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PDB: 95 件
4GT3
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ATP-bound form of the ERK2 kinase
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Pozharski, E, Zhang, J, Shapiro, P.
登録日2012-08-28
公開日2012-09-12
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献ATP-bound form of the ERK2 kinase
TO BE PUBLISHED
1Q72
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BU of 1q72 by Molmil
Anti-Cocaine Antibody M82G2 Complexed with Cocaine
分子名称: COCAINE, Fab M82G2, Heavy chain, ...
著者Pozharski, E, Moulin, A, Hewagama, A, Shanafelt, A.B, Petsko, G.A, Ringe, D.
登録日2003-08-15
公開日2003-08-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2.
J.Mol.Biol., 349, 2005
1QYG
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BU of 1qyg by Molmil
ANTI-COCAINE ANTIBODY M82G2 COMPLEXED WITH BENZOYLECGONINE
分子名称: 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID, FAB M82G2, HEAVY CHAIN, ...
著者Pozharski, E, Hewagama, A, Shanafelt, A, Petsko, G, Ringe, D.
登録日2003-09-10
公開日2003-09-23
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2.
J.Mol.Biol., 349, 2005
1Q0Y
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BU of 1q0y by Molmil
Anti-Morphine Antibody 9B1 Complexed with Morphine
分子名称: (7R,7AS,12BS)-3-METHYL-2,3,4,4A,7,7A-HEXAHYDRO-1H-4,12-METHANO[1]BENZOFURO[3,2-E]ISOQUINOLINE-7,9-DIOL, Fab 9B1, Heavy chain, ...
著者Pozharski, E, Wilson, M.A, Hewagama, A, Shanafelt, A.B, Petsko, G, Ringe, D.
登録日2003-07-17
公開日2004-04-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Anchoring a cationic ligand: the structure of the Fab fragment of the anti-morphine antibody 9B1 and its complex with morphine
J.Mol.Biol., 337, 2004
1RIU
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BU of 1riu by Molmil
Anti-Cocaine Antibody M82G2 Complexed With Norbenzoylecgonine
分子名称: 3-(BENZOYLOXY)-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID, Fab M82G2, Heavy Chain, ...
著者Pozharski, E, Hewagama, A, Shanafelt, A, Petsko, G, Ringe, D.
登録日2003-11-18
公開日2003-12-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Carving a Binding Site: Structural Study of an Anti-Cocaine Antibody in Complex with Three Cocaine Analogs
To be Published
1RIV
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BU of 1riv by Molmil
Anti-Cocaine Antibody M82G2 Complexed With meta-Oxybenzoylecgonine
分子名称: 3-(3-HYDROXY-BENZOYLOXY)-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID, Fab M82G2, Heavy Chain, ...
著者Pozharski, E, Hewagama, A, Shanafelt, A, Petsko, G, Ringe, D.
登録日2003-11-18
公開日2003-12-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Carving a Binding Site: Structural Study of an Anti-Cocaine Antibody in Complex with Three Cocaine Analogs
To be Published
1RFD
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BU of 1rfd by Molmil
ANTI-COCAINE ANTIBODY M82G2
分子名称: Fab M82G2, Heavy Chain, Light Chain
著者Pozharski, E, Hewagama, A, Shanafelt, A.B, Petsko, G.A, Ringe, D.
登録日2003-11-07
公開日2003-11-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Diversity in hapten recognition: structural study of an anti-cocaine antibody M82G2.
J.Mol.Biol., 349, 2005
1Q0X
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BU of 1q0x by Molmil
Anti-morphine Antibody 9B1 Unliganded Form
分子名称: Fab 9B1, heavy chain, light chain, ...
著者Pozharski, E, Wilson, M.A, Hewagama, A, Shanafelt, A.B, Petsko, G, Ringe, D.
登録日2003-07-17
公開日2004-04-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Anchoring a cationic ligand: the structure of the Fab fragment of the anti-morphine antibody 9B1 and its complex with morphine
J.Mol.Biol., 337, 2004
3RDK
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BU of 3rdk by Molmil
Protein crystal structure of xylanase A1 of Paenibacillus sp. JDR-2
分子名称: 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose, CHLORIDE ION, Endo-1,4-beta-xylanase, ...
著者Pozharski, E, St John, F.J.
登録日2011-04-01
公開日2012-04-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Novel structural features of xylanase A1 from Paenibacillus sp. JDR-2.
J.Struct.Biol., 180, 2012
3RO8
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Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2
分子名称: CHLORIDE ION, Endo-1,4-beta-xylanase, MAGNESIUM ION
著者Pozharski, E, St John, F.J.
登録日2011-04-25
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Novel structural features of xylanase A1 from Paenibacillus sp. JDR-2.
J.Struct.Biol., 180, 2012
3PHT
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BU of 3pht by Molmil
Crystal structure of H74A mutant of Helicobacter Pylori NikR
分子名称: NICKEL (II) ION, Putative nickel-responsive regulator
著者Pozharski, E, Evans, S, Michel, S.
登録日2010-11-04
公開日2011-11-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect.
Proc.Natl.Acad.Sci.USA, 109, 2012
8TTW
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BU of 8ttw by Molmil
Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074
分子名称: 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Tolbert, W.D, Pozharski, E, Pazgier, M.
登録日2023-08-15
公開日2023-11-08
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
7RQ6
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BU of 7rq6 by Molmil
Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CV3-13 Fab heavy chain, ...
著者Chen, Y, Pozharski, E, Tolbert, W.D, Pazgier, M.
登録日2021-08-05
公開日2022-04-20
最終更新日2023-08-09
実験手法ELECTRON MICROSCOPY (4.18 Å)
主引用文献A Fc-enhanced NTD-binding non-neutralizing antibody delays virus spread and synergizes with a nAb to protect mice from lethal SARS-CoV-2 infection.
Cell Rep, 38, 2022
5K89
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BU of 5k89 by Molmil
Crystal Structure of Human Calcium-Bound S100A1
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Protein S100-A1
著者Melville, Z, Aligholizadeh, E, McKnight, L.E, Weber, D, Pozharski, E, Weber, D.J.
登録日2016-05-27
公開日2017-04-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献X-ray crystal structure of human calcium-bound S100A1.
Acta Crystallogr F Struct Biol Commun, 73, 2017
4LND
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BU of 4lnd by Molmil
Crystal structure of human apurinic/apyrimidinic endonuclease 1 with essential Mg2+ cofactor
分子名称: DNA-(apurinic or apyrimidinic site) lyase, MAGNESIUM ION
著者Manvilla, B.A, Pozharski, E, Toth, E.A, Drohat, A.C.
登録日2013-07-11
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure of human apurinic/apyrimidinic endonuclease 1 with the essential Mg(2+) cofactor.
Acta Crystallogr.,Sect.D, 69, 2013
8CZZ
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BU of 8czz by Molmil
Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer with LMHS mutations in complex with Temsavir, 8ANC195, and 10-1074
分子名称: 1-[4-(benzenecarbonyl)piperazin-1-yl]-2-[4-methoxy-7-(3-methyl-1H-1,2,4-triazol-1-yl)-1H-pyrrolo[2,3-c]pyridin-3-yl]ethane-1,2-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, Y, Pozharski, E, Tolbert, W, Pazgier, M.
登録日2022-05-25
公開日2023-05-31
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structure-function analyses reveal key molecular determinants of HIV-1 CRF01_AE resistance to the entry inhibitor temsavir.
Nat Commun, 14, 2023
7TC2
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BU of 7tc2 by Molmil
Human APE1 in complex with 5-nitroindole-2-carboxylic acid
分子名称: 1,2-ETHANEDIOL, 5-nitro-1H-indole-2-carboxylic acid, DI(HYDROXYETHYL)ETHER, ...
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2021-12-22
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Characterizing inhibitors of human AP endonuclease 1.
Plos One, 18, 2023
7TC3
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Human APE1 in the apo form
分子名称: 1,2-ETHANEDIOL, DNA-(apurinic or apyrimidinic site) endonuclease, mitochondrial
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2021-12-22
公開日2022-12-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.252 Å)
主引用文献Characterizing inhibitors of human AP endonuclease 1.
Plos One, 18, 2023
5JXY
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Enzyme-substrate complex of TDG catalytic domain bound to a G/U analog
分子名称: DNA (28-MER), G/T mismatch-specific thymine DNA glycosylase
著者Pidugu, L.S, Pozharski, E, Malik, S.S, Drohat, A.C.
登録日2016-05-13
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural basis of damage recognition by thymine DNA glycosylase: Key roles for N-terminal residues.
Nucleic Acids Res., 44, 2016
7KZ0
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BU of 7kz0 by Molmil
Human MBD4 glycosylase domain bound to DNA containing substrate analog 2'-deoxy-pseudouridine
分子名称: DNA (5'-D(*CP*CP*AP*GP*CP*GP*(P2U)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), GLYCEROL, ...
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2020-12-09
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural Insights into the Mechanism of Base Excision by MBD4.
J.Mol.Biol., 433, 2021
7KZG
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BU of 7kzg by Molmil
Human MBD4 glycosylase domain bound to DNA containing oxacarbenium-ion analog 1-aza-2'-deoxyribose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Pidugu, L.S, Pozharski, E, Drohat, A.C.
登録日2020-12-10
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural Insights into the Mechanism of Base Excision by MBD4.
J.Mol.Biol., 433, 2021
7KZ1
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BU of 7kz1 by Molmil
Human MBD4 glycosylase domain bound to DNA containing an abasic site
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*GP*CP*GP*(ORP)P*GP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*GP*CP*GP*CP*TP*GP*G)-3'), ...
著者Pidugu, L.S, Bright, H, Pozharski, E, Drohat, A.C.
登録日2020-12-09
公開日2021-11-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structural Insights into the Mechanism of Base Excision by MBD4.
J.Mol.Biol., 433, 2021
8EKK
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BU of 8ekk by Molmil
Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 2
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
8EKM
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BU of 8ekm by Molmil
Clostridioides difficile binary toxin translocase CDTb double mutant - D623A D734A
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published
8EKL
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Clostridioides difficile binary toxin translocase CDTb wild-type after calcium depletion from receptor binding domain 1 (RBD1) - Class 1
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Abeyawardhane, D.L, Pozharski, E.
登録日2022-09-21
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Calcium-mediated Pore Formation of Clostridioides difficile Binary Toxin
To Be Published

227111

件を2024-11-06に公開中

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