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PDB: 371 results

1TWY
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Crystal structure of an ABC-type phosphate transport receptor from Vibrio cholerae
Descriptor: ABC transporter, periplasmic substrate-binding protein, MAGNESIUM ION, ...
Authors:Ramagopal, U.A, Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-07-01
Release date:2004-12-21
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of hypothetical ABC-type phosphate transporter
To be Published
7LG3
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BU of 7lg3 by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
To Be Published
7LG0
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Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
Descriptor: Beta-2-microglobulin, HEXAETHYLENE GLYCOL, HLA class I histocompatibility antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
To Be Published
7LFZ
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Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope IPRRNVATL
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope IPRRNVATL
To Be Published
7LG2
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BU of 7lg2 by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope ALWEIQQVV
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope ALWEIQQVV
To Be Published
2YBD
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BU of 2ybd by Molmil
Crystal structure of probable had family hydrolase from pseudomonas fluorescens pf-5 with bound phosphate
Descriptor: HYDROLASE, HALOACID DEHALOGENASE-LIKE FAMILY, MAGNESIUM ION, ...
Authors:Vetting, M.W, Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Burley, S.K, Dunaway-Mariano, D, Allen, K.N, Gerlt, J.A, Almo, S.C.
Deposit date:2011-03-03
Release date:2011-03-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Crystal Structure of Probable Had Family Hydrolase from Pseudomonas Fluorescens Pf-5 with Bound Phosphate
To be Published
2A2L
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BU of 2a2l by Molmil
Crystal structure of Klebsiella pneumoniae protein ORFY, Pfam DUF336
Descriptor: unknown
Authors:Ramagopal, U, Patskovsky, Y, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-06-22
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Klebsiella Pneumoniae Hypothetical Protein Orfy
To be Published
3B40
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BU of 3b40 by Molmil
Crystal structure of the probable dipeptidase PvdM from Pseudomonas aeruginosa
Descriptor: CADMIUM ION, CALCIUM ION, MAGNESIUM ION, ...
Authors:Bonanno, J.B, Patskovsky, Y, Dickey, M, Bain, K.T, Mendoza, M, Fong, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-10-23
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the probable dipeptidase PvdM from Pseudomonas aeruginosa.
To be Published
1YFF
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BU of 1yff by Molmil
STRUCTURE OF HUMAN CARBONMONOXYHEMOGLOBIN C (BETA E6K): TWO QUATERNARY STATES (R2 and R3) IN ONE CRYSTAL
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Patskovska, L, Patskovsky, Y, Hirsch, R.E, Almo, S.C.
Deposit date:2004-12-31
Release date:2005-01-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanism of Quaternary Transitions in Human Liganded Hemoglobin
To be Published
3BGE
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Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae
Descriptor: Predicted ATPase, SULFATE ION
Authors:Ramagopal, U.A, Patskovsky, Y, Bonanno, J.B, Meyer, A.J, Toro, R, Freeman, J, Adams, J, Koss, J, Maletic, M, Gheyi, T, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-11-26
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the C-terminal fragment of AAA+ATPase from Haemophilus influenzae.
To be Published
3BUT
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BU of 3but by Molmil
Crystal structure of protein Af_0446 from Archaeoglobus fulgidus
Descriptor: Uncharacterized protein Af_0446
Authors:Bonanno, J.B, Patskovsky, Y, Ozyurt, S, Ashok, S, Zhang, F, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-01-03
Release date:2008-01-15
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of protein Af_0446 from Archaeoglobus fulgidus.
To be Published
2O3J
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BU of 2o3j by Molmil
Structure of Caenorhabditis Elegans UDP-Glucose Dehydrogenase
Descriptor: GLYCEROL, UDP-glucose 6-dehydrogenase
Authors:Zhang, Y, Zhan, C, Patskovsky, Y, Ramagopal, U, Shi, W, Toro, R, Wengerter, B.C, Milst, S, Vidal, M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-12-01
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal Structure of Caenorhabditis Elegans Udp-Glucose Dehydrogenase
To be Published
4K9Z
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BU of 4k9z by Molmil
Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P6222
Descriptor: CHLORIDE ION, Putative thiol-disulfide oxidoreductase
Authors:Vetting, M.W, Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R.D, Bonanno, J.B, Armstrong, R.N, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-21
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P6222
To be Published
2I1Y
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BU of 2i1y by Molmil
Crystal structure of the phosphatase domain of human PTP IA-2
Descriptor: GLYCEROL, Receptor-type tyrosine-protein phosphatase
Authors:Faber-Barata, J, Patskovsky, Y, Alvarado, J, Smith, D, Koss, J, Wasserman, S.R, Ozyurt, S, Atwell, S, Powell, A, Kearins, M.C, Maletic, M, Rooney, I, Bain, K.T, Freeman, M, Russell, J.C, Thompson, D.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-15
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structural genomics of protein phosphatases
J.STRUCT.FUNCT.GENOM., 8, 2007
2GQF
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BU of 2gqf by Molmil
Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Hypothetical protein HI0933, SULFATE ION
Authors:Mulichak, A.M, Patskovsky, Y, Keefe, L.J, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-04-20
Release date:2006-05-30
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of hypothetical flavoprotein HI0933 from Haemophilus influenzae Rd.
To be Published
4KA0
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BU of 4ka0 by Molmil
Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P21221
Descriptor: CHLORIDE ION, Putative thiol-disulfide oxidoreductase
Authors:Vetting, M.W, Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R.D, Bonanno, J.B, Armstrong, R.N, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-21
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a putative thiol-disulfide oxidoreductase from Bacteroides vulgatus (target NYSGRC-011676), space group P21221
To be Published
2HC9
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BU of 2hc9 by Molmil
Structure of Caenorhabditis elegans leucine aminopeptidase-zinc complex (LAP1)
Descriptor: BICARBONATE ION, GLYCEROL, Leucine aminopeptidase 1, ...
Authors:Zhan, C, Patskovsky, Y, Wengerter, B.C, Ramagopal, U, Milstein, S, Vidal, M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-06-15
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure and Function of Caenorhabditis Elegans Leucine Aminopeptidase
To be Published
3EGC
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BU of 3egc by Molmil
Crystal structure of a putative ribose operon repressor from Burkholderia thailandensis
Descriptor: putative ribose operon repressor
Authors:Bonanno, J.B, Patskovsky, Y, Gilmore, M, Bain, K.T, Hu, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-10
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a putative ribose operon repressor from Burkholderia thailandensis
To be Published
3CRN
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BU of 3crn by Molmil
Crystal structure of response regulator receiver domain protein (CheY-like) from Methanospirillum hungatei JF-1
Descriptor: GLYCEROL, Response regulator receiver domain protein, CheY-like, ...
Authors:Hiner, R.L, Toro, R, Patskovsky, Y, Freeman, J, Chang, S, Smith, D, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-04-07
Release date:2008-04-22
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of response regulator receiver domain protein (CheY-like) from Methanospirillum hungatei JF-1.
To be Published
3D19
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BU of 3d19 by Molmil
Crystal structure of a conserved metalloprotein from Bacillus cereus
Descriptor: Conserved metalloprotein, FE (III) ION, MAGNESIUM ION
Authors:Bonanno, J.B, Patskovsky, Y, Freeman, J, Bain, K.T, Chang, S, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-05-05
Release date:2008-07-08
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a conserved metalloprotein from Bacillus cereus.
To be Published
3ICJ
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BU of 3icj by Molmil
Crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus furiosus
Descriptor: ZINC ION, uncharacterized metal-dependent hydrolase
Authors:Bonanno, J.B, Patskovsky, Y, Freeman, J, Bain, K.T, Hu, S, Ozyurt, S, Wasserman, S, Sauder, J.M, Raushel, F.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-17
Release date:2009-07-28
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of an Uncharacterized Metal-Dependent Hydrolase from Pyrococcus Furiosus
To be Published
3K51
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BU of 3k51 by Molmil
Crystal Structure of DcR3-TL1A complex
Descriptor: Decoy receptor 3, Tumor necrosis factor ligand superfamily member 15, secreted form
Authors:Zhan, C, Patskovsky, Y, Yan, Q, Li, Z, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2009-10-06
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Decoy Strategies: The Structure of TL1A:DcR3 Complex.
Structure, 19, 2011
2Q6E
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BU of 2q6e by Molmil
Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn
Descriptor: BH0493 protein, CHLORIDE ION, SODIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Toro, R, Sauder, J.M, Burley, S.K, Rauschel, F.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-06-05
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of glucuronate isomerase from Bacillus halodurans complexed with Zn.
To be Published
2Q08
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BU of 2q08 by Molmil
Crystal structure of the protein BH0493 from Bacillus halodurans C-125 complexed with ZN
Descriptor: BH0493 protein, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Patskovsky, Y, Sauder, J.M, Burley, S.K, Raushel, F, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-05-21
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Glucoronate Isomerase from Bacillus halodurans.
To be Published
2QE3
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BU of 2qe3 by Molmil
Crystal structure of human tl1a extracellular domain
Descriptor: CHLORIDE ION, TNF superfamily ligand TL1A
Authors:Zhan, C, Yan, Q, Patskovsky, Y, Shi, W, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
Deposit date:2007-06-22
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009

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