Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27201 results

5DSO
DownloadVisualize
BU of 5dso by Molmil
Structure of CO2 bound apo-form of human carbonic anhydrase II with 0 sec (no) warming
Descriptor: CARBON DIOXIDE, Carbonic anhydrase 2, GLYCEROL
Authors:Kim, C.U, Park, S.Y, McKenna, R.
Deposit date:2015-09-17
Release date:2016-05-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Tracking solvent and protein movement during CO2 release in carbonic anhydrase II crystals
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5DYL
DownloadVisualize
BU of 5dyl by Molmil
Crystal structure of the cGMP-dependent protein kinase PKG from Plasmodium Vivax - Apo form
Descriptor: cGMP-dependent protein kinase, putative
Authors:Wernimont, A.K, Tempel, W, He, H, Seitova, A, Hills, T, Neculai, A.M, Baker, D.A, Flueck, C, Kettleborough, C.A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Hutchinson, A, El Bakkouri, M, Structural Genomics Consortium (SGC)
Deposit date:2015-09-24
Release date:2015-11-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of the cGMP-dependent protein kinase in malaria parasites reveal a unique structural relay mechanism for activation.
Proc.Natl.Acad.Sci.USA, 116, 2019
6UES
DownloadVisualize
BU of 6ues by Molmil
Apo SAM-IV Riboswitch
Descriptor: RNA (119-MER)
Authors:Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
Deposit date:2019-09-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution.
Nat Commun, 10, 2019
5HI6
DownloadVisualize
BU of 5hi6 by Molmil
The high resolution structure of dihydrofolate reductase from Yersinia pestis complex with methotrexate as closed form
Descriptor: CALCIUM ION, CHLORIDE ION, Dihydrofolate reductase, ...
Authors:Chang, C, Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-11
Release date:2016-02-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:The high resolution structure of dihydrofolate reductase from Yersinia pestis complex with methotrexate as closed form
To Be Published
6UFK
DownloadVisualize
BU of 6ufk by Molmil
Pistol ribozyme product crystal soaked in Mn2+
Descriptor: MANGANESE (II) ION, RNA (5'-R(*UP*CP*CP*AP*G)-3'), RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3'), ...
Authors:Teplova, M, Falschlunger, C, Krasheninina, O, Patel, D.J, Micura, R.
Deposit date:2019-09-24
Release date:2019-12-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crucial Roles of Two Hydrated Mg2+Ions in Reaction Catalysis of the Pistol Ribozyme.
Angew.Chem.Int.Ed.Engl., 59, 2020
5H5H
DownloadVisualize
BU of 5h5h by Molmil
Staphylococcus aureus FtsZ-GDP R29A mutant in T state
Descriptor: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Fujita, J, Harada, R, Maeda, Y, Saito, Y, Mizohata, E, Inoue, T, Shigeta, Y, Matsumura, H.
Deposit date:2016-11-05
Release date:2017-05-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification of the key interactions in structural transition pathway of FtsZ from Staphylococcus aureus
J. Struct. Biol., 198, 2017
6UET
DownloadVisualize
BU of 6uet by Molmil
SAM-bound SAM-IV riboswitch
Descriptor: RNA (119-MER), S-ADENOSYLMETHIONINE
Authors:Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
Deposit date:2019-09-23
Release date:2019-12-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution.
Nat Commun, 10, 2019
5HBA
DownloadVisualize
BU of 5hba by Molmil
Globular Domain of Zebrafish Complement 1qA protein
Descriptor: SULFATE ION, Uncharacterized protein
Authors:Xia, C, Yuan, H, Chen, R.
Deposit date:2015-12-31
Release date:2016-07-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of zebrafish complement 1qA globular domain.
Protein Sci., 25, 2016
5H6M
DownloadVisualize
BU of 5h6m by Molmil
DNA targeting ADP-ribosyltransferase Pierisin-1
Descriptor: 1,2-ETHANEDIOL, Pierisin-1
Authors:Oda, T, Hirabayashi, H, Shikauchi, G, Takamura, R, Hiraga, K, Minami, H, Hashimoto, H, Yamamoto, M, Wakabayashi, K, Sugimura, T, Shimizu, T, Sato, M.
Deposit date:2016-11-14
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of autoinhibition and activation of the DNA-targeting ADP-ribosyltransferase pierisin-1
J. Biol. Chem., 292, 2017
5H6Z
DownloadVisualize
BU of 5h6z by Molmil
Crystal structure of Set7, a novel histone methyltransferase in Schizossacharomyces pombe
Descriptor: AMMONIUM ION, DI(HYDROXYETHYL)ETHER, SET domain-containing protein 7, ...
Authors:Mevius, D.E.H.F, Shen, Y, Morishita, M, Carrozzini, B, Caliandro, R, di Luccio, E.
Deposit date:2016-11-15
Release date:2017-11-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Set7 Is a H3K37 Methyltransferase in Schizosaccharomyces pombe and Is Required for Proper Gametogenesis.
Structure, 27, 2019
5HCH
DownloadVisualize
BU of 5hch by Molmil
X-ray structure of a lectin-bound DNA duplex containing an unnatural phenanthrenyl pair
Descriptor: (6S)-2,6-anhydro-1-deoxy-6-(2-{[(S)-hydroxy(oxido)-lambda~5~-phosphanyl]oxy}ethyl)-D-galactitol, CALCIUM ION, DNA (5'-D(*CP*GP*CP*AP*TP*TP*(DF)P*TP*AP*TP*CP*GP*C)-3'), ...
Authors:Roethlisberger, P, Istrate, A, Marcaida Lopez, M.J, Visini, R, Stocker, A, Leumann, C.J.
Deposit date:2016-01-04
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray structure of a lectin-bound DNA duplex containing an unnatural phenanthrenyl pair.
Chem.Commun.(Camb.), 52, 2016
6UGO
DownloadVisualize
BU of 6ugo by Molmil
Human Carbonic Anhydrase IX-mimic complexed with SB4-205
Descriptor: 5,7-dimethyl-1lambda~6~,2,4-benzothiadiazine-1,1,3(2H,4H)-trione, CITRIC ACID, Carbonic anhydrase IX-mimic, ...
Authors:Murray, A.B, McKenna, R, Lomelino, C.L.
Deposit date:2019-09-26
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.457 Å)
Cite:"A Sweet Combination": Developing Saccharin and Acesulfame K Structures for Selectively Targeting the Tumor-Associated Carbonic Anhydrases IX and XII.
J.Med.Chem., 63, 2020
5HFF
DownloadVisualize
BU of 5hff by Molmil
The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant) in complex with a mutant C-terminal peptide derived from CRIPT (T-2F)
Descriptor: Cysteine-rich PDZ-binding protein, Disks large homolog 4, GLYCEROL
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
6UGP
DownloadVisualize
BU of 6ugp by Molmil
Human Carbonic Anhydrase 2 complexed with SB4-206
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-chloro-1lambda~6~,2,4-benzothiadiazine-1,1,3(2H,4H)-trione, Carbonic anhydrase 2, ...
Authors:Murray, A.B, Lomelino, C.L, McKenna, R.
Deposit date:2019-09-26
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.306 Å)
Cite:"A Sweet Combination": Developing Saccharin and Acesulfame K Structures for Selectively Targeting the Tumor-Associated Carbonic Anhydrases IX and XII.
J.Med.Chem., 63, 2020
5HD6
DownloadVisualize
BU of 5hd6 by Molmil
High resolution structure of 3-hydroxydecanoyl-(acyl carrier protein) dehydratase from Yersinia pestis at 1.35 A
Descriptor: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, GLYCEROL
Authors:Chang, C, Maltseva, N, Kim, Y, Mulligan, R, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-01-04
Release date:2016-01-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High resolution structure of 3-hydroxydecanoyl-(acyl carrier protein) dehydratase from Yersinia pestis at 1.35 A
To Be Published
6ULF
DownloadVisualize
BU of 6ulf by Molmil
Crystal structure of 4498 Fab in complex with circumsporozoite protein NDN3 and anti-Kappa VHH domain
Descriptor: 4498 Fab heavy chain, 4498 Fab light chain, Circumsporozoite protein, ...
Authors:Thai, E, Scally, S.W, Prieto, K, Murugan, R, Wardemann, H, Julien, J.P.
Deposit date:2019-10-07
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evolution of protective human antibodies against Plasmodium falciparum circumsporozoite protein repeat motifs.
Nat. Med., 26, 2020
6UI5
DownloadVisualize
BU of 6ui5 by Molmil
Tmn9 in complex with cofactor FAD
Descriptor: 2-polyprenyl-6-methoxyphenol hydroxylase-like FAD-dependent oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Paiva, F.C.R, Little, R, Leadlay, P, Dias, M.V.B.
Deposit date:2019-09-30
Release date:2020-10-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tmn9 in complex with cofactor FAD
To Be Published
5HEN
DownloadVisualize
BU of 5hen by Molmil
Crystal structure of the N-terminus R100L bromodomain mutant of human BRD2
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2
Authors:Tallant, C, Lori, C, Pasquo, A, Chiaraluce, R, Consalvi, V, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S.
Deposit date:2016-01-06
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of the N-terminus R100L bromodomain mutant of human BRD2
To Be Published
6UI9
DownloadVisualize
BU of 6ui9 by Molmil
Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate
Descriptor: ACETYL COENZYME *A, ACLY, OXALOACETATE ION
Authors:Wei, X, Marmorstein, R.
Deposit date:2019-09-30
Release date:2019-12-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular basis for acetyl-CoA production by ATP-citrate lyase
Nat.Struct.Mol.Biol., 27, 2020
5HEU
DownloadVisualize
BU of 5heu by Molmil
Pentameric ligand-gated ion channel ELIC mutant A257Y
Descriptor: Gamma-aminobutyric-acid receptor subunit beta-1
Authors:Bertozzi, C, Dutzler, R.
Deposit date:2016-01-06
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Signal Transduction at the Domain Interface of Prokaryotic Pentameric Ligand-Gated Ion Channels.
Plos Biol., 14, 2016
5HBQ
DownloadVisualize
BU of 5hbq by Molmil
C63D mutant of the rhodanese domain of YgaP
Descriptor: CHLORIDE ION, Inner membrane protein YgaP, SODIUM ION
Authors:Eichmann, C, Tzitzilonis, C, Nakamura, T, Kwiatkowski, W, Maslennikov, I, Choe, S, Lipton, S.A, Riek, R.
Deposit date:2016-01-02
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:S-Nitrosylation Induces Structural and Dynamical Changes in a Rhodanese Family Protein.
J.Mol.Biol., 428, 2016
5HEH
DownloadVisualize
BU of 5heh by Molmil
Pentameric ligand-gated ion channel GLIC mutant P246A
Descriptor: Proton-gated ion channel
Authors:Bertozzi, C, Dutzler, R.
Deposit date:2016-01-06
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Signal Transduction at the Domain Interface of Prokaryotic Pentameric Ligand-Gated Ion Channels.
Plos Biol., 14, 2016
5HF1
DownloadVisualize
BU of 5hf1 by Molmil
The third PDZ domain from the synaptic protein PSD-95 (G330T mutant) in complex with a mutant C-terminal peptide derived from CRIPT (T-2F)
Descriptor: Cysteine-rich PDZ-binding protein, Disks large homolog 4
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Origins of Allostery and Evolvability in Proteins: A Case Study.
Cell(Cambridge,Mass.), 166, 2016
5HFE
DownloadVisualize
BU of 5hfe by Molmil
The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant) in complex with a C-terminal peptide derived from CRIPT
Descriptor: Cysteine-rich PDZ-binding protein, Disks large homolog 4
Authors:White, K.I, Raman, A.S, Ranganathan, R.
Deposit date:2016-01-06
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant) in complex with a C-terminal peptide derived from CRIPT
To Be Published
5FEW
DownloadVisualize
BU of 5few by Molmil
HydE from T. maritima in complex with S-adenosyl-L-cysteine (final product)
Descriptor: (2R,4R)-2-methyl-1,3-thiazolidine-2,4-dicarboxylic acid, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, ...
Authors:Rohac, R, Amara, P, Benjdia, A, Martin, L, Ruffie, P, Favier, A, Berteau, O, Mouesca, J.M, Fontecilla-Camps, J.C, Nicolet, Y.
Deposit date:2015-12-17
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Carbon-sulfur bond-forming reaction catalysed by the radical SAM enzyme HydE.
Nat.Chem., 8, 2016

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon