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PDB: 27201 results

7ZEG
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BU of 7zeg by Molmil
Human cytosolic 5' nucleotidase IIIB in complex with 3,4-diF-Bn7GMP
Descriptor: 1,2-ETHANEDIOL, 7-methylguanosine phosphate-specific 5'-nucleotidase, MAGNESIUM ION, ...
Authors:Kubacka, D, Kozarski, M, Baranowski, M.R, Wojcik, R, Jemielity, J, Kowalska, J, Basquin, J.
Deposit date:2022-03-31
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Substrate-Based Design of Cytosolic Nucleotidase IIIB Inhibitors and Structural Insights into Inhibition Mechanism.
Pharmaceuticals, 15, 2022
7ZEE
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Human cytosolic 5' nucleotidase IIIB
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 7-methylguanosine phosphate-specific 5'-nucleotidase, ...
Authors:Kubacka, D, Kozarski, M, Baranowski, M.R, Wojcik, R, Jemielity, J, Kowalska, J, Basquin, J.
Deposit date:2022-03-31
Release date:2022-04-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Substrate-Based Design of Cytosolic Nucleotidase IIIB Inhibitors and Structural Insights into Inhibition Mechanism.
Pharmaceuticals, 15, 2022
2PTN
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BU of 2ptn by Molmil
ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY
Descriptor: CALCIUM ION, TRYPSIN
Authors:Walter, J, Steigemann, W, Singh, T.P, Bartunik, H, Bode, W, Huber, R.
Deposit date:1981-10-26
Release date:1982-03-04
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:On the Disordered Activation Domain in Trypsinogen. Chemical Labelling and Low-Temperature Crystallography
Acta Crystallogr.,Sect.B, 38, 1982
1DK0
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BU of 1dk0 by Molmil
CRYSTAL STRUCTURE OF THE HEMOPHORE HASA FROM SERRATIA MARCESCENS CRYSTAL FORM P2(1), PH8
Descriptor: HEME-BINDING PROTEIN A, PROTOPORPHYRIN IX CONTAINING FE
Authors:Arnoux, P, Haser, R, Izadi-Pruneyre, N, Lecroisey, A, Czjzek, M.
Deposit date:1999-12-06
Release date:2000-12-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Functional aspects of the heme bound hemophore HasA by structural analysis of various crystal forms.
Proteins, 41, 2000
2Y5T
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Crystal structure of the pathogenic autoantibody CIIC1 in complex with the triple-helical C1 peptide
Descriptor: C1, CHLORIDE ION, CIIC1 FAB FRAGMENT HEAVY CHAIN, ...
Authors:Dobritzsch, D, Lindh, I, Schneider, N, Uysal, H, Nandakumar, K.S, Burkhardt, H, Schneider, G, Holmdahl, R.
Deposit date:2011-01-17
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of an Arthritogenic Anticollagen Immune Complex.
Arthritis Rheum., 63, 2011
2XRY
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BU of 2xry by Molmil
X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei
Descriptor: DEOXYRIBODIPYRIMIDINE PHOTOLYASE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O.
Deposit date:2010-09-24
Release date:2011-09-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA.
Embo J., 30, 2011
2LNA
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BU of 2lna by Molmil
Solution NMR Structure of the mitochondrial inner membrane domain (residues 164-251), FtsH_ext, from the paraplegin-like protein AFG3L2 from Homo sapiens, Northeast Structural Genomics Consortium Target HR6741A
Descriptor: AFG3-like protein 2
Authors:Ramelot, T.A, Yang, Y, Lee, H, Janua, H, Kohan, E, Shastry, R, Acton, T.B, Xiao, R, Everett, J.K, Prestegard, J.H, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG), Mitochondrial Protein Partnership (MPP)
Deposit date:2011-12-20
Release date:2012-01-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure and MD simulations of the AAA protease intermembrane space domain indicates peripheral membrane localization within the hexaoligomer.
Febs Lett., 587, 2013
7Z0P
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BU of 7z0p by Molmil
SARS-COV2 Main Protease in complex with inhibitor MG-131
Descriptor: (1~{R},2~{S},5~{S})-3-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-~{N}-[(2~{S},3~{R})-4-(methylamino)-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5, SODIUM ION
Authors:El Kilani, H, Hilgenfeld, R.
Deposit date:2022-02-23
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease.
