Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27201 results

3WY9
DownloadVisualize
BU of 3wy9 by Molmil
Crystal structure of a complex of the archaeal ribosomal stalk protein aP1 and the GDP-bound archaeal elongation factor aEF1alpha
Descriptor: 50S ribosomal protein L12, Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE
Authors:Ito, K, Honda, T, Suzuki, T, Miyoshi, T, Murakami, R, Yao, M, Uchiumi, T.
Deposit date:2014-08-22
Release date:2014-12-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha.
Nucleic Acids Res., 42, 2014
6K0L
DownloadVisualize
BU of 6k0l by Molmil
The crystal structure of simian CD163 SRCR5
Descriptor: Scavenger receptor cysteine-rich type 1 protein M130
Authors:Ma, H, Li, R, Jiang, L, Qiao, S, Zhang, G.
Deposit date:2019-05-07
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural comparison of CD163 SRCR5 from different species sheds some light on its involvement in porcine reproductive and respiratory syndrome virus-2 infection in vitro.
Vet Res, 52, 2021
1SAU
DownloadVisualize
BU of 1sau by Molmil
The Gamma subunit of the dissimilatory sulfite reductase (DsrC) from Archaeoglobus fulgidus at 1.1 A resolution
Descriptor: sulfite reductase, desulfoviridin-type subunit gamma
Authors:Mander, G.J, Weiss, M.S, Hedderich, R, Kahnt, J, Ermler, U, Warkentin, E.
Deposit date:2004-02-09
Release date:2005-02-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Determination of a novel structure by a combination of long-wavelength sulfur phasing and radiation-damage-induced phasing.
Acta Crystallogr.,Sect.D, 60, 2004
6K73
DownloadVisualize
BU of 6k73 by Molmil
Chaperone-tip adhesin complex is vital for synergistic activation of CFA/I fimbriae biogenesis
Descriptor: CFA/I fimbrial subunit E, Colonization factor antigen I chaperone CfaA, GLYCEROL, ...
Authors:Bao, R, He, L.H.
Deposit date:2019-06-05
Release date:2020-06-10
Last modified:2020-10-14
Method:X-RAY DIFFRACTION (2.7742 Å)
Cite:Chaperone-tip adhesin complex is vital for synergistic activation of CFA/I fimbriae biogenesis.
Plos Pathog., 16, 2020
4L78
DownloadVisualize
BU of 4l78 by Molmil
Xenon Trapping and Statistical Coupling Analysis Uncover Regions Important for Structure and Function of Multidomain Protein StPurL
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Tanwar, A.S, Goyal, V.D, Choudhary, D, Panjikar, S, Anand, R.
Deposit date:2013-06-13
Release date:2013-12-11
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Importance of hydrophobic cavities in allosteric regulation of formylglycinamide synthetase: insight from xenon trapping and statistical coupling analysis
Plos One, 8, 2013
3ZCU
DownloadVisualize
BU of 3zcu by Molmil
Rabbit muscle glycogen phosphorylase b in complex with N-(pyridyl-2- carbonyl)-N-beta-D-glucopyranosyl urea determined at 2.05 A resolution
Descriptor: GLYCOGEN PHOSPHORYLASE, MUSCLE FORM, N-[(pyridin-2-ylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine, ...
Authors:Chrysina, E.D, Nagy, V, Felfoldi, N, Konya, B, Telepo, K, Praly, J.P, Docsa, T, Gergely, P, Alexacou, K.M, Hayes, J.M, Konstantakaki, M, Kardakaris, R, Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G, Somsak, L.
Deposit date:2012-11-21
Release date:2013-12-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Synthesis, Kinetic, Computational and Crystallographic Evaluation of N-Acyl-N-Beta-D- Glucopyranosyl)Ureas, Nanomolar Glucose Analogue Inhibitors of Glycogen Phosphorylase, Potential Antidiabetic Agents
To be Published
7EVA
DownloadVisualize
BU of 7eva by Molmil
Structure of molecular chaperone SycE of Yersinia enterocolitica
Descriptor: YopE regulator
Authors:Kumar, R, Datta, S.
Deposit date:2021-05-21
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.083 Å)
Cite:Structure of molecular chaperone SycE of Yersinia enterocolitica
To Be Published
6K6W
DownloadVisualize
BU of 6k6w by Molmil
Structure of RNase J2 from Staphylococcus epidermidis
Descriptor: MANGANESE (II) ION, Ribonuclease J 2
Authors:Raj, R, Gopal, B.
Deposit date:2019-06-05
Release date:2020-10-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of RNase J1 from Staphylococcus epidermidis
J.Biol.Chem., 2020
3ZLP
DownloadVisualize
BU of 3zlp by Molmil
Crystal structure of Schistosoma mansoni Peroxiredoxin 1 C48P mutant form with four decamers in the asymmetric unit
Descriptor: THIOREDOXIN PEROXIDASE
Authors:Saccoccia, F, Angelucci, F, Ardini, M, Boumis, G, Brunori, M, DiLeandro, L, Ippoliti, R, Miele, A.E, Natoli, G, Scotti, S, Bellelli, A.
Deposit date:2013-02-04
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.515 Å)
Cite:Switching between the Alternative Structures and Functions of a 2-Cys Peroxiredoxin, by Site-Directed Mutagenesis
J.Mol.Biol., 425, 2013
6I7Y
DownloadVisualize
BU of 6i7y by Molmil
Crystal Structure of the first bromodomain of BRD4 in complex with RT56
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, [1-[4-[2-[(4~{S})-6-(4-chlorophenyl)-8-methoxy-1-methyl-4~{H}-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]ethanoylamino]phenyl]piperidin-4-yl]-trimethyl-azanium
Authors:Picaud, S, Traquete, R, Bernardes, G.J.L, Newman, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Filippakopoulos, P, Structural Genomics Consortium (SGC)
Deposit date:2018-11-19
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal Structure of the first bromodomain of BRD4 in complex with RT56
To Be Published
3ZRS
DownloadVisualize
BU of 3zrs by Molmil
X-ray crystal structure of a KirBac potassium channel highlights a mechanism of channel opening at the bundle-crossing gate.
Descriptor: ATP-SENSITIVE INWARD RECTIFIER POTASSIUM CHANNEL 10, CHLORIDE ION, POTASSIUM ION
Authors:Bavro, V.N, De Zorzi, R, Schmidt, M.R, Muniz, J.R.C, Zubcevic, L, Sansom, M.S.P, Venien-Bryan, C, Tucker, S.J.
Deposit date:2011-06-17
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of a Kirbac Potassium Channel with an Open Bundle Crossing Indicates a Mechanism of Channel Gating
Nat.Struct.Mol.Biol., 19, 2012
3ZCP
DownloadVisualize
BU of 3zcp by Molmil
Rabbit muscle glycogen phosphorylase b in complex with N- cyclohexancarbonyl-N-beta-D-glucopyranosyl urea determined at 1.83 A resolution
Descriptor: GLYCOGEN PHOSPHORYLASE, MUSCLE FORM, N-[(cyclohexylcarbonyl)carbamoyl]-beta-D-glucopyranosylamine, ...
Authors:Chrysina, E.D, Nagy, V, Felfoldi, N, Konya, B, Telepo, K, Praly, J.P, Docsa, T, Gergely, P, Alexacou, K.M, Hayes, J.M, Konstantakaki, M, Kardakaris, R, Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G, Somsak, L.
Deposit date:2012-11-21
Release date:2013-12-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Synthesis, Kinetic, Computational and Crystallographic Evaluation of N-Acyl-N-Beta-D- Glucopyranosyl)Ureas, Nanomolar Glucose Analogue Inhibitors of Glycogen Phosphorylase, Potential Antidiabetic Agents
To be Published
3ZGF
DownloadVisualize
BU of 3zgf by Molmil
Crystal structure of the Fucosylgalactoside alpha N- acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with in complex with NPE caged UDP-Gal (P2(1)2(1)2(1) space group)
Descriptor: 1-(2-NITROPHENYL)ETHYL UDP-GALACTOSE, HISTO-BLOOD GROUP ABO SYSTEM TRANSFERASE, MANGANESE (II) ION, ...
Authors:Jorgensen, R, Batot, G.O, Hindsgaul, O, Tanaka, H, Perez, S, Imberty, A, Breton, C, Royant, A, Palcic, M.M.
Deposit date:2012-12-17
Release date:2013-01-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structures of a Human Blood Group Glycosyltransferase in Complex with a Photo-Activatable Udp-Gal Derivative Reveal Two Different Binding Conformations
Acta Crystallogr.,Sect.F, 70, 2014
7EPG
DownloadVisualize
BU of 7epg by Molmil
Crystal structure of E.coli CcdB mutant S12G
Descriptor: CHLORIDE ION, Toxin CcdB
Authors:Manjunath, K, Varadarajan, R.
Deposit date:2021-04-26
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.631 Å)
Cite:Mechanistic insights into global suppressors of protein folding defects.
Plos Genet., 18, 2022
7EPI
DownloadVisualize
BU of 7epi by Molmil
Crystal structure of E.coli CcdB mutant S60E
Descriptor: CHLORIDE ION, Toxin CcdB
Authors:Manjunath, K, Goyal, P, Varadarajan, R.
Deposit date:2021-04-26
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.931 Å)
Cite:Mechanistic insights into global suppressors of protein folding defects.
Plos Genet., 18, 2022
7EPJ
DownloadVisualize
BU of 7epj by Molmil
Crystal structure of E.coli CcdB mutant V46L
Descriptor: CHLORIDE ION, Toxin CcdB
Authors:Manjunath, K, Goyal, P, Varadarajan, R.
Deposit date:2021-04-26
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.354 Å)
Cite:Mechanistic insights into global suppressors of protein folding defects.
Plos Genet., 18, 2022
6IRW
DownloadVisualize
BU of 6irw by Molmil
Crystal structure of the human cap-specific adenosine methyltransferase bound to SAH
Descriptor: Phosphorylated CTD-interacting factor 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6IBP
DownloadVisualize
BU of 6ibp by Molmil
Structure of a psychrophilic CCA-adding enzyme at room temperature in ChipX microfluidic device
Descriptor: CCA-adding enzyme
Authors:de Wijn, R, Hennig, O, Rollet, K, Bluhm, A, Betat, H, Moerl, M, Lorber, B, Sauter, C.
Deposit date:2018-11-30
Release date:2019-05-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.536 Å)
Cite:A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography.
Iucrj, 6, 2019
3WYA
DownloadVisualize
BU of 3wya by Molmil
Crystal structure of GDP-bound EF1alpha from Pyrococcus horikoshii
Descriptor: Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE
Authors:Ito, K, Honda, T, Suzuki, T, Miyoshi, T, Murakami, R, Yao, M, Uchiumi, T.
Deposit date:2014-08-22
Release date:2014-12-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha.
Nucleic Acids Res., 42, 2014
6ICG
DownloadVisualize
BU of 6icg by Molmil
Grb2 SH2 domain in phosphopeptide free form
Descriptor: GLYCEROL, Growth factor receptor-bound protein 2, SULFATE ION
Authors:Hosoe, Y, Numoto, N, Inaba, S, Ogawa, S, Morii, H, Abe, R, Ito, N, Oda, M.
Deposit date:2018-09-06
Release date:2019-07-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural and functional properties of Grb2 SH2 dimer in CD28 binding.
Biophys Physicobio., 16, 2019
3X1J
DownloadVisualize
BU of 3x1j by Molmil
Crystal Structure of Phosphopantetheine adenylyltransferase (PPAT/CoaD) with AcCoA from Pseudomonas aeruginosa
Descriptor: ACETYL COENZYME *A, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Chatterjee, R, Datta, S.
Deposit date:2014-11-19
Release date:2015-11-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.334 Å)
Cite:Transition of phosphopantetheine adenylyltransferase from catalytic to allosteric state is characterized by ternary complex formation in Pseudomonas aeruginosa
Biochim.Biophys.Acta, 1864, 2016
1TYR
DownloadVisualize
BU of 1tyr by Molmil
TRANSTHYRETIN COMPLEX WITH RETINOIC ACID
Descriptor: (9cis)-retinoic acid, TRANSTHYRETIN
Authors:Zanotti, G, D'Acunto, M.R, Malpeli, G, Folli, C, Berni, R.
Deposit date:1995-05-12
Release date:1995-09-15
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the transthyretin--retinoic-acid complex
Eur.J.Biochem., 234, 1995
6I7O
DownloadVisualize
BU of 6i7o by Molmil
The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Tesina, P, Cheng, J, Becker, T, Beckmann, R.
Deposit date:2018-11-16
Release date:2019-01-16
Last modified:2019-03-13
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways.
EMBO J., 38, 2019
6IOK
DownloadVisualize
BU of 6iok by Molmil
Cryo-EM structure of multidrug efflux pump MexAB-OprM (0 degree state)
Descriptor: Multidrug resistance protein MexA, Multidrug resistance protein MexB, Outer membrane protein OprM
Authors:Tsutsumi, K, Yonehara, R, Nakagawa, A, Yamashita, E.
Deposit date:2018-10-30
Release date:2019-04-03
Last modified:2019-04-17
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Structures of the wild-type MexAB-OprM tripartite pump reveal its complex formation and drug efflux mechanism.
Nat Commun, 10, 2019
3ZFF
DownloadVisualize
BU of 3zff by Molmil
Human enterovirus 71 in complex with capsid binding inhibitor WIN51711
Descriptor: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, VP1, VP2, ...
Authors:Plevka, P, Perera, R, Yap, M.L, Cardosa, J, Kuhn, R.J, Rossmann, M.G.
Deposit date:2012-12-11
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of Human Enterovirus 71 in Complex with a Capsid-Binding Inhibitor.
Proc.Natl.Acad.Sci.USA, 110, 2013

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon