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PDB: 69 results

5VST
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Crystal structure of murine CEACAM1b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Biliary glycoprotein
Authors:Peng, G, Yang, Y, Pasquarella, J.R, Xu, L, Qian, Z, Holmes, K.V, Li, F.
Deposit date:2017-05-12
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular mechanism for coronavirus-driven evolution of mouse receptor
J. Biol. Chem., 292, 2017
5MFT
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BU of 5mft by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-1-bromo-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017
5MFR
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BU of 5mfr by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017
5MFS
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BU of 5mfs by Molmil
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: Aminopeptidase N, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Peng, G, Olieric, V, McEwen, A.G, Schmitt, C, Albrecht, S, Cavarelli, J, Tarnus, C.
Deposit date:2016-11-18
Release date:2017-04-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Insight into the remarkable affinity and selectivity of the aminobenzosuberone scaffold for the M1 aminopeptidases family based on structure analysis.
Proteins, 85, 2017
3R4D
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BU of 3r4d by Molmil
Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CEA-related cell adhesion molecule 1, ...
Authors:Peng, G.Q, Sun, D.W, Rajashankar, K.R, Qian, Z.H, Holmes, K.V, Li, F.
Deposit date:2011-03-17
Release date:2011-06-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor.
Proc.Natl.Acad.Sci.USA, 108, 2011
4ZUH
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BU of 4zuh by Molmil
Complex structure of PEDV 3CLpro mutant (C144A) with a peptide substrate.
Descriptor: PEDV 3C-Like protease, peptide substrate SAVLQSGF
Authors:Ye, G, Fu, Z.F, Peng, G.Q.
Deposit date:2015-05-16
Release date:2016-06-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.394 Å)
Cite:Structural basis for the dimerization and substrate recognition specificity of porcine epidemic diarrhea virus 3C-like protease.
Virology, 494, 2016
5HIY
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BU of 5hiy by Molmil
Crystal structure of PEDV NSP9 Mutant-C59A
Descriptor: Non-structural protein 9
Authors:Deng, F, Peng, G.
Deposit date:2016-01-12
Release date:2017-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dimerization of Coronavirus nsp9 with Diverse Modes Enhances Its Nucleic Acid Binding Affinity.
J.Virol., 92, 2018
5OVQ
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BU of 5ovq by Molmil
Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF
Descriptor: Peroxiredoxin, UNKNOWN LIGAND
Authors:Warkentin, E, Peng, G.
Deposit date:2017-08-29
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural properties of the peroxiredoxin AhpC2 from the hyperthermophilic eubacterium Aquifex aeolicus.
Biochim Biophys Acta Gen Subj, 1862, 2018
6LIS
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BU of 6lis by Molmil
ASFV dUTPase in complex with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, E165R
Authors:Liang, R, Peng, G.Q.
Deposit date:2019-12-12
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural comparisons of host and African swine fever virus dUTPases reveal new clues for inhibitor development.
J.Biol.Chem., 296, 2020
6LJ3
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BU of 6lj3 by Molmil
full length ASFV dUTPase in complex with alpha,beta-iminodUTP and magnesium ion
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, E165R, MAGNESIUM ION
Authors:Liang, R, Peng, G.Q.
Deposit date:2019-12-13
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural comparisons of host and African swine fever virus dUTPases reveal new clues for inhibitor development.
J.Biol.Chem., 296, 2020
6LJO
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BU of 6ljo by Molmil
African swine fever virus dUTPase
Descriptor: E165R
Authors:Liang, R, Peng, G.Q.
Deposit date:2019-12-17
Release date:2020-11-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural comparisons of host and African swine fever virus dUTPases reveal new clues for inhibitor development.
J.Biol.Chem., 296, 2020
6LKX
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BU of 6lkx by Molmil
The structure of PRRSV helicase
Descriptor: CITRIC ACID, GLYCEROL, RNA-dependent RNA polymerase, ...
Authors:Shi, Y.J, Tong, X.H, Peng, G.Q.
Deposit date:2019-12-20
Release date:2020-05-27
Last modified:2021-06-09
Method:X-RAY DIFFRACTION (2.998 Å)
Cite:Structural Characterization of the Helicase nsp10 Encoded by Porcine Reproductive and Respiratory Syndrome Virus.
J.Virol., 94, 2020
6L70
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BU of 6l70 by Molmil
Complex structure of PEDV 3CLpro with GC376
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, PEDV main protease
Authors:Ye, G, Peng, G.Q.
Deposit date:2019-10-30
Release date:2020-04-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Basis for Inhibiting Porcine Epidemic Diarrhea Virus Replication with the 3C-Like Protease Inhibitor GC376.
Viruses, 12, 2020
6LPA
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BU of 6lpa by Molmil
The nsp1 protein of a new porcine coronavirus
Descriptor: sp1 protein
Authors:Shen, Z, Peng, G.Q.
Deposit date:2020-01-09
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Structural and Biological Basis of Alphacoronavirus nsp1 Associated with Host Proliferation and Immune Evasion.
Viruses, 12, 2020
7Q5Y
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BU of 7q5y by Molmil
Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Warkentin, E, Ermler, U, Peng, G.
Deposit date:2021-11-05
Release date:2022-11-16
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of NADH:ubichinon oxidoreductase (complex I) of the hyperthermophilic eubacterium Aquifex aeolicus
To Be Published
7CYD
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BU of 7cyd by Molmil
Cryo-EM structures of Alphacoronavirus spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Song, X, Shi, Y, Ding, W, Liu, Z.J, Peng, G.
Deposit date:2020-09-03
Release date:2020-12-23
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Cryo-EM analysis of the HCoV-229E spike glycoprotein reveals dynamic prefusion conformational changes.
Nat Commun, 12, 2021
1GM0
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BU of 1gm0 by Molmil
A Form of the Pheromone-Binding Protein from Bombyx mori
Descriptor: PHEROMONE-BINDING PROTEIN
Authors:Horst, R, Damberger, F, Guntert, P, Luginbuhl, P, Nikonova, L, Peng, G, Leal, W.S, Wuthrich, K.
Deposit date:2001-09-05
Release date:2001-11-30
Last modified:2018-01-17
Method:SOLUTION NMR
Cite:NMR Structure Reveals Novel Intramolecular Regulation Mechanism for Pheromone-Binding and Release
Proc.Natl.Acad.Sci.USA, 98, 2001
6LNL
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BU of 6lnl by Molmil
ASFV core shell protein p15
Descriptor: 60 kDa polyprotein
Authors:Guo, F, Shi, Y, Peng, G.
Deposit date:2019-12-30
Release date:2020-12-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9286 Å)
Cite:The structural basis of African swine fever virus core shell protein p15 binding to DNA.
Faseb J., 35, 2021
3KBH
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BU of 3kbh by Molmil
Crystal structure of NL63 respiratory coronavirus receptor-binding domain complexed with its human receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike glycoprotein
Authors:Wu, K, Li, W, Peng, G, Li, F.
Deposit date:2009-10-20
Release date:2009-12-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Crystal structure of NL63 respiratory coronavirus receptor-binding domain complexed with its human receptor.
Proc.Natl.Acad.Sci.USA, 106, 2009
6VSJ
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BU of 6vsj by Molmil
Cryo-electron microscopy structure of mouse coronavirus spike protein complexed with its murine receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Carcinoembryonic antigen-related cell adhesion molecule 1, Spike glycoprotein
Authors:Shang, J, Wan, Y.S, Liu, C, Yount, B, Gully, K, Yang, Y, Auerbach, A, Peng, G.Q, Baric, R, Li, F.
Deposit date:2020-02-11
Release date:2020-03-04
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Structure of mouse coronavirus spike protein complexed with receptor reveals mechanism for viral entry.
Plos Pathog., 16, 2020
3HYV
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BU of 3hyv by Molmil
3-D X-Ray structure of the sulfide:quinone oxidoreductase from the hyperthermophilic bacterium Aquifex aeolicus
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Marcia, M, Ermler, U, Peng, G.H, Michel, H.
Deposit date:2009-06-23
Release date:2009-07-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration
Proc.Natl.Acad.Sci.USA, 106, 2009
3HYW
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BU of 3hyw by Molmil
3-D X-Ray structure of the sulfide:quinone oxidoreductase of the hyperthermophilic bacterium Aquifex aeolicus in complex with decylubiquinone
Descriptor: 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione, DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Marcia, M, Ermler, U, Peng, G.H, Michel, H.
Deposit date:2009-06-23
Release date:2009-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration
Proc.Natl.Acad.Sci.USA, 106, 2009
3HYX
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BU of 3hyx by Molmil
3-D X-Ray structure of the sulfide:quinone oxidoreductase from Aquifex aeolicus in complex with Aurachin C
Descriptor: 1-hydroxy-2-methyl-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]quinolin-4(1H)-one, DODECYL-BETA-D-MALTOSIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Marcia, M, Ermler, U, Peng, G.H, Michel, H.
Deposit date:2009-06-23
Release date:2009-07-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration
Proc.Natl.Acad.Sci.USA, 106, 2009
4XFQ
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BU of 4xfq by Molmil
Crystal Structure Basis for PEDV 3C Like Protease
Descriptor: PEDV main protease
Authors:Ye, G, Fu, Z.F, Peng, G.Q.
Deposit date:2014-12-28
Release date:2016-01-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for the dimerization and substrate recognition specificity of porcine epidemic diarrhea virus 3C-like protease.
Virology, 494, 2016
5MH2
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BU of 5mh2 by Molmil
Crystal structure of a DM9 domain containing protein from Crassostrea gigas with D22A mutation
Descriptor: CHLORIDE ION, GLYCEROL, Natterin-3
Authors:Weinert, T, Warkentin, E, Peng, G.
Deposit date:2016-11-22
Release date:2017-12-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum.
Front Immunol, 8, 2017

 

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