Molecules, 27, 2022
2XRZ
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BU of 2xrz by Molmil
X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei in complex with intact CPD-lesion
Descriptor: ACETATE ION, COUNTERSTRAND-OLIGONUCLEOTIDE, CPD-COMPRISING OLIGONUCLEOTIDE, ...
Authors:Kiontke, S, Geisselbrecht, Y, Pokorny, R, Carell, T, Batschauer, A, Essen, L.O.
Deposit date:2010-09-24
Release date:2011-09-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of an Archaeal Class II DNA Photolyase and its Complex with Uv-Damaged Duplex DNA.
Embo J., 30, 2011
2XTB
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BU of 2xtb by Molmil
Crystal Structure of Trypanosoma brucei rhodesiense Adenosine Kinase Complexed with Activator
Descriptor: 4-[5-(4-PHENOXYPHENYL)-1H-PYRAZOL-3-YL]MORPHOLINE, ADENOSINE KINASE
Authors:Kuettel, S, Greenwald, J, Kostrewa, D, Ahmed, S, Scapozza, L, Perozzo, R.
Deposit date:2010-10-05
Release date:2011-06-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structures of T. B. Rhodesiense Adenosine Kinase Complexed with Inhibitor and Activator: Implications for Catalysis and Hyperactivation.
Plos Negl Trop Dis, 5, 2011
7ZEH
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BU of 7zeh by Molmil
Human cytosolic 5' nucleotidase IIIB in complex with 3,4-diF-Bn7Guanine
Descriptor: 1,2-ETHANEDIOL, 7-methylguanosine phosphate-specific 5'-nucleotidase, D-ribulose, ...
Authors:Kubacka, D, Kozarski, M, Baranowski, M.R, Wojcik, R, Jemielity, J, Kowalska, J, Basquin, J.
Deposit date:2022-03-31
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Substrate-Based Design of Cytosolic Nucleotidase IIIB Inhibitors and Structural Insights into Inhibition Mechanism.
Pharmaceuticals, 15, 2022
3FGT
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BU of 3fgt by Molmil
Two chain form of the 66.3 kDa protein from mouse lacking the linker peptide
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lakomek, K, Dickmanns, A, Ficner, R.
Deposit date:2008-12-08
Release date:2009-09-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Initial insight into the function of the lysosomal 66.3 kDa protein from mouse by means of X-ray crystallography
Bmc Struct.Biol., 9, 2009
7ZCV
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BU of 7zcv by Molmil
Rgg144 of Streptococcus pneumoniae
Descriptor: Transcriptional regulator
Authors:Wallis, R, Girija, U.V, Yesilkaya, H.
Deposit date:2022-03-29
Release date:2022-06-01
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-function analysis for the development of peptide inhibitors for a Gram-positive quorum sensing system.
Mol.Microbiol., 117, 2022
2Y3M
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BU of 2y3m by Molmil
Structure of the extra-membranous domain of the secretin HofQ from Actinobacillus actinomycetemcomitans
Descriptor: FORMIC ACID, GLYCEROL, PROTEIN TRANSPORT PROTEIN HOFQ
Authors:Tarry, M, Jaaskelainen, M, Tuominen, H, Ihalin, R, Hogbom, M.
Deposit date:2010-12-21
Release date:2011-04-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Extra-Membranous Domains of the Competence Protein Hofq Show DNA Binding, Flexibility and a Shared Fold with Type I Kh Domains.
J.Mol.Biol., 409, 2011
2XDI
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BU of 2xdi by Molmil
Tryptophan repressor with L75F mutation in its apo form (no L- tryptophan bound)
Descriptor: TRP OPERON REPRESSOR
Authors:Tyler, R, Copie, V.
Deposit date:2010-05-03
Release date:2010-07-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Three-Dimensional Solution NMR Structure of Apo-L75F-Trpr, a Temperature-Sensitive Mutant of the Tryptophan Repressor Protein.
Biochemistry, 41, 2002
7YZN
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BU of 7yzn by Molmil
Structure of C-terminally truncated aIF5B from Pyrococcus abyssi complexed with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable translation initiation factor IF-2, ...
Authors:Bourgeois, G, Schmitt, E, Mechulam, Y, Coureux, P.D, Kazan, R.
Deposit date:2022-02-21
Release date:2022-06-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
7YYP
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BU of 7yyp by Molmil
Structure of aIF5B from Pyrococcus abyssi complexed with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, NITRATE ION, Probable translation initiation factor IF-2
Authors:Bourgeois, G, Schmitt, E, Mechulam, Y, Coureux, P.D, Kazan, R.
Deposit date:2022-02-18
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
2YOL
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BU of 2yol by Molmil
West Nile Virus NS2B-NS3 protease in complex with 3,4- dichlorophenylacetyl-Lys-Lys-GCMA
Descriptor: (S)-6-amino-N-((S)-6-amino-1-(((1r,4S)-4-guanidinocyclohexyl)methylamino)-1-oxohexan-2-yl)-2-(2-(3,4-dichlorophenyl)acetamido)hexanamide, CHLORIDE ION, NICKEL (II) ION, ...
Authors:Hammamy, M.Z, Haase, C, Hammami, M, Hilgenfeld, R, Steinmetzer, T.
Deposit date:2012-10-25
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Development and Characterization of New Peptidomimetic Inhibitors of the West Nile Virus Ns2B-Ns3 Protease.
Chemmedchem, 8, 2013
2Y8B
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BU of 2y8b by Molmil
VIM-7 with Oxidised. Structural and computational investigations of VIM-7: Insights into the substrate specificity of VIM metallo-beta- lactamases
Descriptor: METALLO-B-LACTAMASE, ZINC ION
Authors:Saradhi, P, Leiros, H.-K.S, Ahmad, R, Spencer, J, Leiros, I, Walsh, T.R, Sundsfjord, A, Samuelsen, O.
Deposit date:2011-02-03
Release date:2011-06-15
Last modified:2011-08-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Computational Investigations of Vim- 7: Insights Into the Substrate Specificity of Vim Metallo-Beta-Lactamases
J.Mol.Biol., 411, 2011
2YLR
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BU of 2ylr by Molmil
SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: COMPLEX WITH NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHENYLACETONE MONOOXYGENASE
Authors:Orru, R, Dudek, H.M, Martinoli, C, Torres Pazmino, D.E, Royant, A, Weik, M, Fraaije, M.W, Mattevi, A.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization.
J.Biol.Chem., 286, 2011
2YHH
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BU of 2yhh by Molmil
Microvirin:mannobiose complex
Descriptor: MANNAN-BINDING LECTIN, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Hussan, S, Bewley, C.A, Clore, G.M, Gustchina, E, Ghirlando, R.
Deposit date:2011-05-02
Release date:2011-06-15
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Solution Structure of the Monovalent Lectin Microvirin in Complex with Man(Alpha)(1-2)Man Provides a Basis for Anti-HIV Activity with Low Toxicity.
J.Biol.Chem., 286, 2011
2YQG
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BU of 2yqg by Molmil
Solution structure of the first cadherin domain from human Desmoglein-2
Descriptor: Desmoglein-2
Authors:Sano, R, Hayashi, F, Yoshida, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the first cadherin domain from human Desmoglein-2
To be Published
1DXH
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BU of 1dxh by Molmil
Catabolic ornithine carbamoyltransferase from Pseudomonas aeruginosa
Descriptor: ORNITHINE CARBAMOYLTRANSFERASE, SULFATE ION
Authors:Sainz, G, Vicat, J, Kahn, R, Duee, E, Tricot, C, Stalon, V, Dideberg, O.
Deposit date:2000-01-05
Release date:2001-01-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Allosteric Active Form of Catabolic Ornithine Carbamoyltransferase from Pseudomonas Aeruginosa
To be Published
2YLT
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BU of 2ylt by Molmil
SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: COMPLEX WITH NADP and MES
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Orru, R, Dudek, H.M, Martinoli, C, Torres Pazmino, D.E, Royant, A, Weik, M, Fraaije, M.W, Mattevi, A.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization.
J.Biol.Chem., 286, 2011
2Y67
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New 5-Benzylidenethiazolidine-4-one Inhibitors of Bacterial MurD Ligase: Design, Synthesis, Crystal Structures, and Biological Evaluation
Descriptor: (2R)-2-[[4-[[4-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]phenoxy]methyl]phenyl]sulfonylamino]pentanedioic acid, SULFATE ION, UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
Authors:Zidar, N, Tomasic, T, Sink, R, Kovac, A, Patin, D, Blanot, D, Contreras-Martel, C, Dessen, A, Muller-Premru, M, Zega, A, Gobec, S, Peterlin-Masic, L, Kikelj, D.
Deposit date:2011-01-20
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:New 5-Benzylidenethiazolidin-4-One Inhibitors of Bacterial Murd Ligase: Design, Synthesis, Crystal Structures, and Biological Evaluation.
Eur.J.Med.Chem, 46, 2011

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數據於2024-07-17公開中

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