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PDB: 27201 results

4BAC
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prototype foamy virus strand transfer complexes on product DNA
Descriptor: 5'-D(*AP*GP*GP*AP*GP*CP*CP*AP*AP*GP*AP*CP*GP*GP *AP*TP*CP)-3', 5'-D(*AP*TP*TP*GP*TP*CP*AP*TP*GP*GP*AP*AP*TP*TP *TP*TP*GP*TP*AP)-3', DNA (38-MER), ...
Authors:Yin, Z, Lapkouski, M, Yang, W, Craigie, R.
Deposit date:2012-09-12
Release date:2012-10-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.263 Å)
Cite:Assembly of Prototype Foamy Virus Strand Transfer Complexes on Product DNA Bypassing Catalysis of Integration.
Protein Sci., 21, 2012
4BDD
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BU of 4bdd by Molmil
Fragment-based screening identifies a new area for inhibitor binding to checkpoint kinase 2 (CHK2)
Descriptor: 1,2-ETHANEDIOL, 1-(TERT-BUTYL)-3-(QUINOXALIN-6-YL)UREA, NITRATE ION, ...
Authors:Silva-Santisteban, M.C, Westwood, I.M, Boxall, K, Brown, N, Peacock, S, McAndrew, C, Barrie, E, Richards, M, Mirza, A, Oliver, A.W, Burke, R, Hoelder, S, Jones, K, Aherne, G.W, Blagg, J, Collins, I, Garrett, M.D, van Montfort, R.L.M.
Deposit date:2012-10-05
Release date:2013-06-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Fragment-Based Screening Maps Inhibitor Interactions in the ATP-Binding Site of Checkpoint Kinase 2.
Plos One, 8, 2013
4AXS
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BU of 4axs by Molmil
Structure of Carbamate Kinase from Mycoplasma penetrans
Descriptor: CARBAMATE KINASE, SULFATE ION
Authors:Gallego, P, Planell, R, Benach, J, Querol, E, PerezPons, J.A, Reverter, D.
Deposit date:2012-06-14
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Characterization of the Enzymes Composing the Arginine Deiminase Pathway in Mycoplasma Penetrans.
Plos One, 7, 2012
4AY7
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BU of 4ay7 by Molmil
methyltransferase from Methanosarcina mazei
Descriptor: MAGNESIUM ION, METHYLCOBALAMIN: COENZYME M METHYLTRANSFERASE, ZINC ION
Authors:Hoeppner, A, Thomas, F, Rueppel, A, Hensel, R, Blankenfeld, W, Bayer, P, Faust, A.
Deposit date:2012-06-18
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Corrinoid:Coenzyme M Methyltransferase Mtaa from Methanosarcina Mazei
Acta Crystallogr.,Sect.D, 68, 2012
4B0G
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BU of 4b0g by Molmil
Complex of Aurora-A bound to an Imidazopyridine-based inhibitor
Descriptor: 6-bromo-2-(1-methyl-1H-imidazol-5-yl)-7-{4-[(5-methyl-1,2-oxazol-3-yl)methyl]piperazin-1-yl}-1H-imidazo[4,5-b]pyridine, AURORA KINASE A, SULFATE ION
Authors:Kosmopoulou, M, Bayliss, R.
Deposit date:2012-07-02
Release date:2013-03-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Optimization of Imidazo[4,5-B]Pyridine-Based Kinase Inhibitors: Identification of a Dual Flt3/Aurora Kinase Inhibitor as an Orally Bioavailable Preclinical Development Candidate for the Treatment of Acute Myeloid Leukemia.
J.Med.Chem., 55, 2012
4BG4
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BU of 4bg4 by Molmil
Crystal structure of Litopenaeus vannamei arginine kinase in a ternary analog complex with arginine, ADP-Mg and NO3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARGININE, ARGININE KINASE, ...
Authors:Lopez-Zavala, A.A, Garcia-Orozco, K.D, Carrasco-Miranda, J.S, Sugich-Miranda, R, Velazquez-Contreras, E.F, Criscitiello, M.F, GBrieba, L, Rudino-Pinera, E, Sotelo-Mundo, R.R.
Deposit date:2013-03-22
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Crystal Structure of Shrimp Arginine Kinase in Binary Complex with Arginine-A Molecular View of the Phosphagen Precursor Binding to the Enzyme.
J.Bioenerg.Biomembr., 45, 2013
6JKM
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BU of 6jkm by Molmil
Crystal structure of BubR1 kinase domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Lin, L, Ye, S, Huang, Y, Liu, X, Zhang, R, Yao, X.
Deposit date:2019-03-01
Release date:2019-06-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:BubR1 phosphorylates CENP-E as a switch enabling the transition from lateral association to end-on capture of spindle microtubules.
Cell Res., 29, 2019
4B9E
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BU of 4b9e by Molmil
Structure of a putative epoxide hydrolase from Pseudomonas aeruginosa, with bound MFA.
Descriptor: GLYCEROL, PROBABLE EPOXIDE HYDROLASE, SULFATE ION, ...
Authors:Schmidberger, J.W, Schnell, R, Schneider, G.
Deposit date:2012-09-04
Release date:2013-02-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Aeropath Project Targeting Pseudomonas Aeruginosa: Crystallographic Studies for Assessment of Potential Targets in Early-Stage Drug Discovery.
Acta Crystallogr.,Sect.F, 69, 2013
4BEB
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BU of 4beb by Molmil
MUTANT (K220E) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, TYPE I RESTRICTION ENZYME HSDR
Authors:Csefalvay, E, Lapkouski, M, Guzanova, A, Csefalvay, L, Baikova, T, Shevelev, I, Janscak, P, Smatanova, I.K, Panjikar, S, Carey, J, Weiserova, M, Ettrich, R.
Deposit date:2013-03-07
Release date:2014-03-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.989 Å)
Cite:Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
Plos One, 10, 2015
4B3U
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BU of 4b3u by Molmil
Pseudomonas aeruginosa RmlA in complex with allosteric inhibitor
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-amino-1-benzyl-5-(ethylamino)pyrimidine-2,4(1H,3H)-dione, CHLORIDE ION, ...
Authors:Alphey, M.S, Pirrie, L, Torrie, L.S, Gardiner, M, Sarkar, A, Brenk, R, Westwood, N.J, Gray, D, Naismith, J.H.
Deposit date:2012-07-26
Release date:2012-10-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Allosteric competitive inhibitors of the glucose-1-phosphate thymidylyltransferase (RmlA) from Pseudomonas aeruginosa.
ACS Chem. Biol., 8, 2013
4B4D
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BU of 4b4d by Molmil
Crystal structure of FAD-containing ferredoxin-NADP reductase from Xanthomonas axonopodis pv. citri
Descriptor: CHLORIDE ION, FERREDOXIN-NADP REDUCTASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Martinez-Julvez, M, Orellano, E.G, Tondo, M.L, Hurtado-Guerrero, R, Medina, M, Ceccarelli, E.A, Sanchez-Azqueta, A.
Deposit date:2012-07-30
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Fad-Containing Ferredoxin- Nadp Reductase from Xanthomonas Axonopodis Pv. Citri
Biomed Res Int, 2013, 2013
4B5C
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BU of 4b5c by Molmil
Crystal structure of the peptidoglycan-associated lipoprotein from Burkholderia pseudomallei
Descriptor: ACETATE ION, PUTATIVE OMPA FAMILY LIPOPROTEIN
Authors:Gourlay, L.J, Peri, C, Conchillo-Sole, O, Ferrer-Navarro, M, Gori, A, Longhi, R, Rinchai, D, Lertmemongkolchai, G, Lassaux, P, Daura, X, Colombo, G, Bolognesi, M.
Deposit date:2012-08-03
Release date:2013-08-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Exploiting the Burkholderia Pseudomallei Acute Phase Antigen Bpsl2765 for Structure-Based Epitope Discovery/Design in Structural Vaccinology.
Chem.Biool., 20, 2013
6JEC
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BU of 6jec by Molmil
Structure of a triple-helix region of human collagen type II
Descriptor: human collagen type II
Authors:Yang, X, Zhu, Y, Ye, S, Zhang, R.
Deposit date:2019-02-05
Release date:2020-02-05
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Structure of a triple-helix region of human collagen type II.
To Be Published
3ZFO
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BU of 3zfo by Molmil
Crystal structure of substrate-like, unprocessed N-terminal protease Npro mutant S169P
Descriptor: CHLORIDE ION, HYDROXIDE ION, MONOTHIOGLYCEROL, ...
Authors:Zogg, T, Sponring, M, Schindler, S, Koll, M, Schneider, R, Brandstetter, H, Auer, B.
Deposit date:2012-12-12
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structures of the Viral Protease Npro Imply Distinct Roles for the Catalytic Water in Catalysis
Structure, 21, 2013
6JKL
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BU of 6jkl by Molmil
Structure of a triple-helix region of human collagen type II
Descriptor: A triple-helix region of human collagen type II
Authors:Yang, X, Zhu, Y, Ye, S, Zhang, R.
Deposit date:2019-03-01
Release date:2020-03-04
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Structure of a triple-helix region of human collagen type II.
To Be Published
6JKQ
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BU of 6jkq by Molmil
Crystal structure of aspartate transcarbamoylase from Trypanosoma cruzi (Ligand-free form)
Descriptor: Aspartate carbamoyltransferase
Authors:Matoba, K, Shiba, T, Nara, T, Aoki, T, Nagasaki, S, Hayamizu, R, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Balogun, E.O, Inaoka, D.K, Kita, K, Harada, S.
Deposit date:2019-03-01
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystallographic snapshots of Trypanosoma cruzi aspartate transcarbamoylase revealed an ordered Bi-Bi reaction mechanism
To Be Published
3ZN1
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BU of 3zn1 by Molmil
LSD1-CoREST in complex with PRLYLV peptide
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, PEPTIDE, ...
Authors:Tortorici, M, Borrello, M.T, Tardugno, M, Chiarelli, L.R, Pilotto, S, Ciossani, G, Vellore, N.A, Cowan, J, O'Connell, M, Mai, A, Baron, R, Ganesan, A, Mattevi, A.
Deposit date:2013-02-13
Release date:2013-06-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Protein Recognition by Small Peptide Reversible Inhibitors of the Chromatin-Modifying Lsd1/Corest Lysine Demethylase.
Acs Chem.Biol., 8, 2013
3ZCD
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BU of 3zcd by Molmil
Native structure of Farnesyl Pyrophosphate Synthase from Pseudomonas aeruginosa PA01.
Descriptor: GERANYLTRANSTRANSFERASE
Authors:Schmidberger, J.W, Schnell, R, Schneider, G.
Deposit date:2012-11-19
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Characterization of Substrate and Inhibitor Binding to Farnesyl Pyrophosphate Synthase from Pseudomonas Aeruginosa.
Acta Crystallogr.,Sect.D, 71, 2015
6JL6
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BU of 6jl6 by Molmil
Crystal structure of aspartate transcarbamoylase from Trypanosoma cruzi in complex with phosphate (Pi).
Descriptor: ASPARTIC ACID, Aspartate carbamoyltransferase, PHOSPHATE ION
Authors:Matoba, K, Shiba, T, Nara, T, Aoki, T, Nagasaki, S, Hayamizu, R, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Balogun, E.O, Inaoka, D.K, Kita, K, Harada, S.
Deposit date:2019-03-04
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic snapshots of Trypanosoma cruzi aspartate transcarbamoylase revealed an ordered Bi-Bi reaction mechanism
To Be Published
6JOO
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BU of 6joo by Molmil
Crystal structure of Corynebacterium diphtheriae Cas9 in complex with sgRNA and target DNA
Descriptor: 1,2-ETHANEDIOL, CRISPR-associated protein,CRISPR-associated endonuclease Cas9, Guide RNA, ...
Authors:Hirano, S, Ishitani, R, Nishimasu, H, Nureki, O.
Deposit date:2019-03-22
Release date:2019-04-17
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the promiscuous PAM recognition by Corynebacterium diphtheriae Cas9.
Nat Commun, 10, 2019
1UWP
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BU of 1uwp by Molmil
Initial Events in the Photocycle of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN, SULFATE ION
Authors:Kort, R, Hellingwerf, K.J, Ravelli, R.B.G.
Deposit date:2004-02-11
Release date:2006-05-10
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Initial events in the photocycle of photoactive yellow protein.
J. Biol. Chem., 279, 2004
3ZL5
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BU of 3zl5 by Molmil
Crystal structure of Schistosoma mansoni Peroxiredoxin I C48S mutant with one decamer in the ASU
Descriptor: DI(HYDROXYETHYL)ETHER, PEROXIREDOXIN I, SULFATE ION
Authors:Saccoccia, F, Angelucci, F, Ardini, M, Boumis, G, Brunori, M, DiLeandro, L, Ippoliti, R, Miele, A.E, Natoli, G, Scotti, S, Bellelli, A.
Deposit date:2013-01-28
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Switching between the Alternative Structures and Functions of a 2-Cys Peroxiredoxin, by Site-Directed Mutagenesis
J.Mol.Biol., 425, 2013
4MIJ
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BU of 4mij by Molmil
Crystal structure of a Trap periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_3107), target EFI-510173, with bound alpha/beta D-Galacturonate, space group P21
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, TRAP dicarboxylate transporter, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Zhao, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-08-31
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
6K0P
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BU of 6k0p by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase D1045A in complex with nigerose
Descriptor: ACETIC ACID, Alpha-1,3-glucanase, CALCIUM ION, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.424 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
6K0N
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BU of 6k0n by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase in complex with nigerose
Descriptor: ACETIC ACID, Alpha-1,3-glucanase, CALCIUM ION, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020

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數據於2024-07-17公開中

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