Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2325 results

4CGL
DownloadVisualize
BU of 4cgl by Molmil
Leishmania major N-myristoyltransferase in complex with an aminoacylpyrrolidine inhibitor
Descriptor: (3R)-3-azanyl-4-(4-chlorophenyl)-1-[(3S,4R)-3-(4-chlorophenyl)-4-(hydroxymethyl)pyrrolidin-1-yl]butan-1-one, GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, MAGNESIUM ION, ...
Authors:Brannigan, J.A, Roberts, S.M, Bell, A.S, Hutton, J.A, Smith, D.F, Tate, E.W, Leatherbarrow, R.J, Wilkinson, A.J.
Deposit date:2013-11-25
Release date:2014-07-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Diverse Modes of Binding in Structures of Leishmania Major N-Myristoyltransferase with Selective Inhibitors
Iucrj, 1, 2014
7T2Q
DownloadVisualize
BU of 7t2q by Molmil
PEGylated Calmodulin-1 (K148U)
Descriptor: CALCIUM ION, Calmodulin-1, MAGNESIUM ION, ...
Authors:Mackay, J.P, Payne, R.J, Patel, K, Dowman, L.J.
Deposit date:2021-12-06
Release date:2022-10-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Site-selective photocatalytic functionalization of peptides and proteins at selenocysteine.
Nat Commun, 13, 2022
1M5X
DownloadVisualize
BU of 1m5x by Molmil
Crystal structure of the homing endonuclease I-MsoI bound to its DNA substrate
Descriptor: 5'-D(*CP*GP*GP*AP*AP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*TP*CP*TP*GP*C)-3', 5'-D(*GP*CP*AP*GP*AP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*TP*TP*CP*CP*G)-3', CALCIUM ION, ...
Authors:Chevalier, B, Turmel, M, Lemieux, C, Monnat, R.J, Stoddard, B.L.
Deposit date:2002-07-10
Release date:2003-06-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Flexible DNA Target Site Recognition by Divergent Homing Endonuclease Isoschizomers I-CreI and I-MsoI
J.Mol.Biol., 329, 2003
4Q4I
DownloadVisualize
BU of 4q4i by Molmil
Crystal structure of E.coli aminopeptidase N in complex with amastatin
Descriptor: Amastatin, Aminopeptidase N, GLYCEROL, ...
Authors:Reddi, R, Ganji, R.J, Addlagatta, A.
Deposit date:2014-04-14
Release date:2015-04-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for the inhibition of M1 family aminopeptidases by the natural product actinonin: Crystal structure in complex with E. coli aminopeptidase N.
Protein Sci., 24, 2015
6EOF
DownloadVisualize
BU of 6eof by Molmil
Crystal structure of AMPylated GRP78 in ADP state
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Yan, Y, Preissler, S, Read, R.J, Ron, D.
Deposit date:2017-10-09
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation.
Elife, 6, 2017
7TM3
DownloadVisualize
BU of 7tm3 by Molmil
Structure of the rabbit 80S ribosome stalled on a 2-TMD Rhodopsin intermediate in complex with the multipass translocon
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kim, M.K, Lewis, A.J.O, Keenan, R.J, Hegde, R.S.
Deposit date:2022-01-19
Release date:2022-10-19
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Mechanism of an intramembrane chaperone for multipass membrane proteins.
Nature, 611, 2022
7TUT
DownloadVisualize
BU of 7tut by Molmil
Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon
Descriptor: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Kim, M.K, Lewis, A.J.O, Keenan, R.J, Hegde, R.S.
Deposit date:2022-02-03
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Mechanism of an intramembrane chaperone for multipass membrane proteins.
Nature, 611, 2022
4MYN
DownloadVisualize
BU of 4myn by Molmil
Crystal structure of Trypanosoma cruzi formiminoglutamase N114H variant with Mn2+2
Descriptor: Formiminoglutamase, MANGANESE (II) ION
Authors:Hai, Y, Dugery, R.J, Healy, D, Christianson, D.W.
Deposit date:2013-09-27
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Formiminoglutamase from trypanosoma cruzi is an arginase-like manganese metalloenzyme.
Biochemistry, 52, 2013
4N5A
DownloadVisualize
BU of 4n5a by Molmil
Crystal structure of Efr3
Descriptor: Protein EFR3
Authors:Wu, X, Chi, R.J, Baskin, J.M, Lucast, L, Burd, C.G, De Camilli, P, Reinisch, K.M.
Deposit date:2013-10-09
Release date:2014-01-22
Last modified:2014-03-19
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Structural insights into assembly and regulation of the plasma membrane phosphatidylinositol 4-kinase complex.
Dev.Cell, 28, 2014
4N59
DownloadVisualize
BU of 4n59 by Molmil
The Crystal Structure of Pectocin M2 at 2.3 Angstroms
Descriptor: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, Pectocin M2, ...
Authors:Zeth, K, Grinter, R, Roszak, A.W, Cogdell, R.J, Walker, D.
Deposit date:2013-10-09
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the atypical bacteriocin pectocin M2 implies a novel mechanism of protein uptake.
Mol.Microbiol., 93, 2014
1MLB
DownloadVisualize
BU of 1mlb by Molmil
MONOCLONAL ANTIBODY FAB D44.1 RAISED AGAINST CHICKEN EGG-WHITE LYSOZYME
Descriptor: IGG1-KAPPA D44.1 FAB (HEAVY CHAIN), IGG1-KAPPA D44.1 FAB (LIGHT CHAIN)
Authors:Braden, B.C, Souchon, H, Eisele, J.-L, Bentley, G.A, Bhat, T.N, Navaza, J, Poljak, R.J.
Deposit date:1995-03-08
Release date:1995-06-03
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structures of the free and the antigen-complexed Fab from monoclonal anti-lysozyme antibody D44.1.
J.Mol.Biol., 243, 1994
6EOE
DownloadVisualize
BU of 6eoe by Molmil
Crystal structure of AMPylated GRP78 with nucleotide
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-DIPHOSPHATE, CITRATE ANION, ...
Authors:Yan, Y, Preissler, S, Ron, D, Read, R.J.
Deposit date:2017-10-09
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation.
Elife, 6, 2017
6EOB
DownloadVisualize
BU of 6eob by Molmil
Crystal structure of AMPylated GRP78 in apo form (Crystal form 1)
Descriptor: 78 kDa glucose-regulated protein, PHOSPHATE ION
Authors:Yan, Y, Preissler, S, Ron, D, Read, R.J.
Deposit date:2017-10-09
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:AMPylation targets the rate-limiting step of BiP's ATPase cycle for its functional inactivation.
Elife, 6, 2017
4Q9N
DownloadVisualize
BU of 4q9n by Molmil
Crystal structure of Chlamydia trachomatis enoyl-ACP reductase (FabI) in complex with NADH and AFN-1252
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide
Authors:Yao, J, Abdelrahman, Y, Robertson, R.M, Cox, J.V, Belland, R.J, White, S.W, Rock, C.O.
Deposit date:2014-05-01
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Type II Fatty Acid Synthesis Is Essential for the Replication of Chlamydia trachomatis.
J.Biol.Chem., 289, 2014
6CWR
DownloadVisualize
BU of 6cwr by Molmil
Crystal structure of SpaA-SLH/G46A/G109A in complex with 4,6-Pyr-beta-D-ManNAcOMe
Descriptor: Surface (S-) layer glycoprotein, methyl 2-(acetylamino)-4,6-O-[(1S)-1-carboxyethylidene]-2-deoxy-beta-D-mannopyranoside
Authors:Blackler, R.J, Gagnon, S.M.L, Haji-Ghassemi, O, Evans, S.V.
Deposit date:2018-03-30
Release date:2018-08-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structural basis of cell wall anchoring by SLH domains in Paenibacillus alvei.
Nat Commun, 9, 2018
4N3E
DownloadVisualize
BU of 4n3e by Molmil
Crystal structure of Hyp-1, a St John's wort PR-10 protein, in complex with 8-anilino-1-naphthalene sulfonate (ANS)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-ANILINO-1-NAPHTHALENE SULFONATE, Phenolic oxidative coupling protein, ...
Authors:Sliwiak, J, Dauter, Z, Mccoy, A.J, Read, R.J, Jaskolski, M.
Deposit date:2013-10-07
Release date:2014-02-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Likelihood-based molecular-replacement solution for a highly pathological crystal with tetartohedral twinning and sevenfold translational noncrystallographic symmetry.
Acta Crystallogr.,Sect.D, 70, 2014
6E0E
DownloadVisualize
BU of 6e0e by Molmil
Crystal structure of Glucokinase in complex with compound 6
Descriptor: 2-({2-[(4-methyl-1,3-thiazol-2-yl)amino]pyridin-3-yl}oxy)benzonitrile, Glucokinase, alpha-D-glucopyranose
Authors:Hinklin, R.J, Baer, B.R, Boyd, S.A, Chicarelli, M.D, Condroski, K.R, DeWolf, W.E, Fischer, J, Frank, M, Hingorani, G.P, Lee, P.A, Neitzel, N.A, Pratt, S.A, Singh, A, Sullivan, F.X, Turner, T, Voegtli, W.C, Wallace, E.M, Williams, L, Aicher, T.D.
Deposit date:2018-07-06
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery and preclinical development of AR453588 as an anti-diabetic glucokinase activator.
Bioorg.Med.Chem., 28, 2020
4P48
DownloadVisualize
BU of 4p48 by Molmil
The structure of a chicken anti-cardiac Troponin I scFv
Descriptor: Antibody scFv 180
Authors:Conroy, P.J, Law, R.H.P, Gillgunn, S, Hearty, S, Caradoc-Davies, T.T, Llyod, G, O'Kennedy, R.J, Whisstock, J.C.
Deposit date:2014-03-12
Release date:2014-04-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Reconciling the structural attributes of avian antibodies.
J.Biol.Chem., 289, 2014
4P49
DownloadVisualize
BU of 4p49 by Molmil
The structure of a chicken anti-prostate specific antigen scFv
Descriptor: ACETATE ION, Antibody scFv B8, SULFATE ION
Authors:Conroy, P.J, Law, R.H.P, Gilgunn, S, Hearty, S, Llyod, G, Caradoc-Davies, T.T, O'Kennedy, R.J, Whisstock, J.C.
Deposit date:2014-03-12
Release date:2014-04-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Reconciling the structural attributes of avian antibodies.
J.Biol.Chem., 289, 2014
4PPL
DownloadVisualize
BU of 4ppl by Molmil
Crystal structure of eCGP123 H193Q variant at pH 7.5
Descriptor: Monomeric Azami Green
Authors:Don Paul, C, Traore, D.A.K, Devenish, R.J, Close, D, Bell, T, Bradbury, A, Wilce, M.C.J, Prescott, M.
Deposit date:2014-02-27
Release date:2015-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-Ray Crystal Structure and Properties of Phanta, a Weakly Fluorescent Photochromic GFP-Like Protein.
Plos One, 10, 2015
6F90
DownloadVisualize
BU of 6f90 by Molmil
Structure of the family GH92 alpha-mannosidase BT3130 from Bacteroides thetaiotaomicron in complex with Mannoimidazole (ManI)
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, Alpha-1,2-mannosidase, putative, ...
Authors:Thompson, A.J, Spears, R.J, Zhu, Y, Suits, M.D.L, Williams, S.J, Gilbert, H.J, Davies, G.J.
Deposit date:2017-12-13
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Bacteroides thetaiotaomicron generates diverse alpha-mannosidase activities through subtle evolution of a distal substrate-binding motif.
Acta Crystallogr D Struct Biol, 74, 2018
4PK9
DownloadVisualize
BU of 4pk9 by Molmil
The Crystal Structure of Native Patatin
Descriptor: Patatin-17
Authors:Wijeyesakere, S.J, Stuckey, J.A, Richardson, R.J.
Deposit date:2014-05-14
Release date:2014-10-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal Structure of Patatin-17 in Complex with Aged and Non-Aged Organophosphorus Compounds.
Plos One, 9, 2014
4Q4E
DownloadVisualize
BU of 4q4e by Molmil
Crystal structure of E.coli aminopeptidase N in complex with actinonin
Descriptor: ACTINONIN, Aminopeptidase N, GLYCEROL, ...
Authors:Reddi, R, Ganji, R.J, Addlagatta, A.
Deposit date:2014-04-14
Release date:2015-04-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the inhibition of M1 family aminopeptidases by the natural product actinonin: Crystal structure in complex with E. coli aminopeptidase N.
Protein Sci., 24, 2015
4MYF
DownloadVisualize
BU of 4myf by Molmil
Crystal structure of Trypanosoma cruzi formiminoglutamase(oxidized) with Mn2+2 at pH 6.0
Descriptor: Formiminoglutamase, MANGANESE (II) ION
Authors:Hai, Y, Dugery, R.J, Healy, D, Christianson, D.W.
Deposit date:2013-09-27
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Formiminoglutamase from trypanosoma cruzi is an arginase-like manganese metalloenzyme.
Biochemistry, 52, 2013
4MYK
DownloadVisualize
BU of 4myk by Molmil
Crystal structure of Trypanosoma cruzi formiminoglutamase (oxidized) with Mn2+2 at pH 8.5
Descriptor: Formiminoglutamase, MANGANESE (II) ION
Authors:Hai, Y, Dugery, R.J, Healy, D, Christianson, D.W.
Deposit date:2013-09-27
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.518 Å)
Cite:Formiminoglutamase from trypanosoma cruzi is an arginase-like manganese metalloenzyme.
Biochemistry, 52, 2013

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon