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PDB: 390 results

3DTD
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BU of 3dtd by Molmil
Crystal structure of invasion associated protein b from bartonella henselae
Descriptor: GLYCEROL, Invasion-associated protein B
Authors:Patskovsky, Y, Ozyurt, S, Freeman, J, Slocombe, A, Groshong, C, Koss, J, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-14
Release date:2008-09-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Invasion Associated Protein B from Bartonella Henselae.
To be Published
3RR1
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BU of 3rr1 by Molmil
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J
Descriptor: CHLORIDE ION, D-MALATE, Putative D-galactonate dehydratase
Authors:Patskovsky, Y, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-28
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of enolase PRK14017 from Ralstonia pickettii
To be Published
3IMH
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BU of 3imh by Molmil
CRYSTAL STRUCTURE OF GALACTOSE 1-EPIMERASE FROM Lactobacillus acidophilus NCFM
Descriptor: CHLORIDE ION, GLYCEROL, Galactose-1-epimerase, ...
Authors:Patskovsky, Y, Toro, R, Dickey, M, Chang, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-08-10
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:CRYSTAL STRUCTURE OF GALACTOSE 1-EPIMERASE FROM Lactobacillus acidophilus
To be Published
3RRA
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BU of 3rra by Molmil
Crystal structure of enolase PRK14017 (target EFI-500653) from Ralstonia pickettii 12J with magnesium bound
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative D-galactonate dehydratase
Authors:Patskovsky, Y, Ramagopal, U.A, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-04-29
Release date:2011-05-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of enolase PRK14017 from Ralstonia pickettii
To be Published
3SJN
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BU of 3sjn by Molmil
Crystal structure of enolase Spea_3858 (target EFI-500646) from Shewanella pealeana with magnesium bound
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-06-21
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Enolase Spea_3858 from Shewanella Pealeana
To be Published
3TTE
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BU of 3tte by Molmil
Crystal structure of enolase brado_4202 (target EFI-501651) from Bradyrhizobium complexed with magnesium and mandelic acid
Descriptor: (S)-MANDELIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammond, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-09-14
Release date:2011-09-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Mandelate Racemase from Bradyrhizobium Sp. Ors278
To be Published
3TOY
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BU of 3toy by Molmil
CRYSTAL STRUCTURE OF ENOLASE BRADO_4202 (TARGET EFI-501651) FROM Bradyrhizobium sp. ORS278 WITH CALCIUM AND ACETATE BOUND
Descriptor: ACETATE ION, CALCIUM ION, Mandelate racemase/muconate lactonizing enzyme family protein, ...
Authors:Patskovsky, Y, Kim, J, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammond, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-09-06
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CRYSTAL STRUCTURE OF MANDELATE RACEMASE FROM Bradyrhizobium sp. ORS278
To be Published
3Q1O
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BU of 3q1o by Molmil
Crystal structure of geranyltransferase from helicobacter pylori complexed with magnesium and isoprenyl diphosphate
Descriptor: DIMETHYLALLYL DIPHOSPHATE, Geranyltranstransferase (IspA), MAGNESIUM ION, ...
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Burley, S.K, Poulter, C.D, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-12-17
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
3RJL
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BU of 3rjl by Molmil
Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)
Descriptor: 1-pyrroline-5-carboxylate dehydrogenase, ACETATE ION, CADMIUM ION
Authors:Patskovsky, Y, Toro, R, Foti, R, Seidel, R.D, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-04-15
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of 1-Pyrroline-5-Carboxylate Dehydrogenase from Bacillus Licheniformis
To be Published
3TWB
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BU of 3twb by Molmil
Crystal structure of gluconate dehydratase (TARGET EFI-501679) from Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 complexed with magnesium and gluconic acid
Descriptor: CHLORIDE ION, D-gluconic acid, GLYCEROL, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-09-21
Release date:2011-10-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal Structure of Gluconate Dehydratase from Salmonella Enterica P125109
To be Published
3TWA
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BU of 3twa by Molmil
Crystal structure of gluconate dehydratase (TARGET EFI-501679) from Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 complexed with magnesium and glycerol
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-09-21
Release date:2011-10-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Gluconate Dehydratase from Salmonella Enterica P125109
To be Published
1M9P
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BU of 1m9p by Molmil
Crystalline Human Carbonmonoxy Hemoglobin C Exhibits The R2 Quaternary State at Neutral pH In The Presence of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Patskovska, L.N, Patskovsky, Y.V, Almo, S.C, Hirsch, R.E.
Deposit date:2002-07-29
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:COHbC and COHbS crystallize in the R2 quaternary state at neutral pH in the presence of PEG 4000.
Acta Crystallogr.,Sect.D, 61, 2005
4YS6
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BU of 4ys6 by Molmil
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE
Descriptor: CHLORIDE ION, Putative solute-binding component of ABC transporter, SODIUM ION, ...
Authors:Vetting, M.W, Patskovsky, Y, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Koss, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2015-03-16
Release date:2015-04-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE
To be published
8UTC
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BU of 8utc by Molmil
HUMAN LEUKOCYTE ANTIGEN B*07:02 IN COMPLEX WITH SARS-COV2 EPITOPE N105-113 (Y111F mutant)
Descriptor: Beta-2-microglobulin, CHLORIDE ION, HLA class I histocompatibility antigen, ...
Authors:Oltean, N, Nyovanie, S, Hashem, A, Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2023-10-30
Release date:2025-03-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:HUMAN LEUKOCYTE ANTIGEN B*07:02 IN COMPLEX WITH SARS-COV2 EPITOPE N105-113 (Y111F mutant)
To Be Published
5E83
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BU of 5e83 by Molmil
CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN S (LIGANDED SICKLE CELL HEMOGLOBIN) COMPLEXED WITH GBT440, CO-CRYSTALLIZATION EXPERIMENT
Descriptor: 2-methyl-3-({2-[1-(propan-2-yl)-1H-pyrazol-5-yl]pyridin-3-yl}methoxy)phenol, CARBON MONOXIDE, GLYCEROL, ...
Authors:Patskovska, L, Patskovsky, Y, Bonanno, J.B, Almo, S.C.
Deposit date:2015-10-13
Release date:2016-07-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:GBT440 increases haemoglobin oxygen affinity, reduces sickling and prolongs RBC half-life in a murine model of sickle cell disease.
Br.J.Haematol., 175, 2016
4YV7
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BU of 4yv7 by Molmil
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEI_3018, TARGET EFI-511327) WITH BOUND GLYCEROL
Descriptor: GLYCEROL, Periplasmic binding protein/LacI transcriptional regulator
Authors:Vetting, M.W, Patskovsky, Y, Al Obaidi, N.F, Toro, R, Morisco, L.L, Benach, J, Koss, J, Wasserman, S.R, Attonito, J.D, Scott Glenn, A, Chamala, S, Chowdhury, S, Lafleur, J, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2015-03-19
Release date:2015-04-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEI_3018, TARGET EFI-511327) WITH BOUND GLYCEROL
To be published
1NEJ
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BU of 1nej by Molmil
Crystalline Human Carbonmonoxy Hemoglobin S (Liganded Sickle Cell Hemoglobin) Exhibits The R2 Quaternary State At Neutral pH In The Presence Of Polyethylene Glycol: The 2.1 Angstrom Resolution Crystal Structure
Descriptor: CARBON MONOXIDE, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Patskovska, L.N, Patskovsky, Y.V, Almo, S.C, Hirsch, R.E.
Deposit date:2002-12-11
Release date:2003-12-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:COHbC and COHbS crystallize in the R2 quaternary state at neutral pH in the presence of PEG 4000.
Acta Crystallogr.,Sect.D, 61, 2005
8VCG
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BU of 8vcg by Molmil
Mutant Src SH2 domain in complex with phosphotyrosine
Descriptor: Isoform 3 of Proto-oncogene tyrosine-protein kinase Src, O-PHOSPHOTYROSINE
Authors:Hashem, A, Nyovanie, S, Oltean, N, Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2023-12-14
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Engineered Mutant Src Sh2 Domain
To Be Published
8VCF
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BU of 8vcf by Molmil
Crystal structure of Superbinder Src SH2 domain with Cysteine to Serine mutations
Descriptor: Isoform 3 of Proto-oncogene tyrosine-protein kinase Src
Authors:Hashem, A, Nyovanie, S, Patskovsky, Y, Oltean, N, Krogsgaard, M.
Deposit date:2023-12-14
Release date:2025-01-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Engineered Mutant Src Sh2 Domain
To Be Published
8V8Q
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BU of 8v8q by Molmil
HUMAN LEUKOCYTE ANTIGEN B*07:02 IN COMPLEX WITH MERS-COV EPITOPE N95-103 (A95S mutant)
Descriptor: BICARBONATE ION, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Oltean, N, Nyovanie, S, Hashem, A, Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2023-12-05
Release date:2025-03-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:HUMAN LEUKOCYTE ANTIGEN B*07:02 IN COMPLEX WITH MERS-CoV EPITOPE N95-103 (A95S mutant)
To Be Published
4FHQ
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BU of 4fhq by Molmil
Crystal Structure of HVEM
Descriptor: Tumor necrosis factor receptor superfamily member 14
Authors:Liu, W, Zhan, C, Patskovsky, Y, Bhosle, R.C, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-06-06
Release date:2012-07-18
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.251 Å)
Cite:Increased Heterologous Protein Expression in Drosophila S2 Cells for Massive Production of Immune Ligands/Receptors and Structural Analysis of Human HVEM.
Mol Biotechnol, 57, 2015
7MKB
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BU of 7mkb by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV-2 epitope YLQPRTFLL
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Nyovanie, S.T, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-04-22
Release date:2021-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV-2 epitope YLQPRTFLL
To be Published
7LG3
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BU of 7lg3 by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
To Be Published
7LG0
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BU of 7lg0 by Molmil
Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
Descriptor: Beta-2-microglobulin, HEXAETHYLENE GLYCOL, HLA class I histocompatibility antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
To Be Published
7LFZ
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BU of 7lfz by Molmil
Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope IPRRNVATL
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope IPRRNVATL
To Be Published

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