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PDB: 27265 件

8RI3
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Crystal structure of transplatin/B-DNA adduct obtained upon 7 days of soaking
分子名称: AMMONIA, CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), ...
著者Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A.
登録日2023-12-18
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
1GHE
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CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A
分子名称: ACETYL COENZYME *A, ACETYLTRANSFERASE
著者He, H, Ding, Y, Bartlam, M, Sun, F, Le, Y, Qin, X, Tang, H, Zhang, R, Joachimiak, A, Liu, Y, Zhao, N, Rao, Z.
登録日2000-12-13
公開日2003-01-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Tabtoxin Resistance Protein Complexed with Acetyl Coenzyme A Reveals the Mechanism for beta-Lactam Acetylation
J.Mol.Biol., 325, 2003
1FU0
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CRYSTAL STRUCTURE ANALYSIS OF THE PHOSPHO-SERINE 46 HPR FROM ENTEROCOCCUS FAECALIS
分子名称: PHOSPHOCARRIER PROTEIN HPR
著者Audette, G.F, Engelmann, R, Hengstenberg, W, Deutscher, J, Hayakawa, K, Quail, J.W, Delbaere, L.T.J.
登録日2000-09-13
公開日2000-11-22
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The 1.9 A resolution structure of phospho-serine 46 HPr from Enterococcus faecalis.
J.Mol.Biol., 303, 2000
1GHV
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A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
分子名称: 2-(2-OXO-1,2-DIHYDRO-PYRIDIN-3-YL)-1H-BENZOIMIDAZOLE-5-CARBOXAMIDINE, ACETYL HIRUDIN, SODIUM ION, ...
著者Katz, B.A, Elrod, K, Luong, C, Rice, M, Mackman, R.L, Sprengeler, P.A, Spencer, J, Hatayte, J, Janc, J, Link, J, Litvak, J, Rai, R, Rice, K, Sideris, S, Verner, E, Young, W.
登録日2001-01-22
公開日2002-01-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A novel serine protease inhibition motif involving a multi-centered short hydrogen bonding network at the active site.
J.Mol.Biol., 307, 2001
1GI9
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A NOVEL SERINE PROTEASE INHIBITION MOTIF INVOLVING A MULTI-CENTERED SHORT HYDROGEN BONDING NETWORK AT THE ACTIVE SITE
分子名称: 2-(2-HYDROXY-5-METHOXY-PHENYL)-1H-BENZOIMIDAZOLE-5-CARBOXAMIDINE, CITRIC ACID, UROKINASE-TYPE PLASMINOGEN ACTIVATOR
著者Katz, B.A, Elrod, K, Luong, C, Rice, M, Mackman, R.L, Sprengeler, P.A, Spencer, J, Hatayte, J, Janc, J, Link, J, Litvak, J, Rai, R, Rice, K, Sideris, S, Verner, E, Young, W.
登録日2001-01-22
公開日2002-01-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel serine protease inhibition motif involving a multi-centered short hydrogen bonding network at the active site.
J.Mol.Biol., 307, 2001
2IFT
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BU of 2ift by Molmil
Crystal structure of putative methylase HI0767 from Haemophilus influenzae. NESG target IR102.
分子名称: Putative methylase HI0767
著者Vorobiev, S.M, Su, M, Seetharaman, J, Shastry, R, Janjua, H, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2006-09-21
公開日2006-10-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the putative methylase HI0767 from Haemophilus influenzae.
To be Published
5IYB
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Human core-PIC in the open state
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-24
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
8RI9
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Late alpha-Synuclein fibril structure from liquid-liquid phase separations.
分子名称: Alpha-synuclein
著者De Simone, A, Barritt, J.D, Chen, S, Cascella, R, Cecchi, C, Bigi, A, Jarvis, J.A, Chiti, F, Dobson, C.M, Fusco, G.
登録日2023-12-18
公開日2024-03-06
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure-Toxicity Relationship in Intermediate Fibrils from alpha-Synuclein Condensates.
J.Am.Chem.Soc., 146, 2024
5J28
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Ki67-PP1g (protein phosphatase 1, gamma isoform) holoenzyme complex
分子名称: Antigen KI-67, MALONATE ION, SODIUM ION, ...
著者Kumar, G.S, Peti, W, Page, R.
登録日2016-03-29
公開日2016-10-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism.
Elife, 5, 2016
7B22
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BU of 7b22 by Molmil
Vibrio cholerae ParD2 Antitoxin
分子名称: Antitoxin ParD
著者Garcia-Rodriguez, G, Loris, R.
登録日2020-11-25
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Entropic pressure controls the oligomerization of the Vibrio cholerae ParD2 antitoxin.
Acta Crystallogr D Struct Biol, 77, 2021
4WKS
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BU of 4wks by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
分子名称: Acyl-homoserine lactone acylase PvdQ, ethylboronic acid
著者Wu, R, Clevenger, D.K, Fast, W, Liu, D.
登録日2014-10-03
公開日2014-11-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.629 Å)
主引用文献n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014
1NSW
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The Crystal Structure of the K18G Mutant of the thioredoxin from Alicyclobacillus acidocaldarius
分子名称: THIOREDOXIN
著者Bartolucci, S, De Simone, G, Galdiero, S, Improta, R, Menchise, V, Pedone, C, Pedone, E, Saviano, M.
登録日2003-01-28
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An integrated structural and computational study of the thermostability of two thioredoxin mutants from Alicyclobacillus acidocaldarius
J.Bacteriol., 185, 2003
1G61
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CRYSTAL STRUCTURE OF M.JANNASCHII EIF6
分子名称: TRANSLATION INITIATION FACTOR 6
著者Groft, C.M, Beckmann, R, Sali, A, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2000-11-02
公開日2000-11-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structures of ribosome anti-association factor IF6.
Nat.Struct.Biol., 7, 2000
8QZK
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Catalytic core of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF) concieved by deep network hallucination: dEngBF4 Hexagonal form
分子名称: ENDO-ALPHA-N-ACETYLGALACTOSAMINIDASE
著者Aghajari, N, Hansen, A.L, Thiesen, F.F, Crehuet, R, Marcos, E, Willemoes, M.
登録日2023-10-27
公開日2024-03-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Carving out a Glycoside Hydrolase Active Site for Incorporation into a New Protein Scaffold Using Deep Network Hallucination.
Acs Synth Biol, 13, 2024
2J4E
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BU of 2j4e by Molmil
THE ITP COMPLEX OF HUMAN INOSINE TRIPHOSPHATASE
分子名称: INOSINE 5'-TRIPHOSPHATE, INOSINE TRIPHOSPHATE PYROPHOSPHATASE, INOSINIC ACID, ...
著者Stenmark, P, Kursula, P, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmbergschiavone, L, Hogbom, M, Kotenyova, T, Landry, R, Loppnau, P, Magnusdottir, A, Nilsson-Ehle, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Sundstrom, M, Uppenberg, J, Thorsell, A.G, Schuler, H, Van Den Berg, S, Wallden, K, Weigelt, J, Nordlund, P.
登録日2006-08-29
公開日2006-09-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Human Inosine Triphosphatase: Substrate Binding and Implication of the Inosine Triphosphatase Deficiency Mutation P32T.
J.Biol.Chem., 282, 2007
8PV2
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Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1
分子名称: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-11-15
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
1G87
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THE CRYSTAL STRUCTURE OF ENDOGLUCANASE 9G FROM CLOSTRIDIUM CELLULOLYTICUM
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDOCELLULASE 9G, ...
著者Mandelman, D, Belaich, A, Belaich, J.P, Aghajari, N, Driguez, H, Haser, R.
登録日2000-11-16
公開日2003-07-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-Ray Crystal Structure of the Multidomain Endoglucanase Cel9G from Clostridium cellulolyticum Complexed with Natural and Synthetic Cello-Oligosaccharides
J.BACTERIOL., 185, 2003
1G8Q
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CRYSTAL STRUCTURE OF HUMAN CD81 EXTRACELLULAR DOMAIN, A RECEPTOR FOR HEPATITIS C VIRUS
分子名称: CD81 ANTIGEN, EXTRACELLULAR DOMAIN
著者Kitadokoro, K, Bolognesi, M, Bordo, D, Grandi, G, Galli, G, Petracca, R, Falugi, F.
登録日2000-11-20
公開日2001-02-21
最終更新日2018-04-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献CD81 extracellular domain 3D structure: insight into the tetraspanin superfamily structural motifs.
EMBO J., 20, 2001
8PUW
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BU of 8puw by Molmil
Chaetomium thermophilum Las1-Grc3-complex
分子名称: Las1, Polynucleotide 5'-hydroxyl-kinase GRC3
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-11-15
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
7ALQ
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human GCH-GFRP inhibitory complex 7-deaza-GTP bound
分子名称: 7,8-DIHYDROBIOPTERIN, 7-deaza-GTP, GTP cyclohydrolase 1, ...
著者Ebenhoch, R, Nar, H.
登録日2020-10-07
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献Biophysical and structural investigation of the regulation of human GTP cyclohydrolase I by its regulatory protein GFRP.
J.Struct.Biol., 213, 2021
5K7Z
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Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA
分子名称: DNA (32-MER), Isovaleryl-coenzyme A, Transcriptional regulator, ...
著者Bock, T, Volz, C, Mueller, R, Blankenfeldt, W.
登録日2016-05-27
公開日2016-12-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Crystal structure of AibR in complex with isovaleryl coenzyme A and operator DNA
to be published
8PV3
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Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure
分子名称: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-11-15
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
8PTW
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Chaetomium thermophilum Rix1-complex
分子名称: Pre-rRNA-processing protein IPI3, Pre-rRNA-processing protein RIX1
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-15
公開日2023-11-15
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
8PV7
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Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure
分子名称: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-11-15
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.12 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
5K9V
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Protein Tyrosine Phosphatase 1B (1-301), open state
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Choy, M.S, Peti, W, Page, R.
登録日2016-06-01
公開日2017-03-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery.
Mol. Cell, 65, 2017

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件を2024-08-14に公開中

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