Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 27191 件

2FMN
DownloadVisualize
BU of 2fmn by Molmil
Ala177Val mutant of E. coli Methylenetetrahydrofolate Reductase complex with LY309887
分子名称: 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, N-[(5-{2-[(6R)-2-AMINO-4-OXO-3,4,5,6,7,8-HEXAHYDROPYRIDO[2,3-D]PYRIMIDIN-6-YL]ETHYL}-2-THIENYL)CARBONYL]-L-GLUTAMIC ACID
著者Pejchal, R, Campbell, E, Guenther, B.D, Lennon, B.W, Matthews, R.G, Ludwig, M.L.
登録日2006-01-09
公開日2006-04-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Perturbations in the Ala -> Val Polymorphism of Methylenetetrahydrofolate Reductase: How Binding of Folates May Protect against Inactivation
Biochemistry, 45, 2006
4UWD
DownloadVisualize
BU of 4uwd by Molmil
HIF prolyl hydroxylase 2 (PHD2/ EGLN1) D315E VARIANT in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/UN9)
分子名称: EGL NINE HOMOLOG 1, MANGANESE (II) ION, N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE
著者Chowdhury, R, Tarhonskaya, H, Schofield, C.J.
登録日2014-08-11
公開日2014-08-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.721 Å)
主引用文献Investigating the Contribution of the Active Site Environment to the Slow Reaction of Hypoxia-Inducible Factor Prolyl Hydroxylase Domain 2 with Oxygen.
Biochem.J., 463, 2014
2FPN
DownloadVisualize
BU of 2fpn by Molmil
The crystal structure of the ywmB protein from Bacillus subtilis
分子名称: ywmB
著者Zhang, R, Wu, R, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-01-16
公開日2006-03-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The crystal structure of the ywmB protein from Bacillus subtilis
To be Published
9JDW
DownloadVisualize
BU of 9jdw by Molmil
CRYSTAL STRUCTURE OF HUMAN L-ARGININE:GLYCINE AMIDINOTRANSFERASE IN COMPLEX WITH ALPHA-AMINO BUTYRIC ACID
分子名称: ALPHA-AMINOBUTYRIC ACID, PROTEIN (L-ARGININE:GLYCINE AMIDINOTRANSFERASE)
著者Fritsche, E, Humm, A, Huber, R.
登録日1998-10-12
公開日1999-02-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The ligand-induced structural changes of human L-Arginine:Glycine amidinotransferase. A mutational and crystallographic study.
J.Biol.Chem., 274, 1999
2FMO
DownloadVisualize
BU of 2fmo by Molmil
Ala177Val mutant of E. coli Methylenetetrahydrofolate Reductase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Pejchal, R, Campbell, E, Guenther, B.D, Lennon, B.W, Matthews, R.G, Ludwig, M.L.
登録日2006-01-09
公開日2006-04-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Perturbations in the Ala -> Val Polymorphism of Methylenetetrahydrofolate Reductase: How Binding of Folates May Protect against Inactivation
Biochemistry, 45, 2006
2FQ4
DownloadVisualize
BU of 2fq4 by Molmil
The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus
分子名称: Transcriptional regulator, TetR family
著者Zhang, R, Wu, R, Moy, S, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-01-17
公開日2006-02-28
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The crystal structure of the transcriptional regulator (TetR family) from Bacillus cereus
To be Published
2FQ3
DownloadVisualize
BU of 2fq3 by Molmil
Structure and function of the SWIRM domain, a conserved protein module found in chromatin regulatory complexes
分子名称: Transcription regulatory protein SWI3
著者Da, G, Lenkart, J, Zhao, K, Shiekhattar, R, Cairns, B.R, Marmorstein, R.
登録日2006-01-17
公開日2006-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure and function of the SWIRM domain, a conserved protein module found in chromatin regulatory complexes
Proc.Natl.Acad.Sci.Usa, 103, 2006
4V6I
DownloadVisualize
BU of 4v6i by Molmil
Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome
分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein RACK1 (RACK1), ...
著者Armache, J.-P, Jarasch, A, Anger, A.M, Villa, E, Becker, T, Bhushan, S, Jossinet, F, Habeck, M, Dindar, G, Franckenberg, S, Marquez, V, Mielke, T, Thomm, M, Berninghausen, O, Beatrix, B, Soeding, J, Westhof, E, Wilson, D.N, Beckmann, R.
登録日2010-10-12
公開日2014-07-09
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (8.8 Å)
主引用文献Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.
Proc.Natl.Acad.Sci.USA, 107, 2010
4UY9
DownloadVisualize
BU of 4uy9 by Molmil
Structure of MLK1 kinase domain with leucine zipper 1
分子名称: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9
著者Read, J.A, Brassington, C, Pollard, H.K, Phillips, C, Green, I, Overmann, R, Collier, M.
登録日2014-08-29
公開日2015-09-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Recurrent Mlk4 Loss-of-Function Mutations Suppress Jnk Signaling to Promote Colon Tumorigenesis.
Cancer Res., 76, 2016
3H3Q
DownloadVisualize
BU of 3h3q by Molmil
Crystal structure of the CERT START domain in complex with HPA-13
分子名称: Goodpasture antigen binding protein, N-[(1R,3R)-3-hydroxy-1-(hydroxymethyl)-3-phenylpropyl]tridecanamide
著者Kudo, N, Wakatsuki, S, Kato, R.
登録日2009-04-17
公開日2010-03-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the CERT START domain with inhibitors provide insights into the mechanism of ceramide transfer.
J.Mol.Biol., 396, 2010
5VE4
DownloadVisualize
BU of 5ve4 by Molmil
Crystal structure of persulfide dioxygenase-rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans
分子名称: BpPRF, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
登録日2017-04-03
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5VET
DownloadVisualize
BU of 5vet by Molmil
PHOSPHOLIPASE A2, RE-REFINEMENT OF THE PDB STRUCTURE 1JQ8 WITHOUT THE PUTATIVE COMPLEXED OLIGOPEPTIDE
分子名称: Phospholipase A2 VRV-PL-VIIIa
著者Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-05
公開日2018-06-20
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VIS
DownloadVisualize
BU of 5vis by Molmil
1.73 Angstrom Resolution Crystal Structure of Dihydropteroate Synthase (folP-SMZ_B27) from Soil Uncultured Bacterium.
分子名称: CHLORIDE ION, D(-)-TARTARIC ACID, Dihydropteroate Synthase, ...
著者Minasov, G, Wawrzak, Z, Di Leo, R, Skarina, T, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-04-17
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献1.73 Angstrom Resolution Crystal Structure of Dihydropteroate Synthase (folP-SMZ_B27) from Soil Uncultured Bacterium.
To Be Published
6Q3S
DownloadVisualize
BU of 6q3s by Molmil
Engineered Human HLA_A2 MHC Class I molecule in complex with TCR and SV9 peptide
分子名称: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
著者Meijers, R, Anjanappa, R, Springer, S, Garcia-Alai, M.
登録日2018-12-04
公開日2019-07-24
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献High-throughput peptide-MHC complex generation and kinetic screenings of TCRs with peptide-receptive HLA-A*02:01 molecules.
Sci Immunol, 4, 2019
5VE5
DownloadVisualize
BU of 5ve5 by Molmil
Crystal structure of persulfide dioxygenase rhodanese fusion protein with rhodanese domain inactivating mutation (C314S) from Burkholderia phytofirmans in complex with glutathione
分子名称: BpPRF, CHLORIDE ION, FE (III) ION, ...
著者Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
登録日2017-04-03
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
3GVK
DownloadVisualize
BU of 3gvk by Molmil
Crystal structure of endo-neuraminidase NF mutant
分子名称: Endo-N-acetylneuraminidase, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-beta-neuraminic acid, ...
著者Schulz, E.C, Dickmanns, A, Ficner, R.
登録日2009-03-31
公開日2010-03-02
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for the recognition and cleavage of polysialic acid by the bacteriophage K1F tailspike protein EndoNF.
J.Mol.Biol., 397, 2010
3H3R
DownloadVisualize
BU of 3h3r by Molmil
Crystal structure of the CERT START domain in complex with HPA-14
分子名称: Goodpasture antigen binding protein, N-[(1R,3R)-3-hydroxy-1-(hydroxymethyl)-3-phenylpropyl]tetradecanamide
著者Kudo, N, Wakatsuki, S, Kato, R.
登録日2009-04-17
公開日2010-03-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structures of the CERT START domain with inhibitors provide insights into the mechanism of ceramide transfer.
J.Mol.Biol., 396, 2010
5VTG
DownloadVisualize
BU of 5vtg by Molmil
The structure of TamB963-1138 from Escherichia coli reveals a novel hydrophobic Beta-taco fold
分子名称: Translocation and assembly module subunit TamB
著者Grinter, R, Josts, I.
登録日2017-05-17
公開日2017-11-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献The Structure of a Conserved Domain of TamB Reveals a Hydrophobic beta Taco Fold.
Structure, 25, 2017
5VYJ
DownloadVisualize
BU of 5vyj by Molmil
Crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from maize in complex with Gly
分子名称: ACETATE ION, GLYCINE, Phosphoenolpyruvate carboxylase
著者Gonzalez-Segura, L, Guemez-Toro, R, Munoz-Clares, R.A.
登録日2017-05-25
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Identification of the allosteric site for neutral amino acids in the maize C4isozyme of phosphoenolpyruvate carboxylase: The critical role of Ser-100.
J. Biol. Chem., 293, 2018
5VEP
DownloadVisualize
BU of 5vep by Molmil
MOUSE KYNURENINE AMINOTRANSFERASE III, RE-REFINEMENT OF THE PDB STRUCTURE 3E2F
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-05
公開日2017-11-29
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VIP
DownloadVisualize
BU of 5vip by Molmil
Crystal structure of Pseudomonas malonate decarboxylase MdcD-MdcE hetero-dimer
分子名称: MdcD, MdcE
著者Maderbocus, R, Tong, L.
登録日2017-04-17
公開日2017-08-16
実験手法X-RAY DIFFRACTION (1.857 Å)
主引用文献Crystal structure of a Pseudomonas malonate decarboxylase holoenzyme hetero-tetramer.
Nat Commun, 8, 2017
5VF5
DownloadVisualize
BU of 5vf5 by Molmil
Crystal structure of the vicilin from Solanum melongena, re-refinement
分子名称: ACETATE ION, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
著者Porebski, P.J, Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
登録日2017-04-06
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5VIT
DownloadVisualize
BU of 5vit by Molmil
Crystal structure of a Pseudomonas malonate decarboxylase hetero-tetramer in complex with malonate
分子名称: MALONATE ION, MdcA, MdcC, ...
著者Maderbocus, R, Tong, L.
登録日2017-04-17
公開日2017-08-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Crystal structure of a Pseudomonas malonate decarboxylase holoenzyme hetero-tetramer.
Nat Commun, 8, 2017
5VE3
DownloadVisualize
BU of 5ve3 by Molmil
Crystal structure of wild-type persulfide dioxygenase-rhodanese fusion protein from Burkholderia phytofirmans
分子名称: BpPRF, FE (III) ION
著者Motl, N, Skiba, M.A, Smith, J.L, Banerjee, R.
登録日2017-04-03
公開日2017-07-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.793 Å)
主引用文献Structural and biochemical analyses indicate that a bacterial persulfide dioxygenase-rhodanese fusion protein functions in sulfur assimilation.
J. Biol. Chem., 292, 2017
5VSV
DownloadVisualize
BU of 5vsv by Molmil
Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P225
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, {2-chloro-5-[({2-[3-(prop-1-en-2-yl)phenyl]propan-2-yl}carbamoyl)amino]phenoxy}acetic acid
著者Maltseva, N, Kim, Y, Mulligan, R, Makowska-Grzyska, M, Gu, M, Gollapalli, D.R, Hedstrom, L, Joachimiak, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-05-12
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and P225
To Be Published

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon