ocn by Molmil
Crystal structure of penicillin-binding protein 3 from Pseudomonas aeruginosa in complex with ceftazidime
Descriptor: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, penicillin-binding protein 3
Authors:Sainsbury, S, Bird, L, Stuart, D.I, Owens, R.J, Ren, J, Oxford Protein Production Facility (OPPF)
Deposit date:2010-08-10
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structures of penicillin-binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms
J.Mol.Biol., 405, 2011
1QNU
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BU of 1qnu by Molmil
Shiga-Like Toxin I B Subunit Complexed with the Bridged-Starfish Inhibitor
Descriptor: ETHYL-CARBAMIC ACID METHYL ESTER, METHYL-CARBAMIC ACID ETHYL ESTER, Shiga toxin 1 variant B subunit, ...
Authors:Pannu, N.S, Hayakawa, K, Read, R.J.
Deposit date:1999-10-21
Release date:2000-04-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Shiga-like toxins are neutralized by tailored multivalent carbohydrate ligands.
Nature, 403, 2000
2F2I
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BU of 2f2i by Molmil
Solution structure of [P20D,V21K]-kalata B1
Descriptor: Kalata-B1
Authors:Clark, R.J, Daly, N.L, Craik, D.J.
Deposit date:2005-11-17
Release date:2006-01-31
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Structural plasticity of the cyclic cystine knot framework: implications for biological activity and drug design
Biochem.J., 394, 2006
3OCL
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BU of 3ocl by Molmil
Crystal structure of penicillin-binding protein 3 from Pseudomonas aeruginosa in complex with carbenicillin
Descriptor: (2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Sainsbury, S, Bird, L, Stuart, D.I, Owens, R.J, Ren, J, Oxford Protein Production Facility (OPPF)
Deposit date:2010-08-10
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of penicillin-binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms
J.Mol.Biol., 405, 2011
1YP7
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Van der Waals Interactions Dominate Hydrophobic Association in a Protein Binding Site Occluded From Solvent Water
Descriptor: CADMIUM ION, MAJOR URINARY PROTEIN 1
Authors:Barratt, E, Bingham, R.J, Warner, D.J, Laughton, C.A, Phillips, S.E.V, Homans, S.W.
Deposit date:2005-01-30
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Van der Waals Interactions Dominate Ligand-Protein Association in a Protein Binding Site Occluded from Solvent Water
J.Am.Chem.Soc., 127, 2005

225946

數據於2024-10-09公開中

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