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PDB: 339 results

4ZEW
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BU of 4zew by Molmil
Crystal structure of PfHAD1 in complex with glucose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2015-04-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4ZEX
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BU of 4zex by Molmil
Crystal structure of PfHAD1 in complex with glyceraldehyde-3-phosphate
Descriptor: GLYCERALDEHYDE-3-PHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2015-04-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
7SVU
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BU of 7svu by Molmil
TnsBctd-TnsC-TniQ complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (28-MER), DNA (29-MER), ...
Authors:Park, J, Tsai, A.W.T, Kellogg, E.H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the holo CRISPR RNA-guided transposon integration complex
Nature, 613, 2023
6IQ6
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BU of 6iq6 by Molmil
Crystal structure of GAPDH
Descriptor: (2Z)-4-methoxy-4-oxobut-2-enoic acid, Glyceraldehyde-3-phosphate dehydrogenase
Authors:Park, J.B, Park, H.Y.
Deposit date:2018-11-06
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural Study of Monomethyl Fumarate-Bound Human GAPDH.
Mol.Cells, 42, 2019
5H61
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BU of 5h61 by Molmil
Structure of Transferase mutant-C23S,C199S
Descriptor: Transferase
Authors:Park, J.B, Yoo, Y, Kim, J.
Deposit date:2016-11-10
Release date:2017-12-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H63
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BU of 5h63 by Molmil
Structure of Transferase mutant-C23S,C199S
Descriptor: MANGANESE (II) ION, Transferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Park, J.B, Yoo, Y, Kim, J.
Deposit date:2016-11-10
Release date:2017-12-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
4ZEV
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BU of 4zev by Molmil
Crystal structure of PfHAD1 in complex with mannose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2015-04-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
8ISA
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BU of 8isa by Molmil
CrtMLIKE with one GsPP molecule
Descriptor: CrtM, GERANYL S-THIOLODIPHOSPHATE
Authors:Park, J.Y.
Deposit date:2023-03-20
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:CrtMLIKE with one GsPP molecule
To Be Published
8IS7
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BU of 8is7 by Molmil
CrtMLIKE with two FsPP molecules.
Descriptor: CrtM, MAGNESIUM ION, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE
Authors:Park, J.Y.
Deposit date:2023-03-20
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CrtMLIKE with two FsPP molecules.
To Be Published
8IS9
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BU of 8is9 by Molmil
CrtMLIKE with one FsPP molecule
Descriptor: CrtM, MAGNESIUM ION, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE
Authors:Park, J.Y.
Deposit date:2023-03-20
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:CrtMLIKE with one FsPP molecule
To Be Published
8IS8
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BU of 8is8 by Molmil
CrtMLIKE with two GsPP molecules
Descriptor: CrtM, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION
Authors:Park, J.y.
Deposit date:2023-03-20
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:CrtMLIKE with two GsPP molecules
To Be Published
5H62
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BU of 5h62 by Molmil
Structure of Transferase mutant-C23S,C199S
Descriptor: 1,2-ETHANEDIOL, MANGANESE (II) ION, Transferase, ...
Authors:Park, J.B, Yoo, Y, Kim, J.
Deposit date:2016-11-10
Release date:2017-12-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
7M99
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BU of 7m99 by Molmil
ATPgS bound TnsC filament from ShCAST system
Descriptor: DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ...
Authors:Park, J, Tsai, A.W.L, Mehrotra, E, Kellogg, E.H.
Deposit date:2021-03-30
Release date:2021-07-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for target site selection in RNA-guided DNA transposition systems.
Science, 373, 2021
8IS6
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BU of 8is6 by Molmil
Apo-CrtMLIKE
Descriptor: CrtM
Authors:Park, J.Y.
Deposit date:2023-03-20
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:CrtMKLIKE Apo structure
To Be Published
6K8C
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BU of 6k8c by Molmil
Crystal structure of Helicobacter pylori folylpolyglutamate synthetase
Descriptor: CITRIC ACID, Folylpolyglutamate synthase (FolC), GLYCEROL
Authors:Park, J.S, Han, B.W.
Deposit date:2019-06-11
Release date:2019-11-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95174968 Å)
Cite:Structural Analyses of Helicobacter Pylori FolC Conducting Glutamation in Folate Metabolism.
Crystals, 2019
4J4Q
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BU of 4j4q by Molmil
Crystal structure of active conformation of GPCR opsin stabilized by octylglucoside
Descriptor: ACETATE ION, Guanine nucleotide-binding protein G(t) subunit alpha-1, PALMITIC ACID, ...
Authors:Park, J.H, Morizumi, T, Li, Y, Hong, J.E, Pai, E.F, Hofmann, K.P, Choe, H.W, Ernst, O.P.
Deposit date:2013-02-07
Release date:2013-10-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Opsin, a structural model for olfactory receptors?
Angew.Chem.Int.Ed.Engl., 52, 2013
4JVJ
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BU of 4jvj by Molmil
Crystal structure of human FPPS in complex with magnesium, CL01131, and sulfate
Descriptor: ({[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methanediyl)bis(phosphonic acid), Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
Authors:Park, J, Leung, C.-Y, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2013-03-25
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Thienopyrimidine Bisphosphonate (ThPBP) Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Optimization and Characterization of the Mode of Inhibition.
J.Med.Chem., 56, 2013
7V5C
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BU of 7v5c by Molmil
Cryo-EM structure of the mouse ABCB9 (ADP.BeF3-bound)
Descriptor: ABC-type oligopeptide transporter ABCB9, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
Deposit date:2021-08-17
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7VFI
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BU of 7vfi by Molmil
Cryo-EM structure of the mouse TAPL (9mer-peptide bound)
Descriptor: ABC-type oligopeptide transporter ABCB9, ARG-ARG-TYR-GLN-LYS-SER-THR-GLU-LEU, CHOLESTEROL HEMISUCCINATE
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Kim, J.W, Ju, S, Min, D.S, Jin, M.S.
Deposit date:2021-09-13
Release date:2022-10-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
7V5D
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BU of 7v5d by Molmil
Cryo-EM structure of the mouse ABCB9 (PG-bound)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, ABC-type oligopeptide transporter ABCB9
Authors:Park, J.G, Kim, S, Jang, E, Choi, S.H, Han, H, Ju, S, Kim, J.W, Min, D.S, Jin, M.S.
Deposit date:2021-08-17
Release date:2022-10-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The lysosomal transporter TAPL has a dual role as peptide translocator and phosphatidylserine floppase.
Nat Commun, 13, 2022
4L2X
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BU of 4l2x by Molmil
Crystal structure of human FPPS in complex with magnesium, CL02134, and inorganic pyrophosphate
Descriptor: ({[6-(4-cyclopropylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methanediyl)bis(phosphonic acid), Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
Authors:Park, J, Leung, C.-Y, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2013-06-04
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Thienopyrimidine Bisphosphonate (ThPBP) Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Optimization and Characterization of the Mode of Inhibition.
J.Med.Chem., 56, 2013
3QWZ
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BU of 3qwz by Molmil
Crystal structure of FAF1 UBX-p97N-domain complex
Descriptor: FAS-associated factor 1, Transitional endoplasmic reticulum ATPase
Authors:Park, J.K, Jeon, H, Lee, J.J, Kim, K.H, Lee, K.J, Kim, E.E.
Deposit date:2011-02-28
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dissection of the interaction between FAF1 UBX and p97
To be Published
3QX1
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BU of 3qx1 by Molmil
Crystal structure of FAF1 UBX domain
Descriptor: FAS-associated factor 1, SULFATE ION
Authors:Park, J.K, Jeon, H, Lee, J.J, Kim, K.H, Lee, K.J, Kim, E.E.
Deposit date:2011-03-01
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Dissection of the interaction between FAF1 UBX and p97
To be Published
7VGM
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BU of 7vgm by Molmil
Crystal structure of Phenylalanine hydroxylase from Bacillus cereus ATCC 14579
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Park, J, Kim, K.-J.
Deposit date:2021-09-17
Release date:2022-04-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural studies of a novel auxiliary-domain-containing phenylalanine hydroxylase from Bacillus cereus ATCC 14579.
Acta Crystallogr D Struct Biol, 78, 2022
4LPG
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BU of 4lpg by Molmil
Crystal structure of human FPPS in complex with CL01131
Descriptor: ({[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methanediyl)bis(phosphonic acid), Farnesyl pyrophosphate synthase, PHOSPHATE ION
Authors:Park, J, Leung, C.Y, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2013-07-16
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Multistage screening reveals chameleon ligands of the human farnesyl pyrophosphate synthase: implications to drug discovery for neurodegenerative diseases.
J.Med.Chem., 57, 2014

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PDB entries from 2024-11-06

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