Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27265 results

6TVY
DownloadVisualize
BU of 6tvy by Molmil
Structure of hen egg white lysozyme crystallized in the presence of Tb-Xo4 crystallophore in the XtalController device
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:de Wijn, R, Rollet, K, Coudray, L, McEwen, A.G, Lorber, B, Sauter, C.
Deposit date:2020-01-10
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Monitoring the Production of High Diffraction-Quality Crystals of Two Enzymes in Real Time Using In Situ Dynamic Light Scattering
Crystals, 2020
6U0M
DownloadVisualize
BU of 6u0m by Molmil
Structure of the S. cerevisiae replicative helicase CMG in complex with a forked DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, DNA (15-MER), ...
Authors:Yuan, Z, Georgescu, R, Bai, L, Zhang, D, O'Donnell, M, Li, H.
Deposit date:2019-08-14
Release date:2020-03-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:DNA unwinding mechanism of a eukaryotic replicative CMG helicase.
Nat Commun, 11, 2020
7R2A
DownloadVisualize
BU of 7r2a by Molmil
Crystal structure of Ta_Cel5A Y200F variant, apoform
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, EGI, SULFATE ION
Authors:Dutoit, R.
Deposit date:2022-02-04
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of Ta_Cel5A Y200F variant, apoform
To Be Published
7R2Z
DownloadVisualize
BU of 7r2z by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in complex with ATP and ADP resulting from long ATP soak
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Membrane-associated protein slr1513
Authors:Selim, K.A, Albrecht, R, Hartmann, M.D.
Deposit date:2022-02-06
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA.
Proc.Natl.Acad.Sci.USA, 120, 2023
7R32
DownloadVisualize
BU of 7r32 by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803, delta104 variant, in complex with ADP (co-crystal), tetragonal crystal form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Membrane-associated protein slr1513
Authors:Selim, K.A, Albrecht, R, Hartmann, M.D.
Deposit date:2022-02-06
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA.
Proc.Natl.Acad.Sci.USA, 120, 2023
7R38
DownloadVisualize
BU of 7r38 by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pyrococcus furiosus in complex with S-inosyl-L-homocysteine
Descriptor: (2S)-2-AMINO-4-({[(2S,3S,4R,5R)-3,4-DIHYDROXY-5-(6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)TETRAHYDROFURAN-2-YL]METHYL}THIO)BUTANOIC ACID, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Saleem-Batcha, R, Popadic, D, Andexer, J.N.
Deposit date:2022-02-06
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of S-adenosyl-L-homocysteine hydrolase from Pyrococcus furiosus in complex with S-inosyl-L-homocysteine
To Be Published
7R28
DownloadVisualize
BU of 7r28 by Molmil
Crystal structure of Ta_Cel5A E133Q Y200F variant, apoform
Descriptor: EGI, SULFATE ION
Authors:Dutoit, R.
Deposit date:2022-02-04
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal structure of Ta_Cel5A E133Q Y200F variant, apoform
To Be Published
7R3M
DownloadVisualize
BU of 7r3m by Molmil
Structure in solution of the TANGO1 cargo-binding domain (21-131)
Descriptor: Transport and Golgi organization protein 1 homolog
Authors:Arnolds, O, Stoll, R.
Deposit date:2022-02-07
Release date:2023-02-22
Last modified:2023-05-03
Method:SOLUTION NMR
Cite:Characterization of a fold in TANGO1 evolved from SH3 domains for the export of bulky cargos.
Nat Commun, 14, 2023
6W4B
DownloadVisualize
BU of 6w4b by Molmil
The crystal structure of Nsp9 RNA binding protein of SARS CoV-2
Descriptor: Non-structural protein 9
Authors:Tan, K, Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-03-10
Release date:2020-03-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The crystal structure of Nsp9 replicase protein of COVID-19
To Be Published
7R31
DownloadVisualize
BU of 7r31 by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803, C105A+C110A variant, in complex with ATP (co-crystal), tetragonal crystal form
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Membrane-associated protein slr1513, ...
Authors:Selim, K.A, Albrecht, R, Hartmann, M.D.
Deposit date:2022-02-06
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA.
Proc.Natl.Acad.Sci.USA, 120, 2023
6VPO
DownloadVisualize
BU of 6vpo by Molmil
Cryo-EM structure of microtubule-bound KLP61F motor domain in the AMPPNP state
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein Klp61F, ...
Authors:Bodrug, T, Wilson-Kubalek, E.M, Nithianantham, S, Debs, G, Sindelar, C.V, Milligan, R, Al-Bassam, J.
Deposit date:2020-02-04
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The kinesin-5 tail domain directly modulates the mechanochemical cycle of the motor domain for anti-parallel microtubule sliding.
Elife, 9, 2020
6VRN
DownloadVisualize
BU of 6vrn by Molmil
T cell receptor-p53-HLA-A2 complex
Descriptor: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, MHC class I antigen, ...
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-08
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VTC
DownloadVisualize
BU of 6vtc by Molmil
p53-specific T cell receptor
Descriptor: T-cell Receptor 1a2, p53-specific T cell receptor, B-chain
Authors:Wu, D, Gallagher, D.T, Gowthaman, R, Pierce, B.G, Mariuzza, R.A.
Deposit date:2020-02-12
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen.
Nat Commun, 11, 2020
6VU2
DownloadVisualize
BU of 6vu2 by Molmil
M1214_N1 Fab structure
Descriptor: M1214 N1 Fab heavy chain, M1214 N1 Fab light chain
Authors:Pan, R, Kong, X.
Deposit date:2020-02-14
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:VSV-Displayed HIV-1 Envelope Identifies Broadly Neutralizing Antibodies Class-Switched to IgG and IgA.
Cell Host Microbe, 27, 2020
6QBH
DownloadVisualize
BU of 6qbh by Molmil
Crystal structure of human cathepsin D in complex with macrocyclic inhibitor 33
Descriptor: (4~{S},5~{S},9~{S})-5-oxidanyl-4-(phenylmethyl)-9-propan-2-yl-1-oxa-3,8,11-triazacyclodocosane-2,7,10-trione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brynda, J, Houstecka, R, Majer, P, Mares, M.
Deposit date:2018-12-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biomimetic Macrocyclic Inhibitors of Human Cathepsin D: Structure-Activity Relationship and Binding Mode Analysis.
J.Med.Chem., 63, 2020
6QBU
DownloadVisualize
BU of 6qbu by Molmil
Crystal structure of Porcine Pancreatic Elastase (PPE) in complex with the 3-Oxo-beta-Sultam inhibitor LMC188
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Chymotrypsin-like elastase family member 1, PHOSPHATE ION, ...
Authors:Brito, J.A, Almeida, V.T, Carvalho, L.M, Moreira, R, Archer, M.
Deposit date:2018-12-21
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:3-Oxo-beta-sultam as a Sulfonylating Chemotype for Inhibition of Serine Hydrolases and Activity-Based Protein Profiling.
Acs Chem.Biol., 15, 2020
6QD8
DownloadVisualize
BU of 6qd8 by Molmil
EM structure of a EBOV-GP bound to 4M0368 neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Envelope glycoprotein,Virion spike glycoprotein,EBOV-GP1, ...
Authors:Diskin, R, Cohen-Dvashi, H.
Deposit date:2019-01-01
Release date:2019-10-02
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:rVSV-ZEBOV induces a polyclonal and convergent B cell response with potent Ebola virus-neutralizing antibodies
Nat.Med. (N.Y.), 2019
6QEY
DownloadVisualize
BU of 6qey by Molmil
IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties
Descriptor: ACETONITRILE, Insulin-like growth factor 2 mRNA-binding protein 1, PHOSPHATE ION
Authors:Dagil, R, Ball, N.J, Ogrodowicz, R.W, Purkiss, A.G, Taylor, I.A, Ramos, A.
Deposit date:2019-01-09
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties.
Nucleic Acids Res., 47, 2019
8ACV
DownloadVisualize
BU of 8acv by Molmil
WelO5* bound to Zn(II), Cl, and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, ACETATE ION, CHLORIDE ION, ...
Authors:Buller, R, Hueppi, S, Voss, M, Hayashi, T.
Deposit date:2022-07-07
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Enzyme engineering enables inversion of substrate stereopreference of the halogenase WelO5*
Chemcatchem, 2022
2PWD
DownloadVisualize
BU of 2pwd by Molmil
Crystal Structure of the Trehalulose Synthase MUTB from Pseudomonas Mesoacidophila MX-45 Complexed to the Inhibitor Deoxynojirmycin
Descriptor: 1-DEOXYNOJIRIMYCIN, CALCIUM ION, Sucrose isomerase
Authors:Ravaud, S, Robert, X, Haser, R, Aghajari, N.
Deposit date:2007-05-11
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Trehalulose synthase native and carbohydrate complexed structures provide insights into sucrose isomerization.
J.Biol.Chem., 61, 2007
6W6Y
DownloadVisualize
BU of 6w6y by Molmil
Crystal Structure of ADP ribose phosphatase of NSP3 from SARS CoV-2 in complex with AMP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE MONOPHOSPHATE, Non-structural protein 3
Authors:Michalska, K, Kim, Y, Jedrzejczak, R, Maltseva, N, Endres, M, Mesecar, A, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-03-18
Release date:2020-03-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Crystal structures of SARS-CoV-2 ADP-ribose phosphatase: from the apo form to ligand complexes.
Iucrj, 7, 2020
6QJ5
DownloadVisualize
BU of 6qj5 by Molmil
X-ray structure of PPARgamma LBD with the ligand NV1380
Descriptor: (2~{S})-3-methyl-2-[(4-octoxyphenyl)carbonylamino]butanoic acid, Peroxisome proliferator-activated receptor gamma
Authors:Pochetti, G, Montanari, R, Capelli, D.
Deposit date:2019-01-22
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Novel N-Substituted Valine Derivative with Unique Peroxisome Proliferator-Activated Receptor gamma Binding Properties and Biological Activities.
J.Med.Chem., 63, 2020
6W9Z
DownloadVisualize
BU of 6w9z by Molmil
De novo designed receptor transmembrane domains enhance CAR-T cytotoxicity and attenuate cytokine release
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, De novo designed receptor transmembrane domain ProMP C2.1
Authors:Call, M.J, Call, M.E, Chandler, N.J, Nguyen, J.V, Trenker, R.
Deposit date:2020-03-24
Release date:2021-03-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:De novo designed receptor transmembrane domains enhance CAR-T cytotoxicity and attenuate cytokine release
To Be Published
6WBT
DownloadVisualize
BU of 6wbt by Molmil
2.52 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Glucose-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 6-O-phosphono-alpha-D-glucopyranose, MANGANESE (II) ION, ...
Authors:Wu, R, Kim, Y, Endres, M, Joachimiak, J.
Deposit date:2020-03-27
Release date:2021-03-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:2.52 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Glucose-6-phosphate
To Be Published
8AUT
DownloadVisualize
BU of 8aut by Molmil
WelO5* L221A bound to Zn(II), Cl, 2-oxoglutarate, and 12-epi-hapalindole C
Descriptor: 2-OXOGLUTARIC ACID, 3-[(1~{S},2~{R},3~{S},6~{S})-3-ethenyl-2-isocyano-3-methyl-6-prop-1-en-2-yl-cyclohexyl]-1~{H}-indole, CHLORIDE ION, ...
Authors:Buller, R, Hueppi, S, Voss, M, Schaub, D.
Deposit date:2022-08-25
Release date:2022-11-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.685 Å)
Cite:Enzyme engineering enables inversion of substrate stereopreference of the halogenase WelO5*
Chemcatchem, 2022

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon