2D60
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![BU of 2d60 by Molmil](/molmil-images/mine/2d60) | Crystal structure of deoxy human hemoglobin complexed with two L35 molecules | 分子名称: | 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, Hemoglobin alpha subunit, Hemoglobin beta subunit, ... | 著者 | Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R. | 登録日 | 2005-11-08 | 公開日 | 2006-03-07 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35 J.Mol.Biol., 356, 2006
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2D5X
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![BU of 2d5x by Molmil](/molmil-images/mine/2d5x) | Crystal structure of carbonmonoxy horse hemoglobin complexed with L35 | 分子名称: | 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, CARBON MONOXIDE, Hemoglobin alpha subunit, ... | 著者 | Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R. | 登録日 | 2005-11-08 | 公開日 | 2006-03-07 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35 J.Mol.Biol., 356, 2006
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1IZO
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![BU of 1izo by Molmil](/molmil-images/mine/1izo) | Cytochrome P450 BS beta Complexed with Fatty Acid | 分子名称: | Cytochrome P450 152A1, PALMITOLEIC ACID, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Lee, D.S, Yamada, A, Sugimoto, H, Matsunaga, I, Ogura, H, Ichihara, K, Adachi, S, Park, S.Y, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-10-10 | 公開日 | 2003-03-18 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Substrate Recognition and Molecular Mechanism of Fatty Acid Hydroxylation by Cytochrome P450 from Bacillus subtilis. CRYSTALLOGRAPHIC, SPECTROSCOPIC, AND MUTATIONAL STUDIES. J.Biol.Chem., 278, 2003
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2EB4
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![BU of 2eb4 by Molmil](/molmil-images/mine/2eb4) | Crystal structure of apo-HpcG | 分子名称: | 2-oxo-hept-3-ene-1,7-dioate hydratase, SODIUM ION, THIOCYANATE ION | 著者 | Izumi, A, Rea, D, Adachi, T, Unzai, S, Park, S.Y, Roper, D.I, Tame, J.R.H. | 登録日 | 2007-02-07 | 公開日 | 2007-07-17 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli J.Mol.Biol., 370, 2007
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3S65
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![BU of 3s65 by Molmil](/molmil-images/mine/3s65) | |
2EB5
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![BU of 2eb5 by Molmil](/molmil-images/mine/2eb5) | Crystal structure of HpcG complexed with oxalate | 分子名称: | 2-oxo-hept-3-ene-1,7-dioate hydratase, MAGNESIUM ION, OXALATE ION, ... | 著者 | Izumi, A, Rea, D, Adachi, T, Unzai, S, Park, S.Y, Roper, D.I, Tame, J.R.H. | 登録日 | 2007-02-07 | 公開日 | 2007-07-17 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli J.Mol.Biol., 370, 2007
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3S66
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2EB6
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![BU of 2eb6 by Molmil](/molmil-images/mine/2eb6) | Crystal structure of HpcG complexed with Mg ion | 分子名称: | 2-oxo-hept-3-ene-1,7-dioate hydratase, MAGNESIUM ION | 著者 | Izumi, A, Rea, D, Adachi, T, Unzai, S, Park, S.Y, Roper, D.I, Tame, J.R.H. | 登録日 | 2007-02-07 | 公開日 | 2007-07-17 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.69 Å) | 主引用文献 | Structure and Mechanism of HpcG, a Hydratase in the Homoprotocatechuate Degradation Pathway of Escherichia coli J.Mol.Biol., 370, 2007
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2EXS
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![BU of 2exs by Molmil](/molmil-images/mine/2exs) | TRAP3 (engineered TRAP) | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | 著者 | Heddle, J.G, Yokoyama, T, Yamashita, I, Park, S.Y, Tame, J.R.H. | 登録日 | 2005-11-08 | 公開日 | 2006-08-01 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Rounding up: Engineering 12-Membered Rings from the Cyclic 11-Mer TRAP Structure, 14, 2006
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2F9Z
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![BU of 2f9z by Molmil](/molmil-images/mine/2f9z) | Complex between the chemotaxis deamidase CheD and the chemotaxis phosphatase CheC from Thermotoga maritima | 分子名称: | PROTEIN (chemotaxis methylation protein), chemotaxis protein CheC | 著者 | Chao, X, Park, S.Y, Bilwes, A.M, Crane, B.R. | 登録日 | 2005-12-06 | 公開日 | 2006-06-06 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | A receptor-modifying deamidase in complex with a signaling phosphatase reveals reciprocal regulation. Cell(Cambridge,Mass.), 124, 2006
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2D5Z
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![BU of 2d5z by Molmil](/molmil-images/mine/2d5z) | Crystal structure of T-state human hemoglobin complexed with three L35 molecules | 分子名称: | 2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID, Hemoglobin alpha subunit, Hemoglobin beta subunit, ... | 著者 | Yokoyama, T, Neya, S, Tsuneshige, A, Yonetani, T, Park, S.Y, Tame, J.R. | 登録日 | 2005-11-08 | 公開日 | 2006-03-07 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35 J.Mol.Biol., 356, 2006
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2EXT
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![BU of 2ext by Molmil](/molmil-images/mine/2ext) | TRAP4 (engineered TRAP) | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | 著者 | Heddle, J.G, Yokoyama, T, Yamashita, I, Park, S.Y, Tame, J.R.H. | 登録日 | 2005-11-08 | 公開日 | 2006-08-01 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Rounding up: Engineering 12-Membered Rings from the Cyclic 11-Mer TRAP Structure, 14, 2006
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2ZD0
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![BU of 2zd0 by Molmil](/molmil-images/mine/2zd0) | Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP) | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | 著者 | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | 登録日 | 2007-11-15 | 公開日 | 2008-04-29 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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2ZP8
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![BU of 2zp8 by Molmil](/molmil-images/mine/2zp8) | The Nature of the TRAP:Anti-TRAP complex | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | 著者 | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | 登録日 | 2008-07-08 | 公開日 | 2009-02-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZCZ
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![BU of 2zcz by Molmil](/molmil-images/mine/2zcz) | Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | 著者 | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | 登録日 | 2007-11-15 | 公開日 | 2008-04-29 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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2ZP9
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![BU of 2zp9 by Molmil](/molmil-images/mine/2zp9) | The Nature of the TRAP:Anti-TRAP complex | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | 著者 | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | 登録日 | 2008-07-08 | 公開日 | 2009-02-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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7C06
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![BU of 7c06 by Molmil](/molmil-images/mine/7c06) | Crystal structure of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU. | 分子名称: | RNA (5'-R(*U*UP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ... | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | 登録日 | 2020-04-30 | 公開日 | 2020-09-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.02 Å) | 主引用文献 | Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1. Nat Commun, 11, 2020
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7C08
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![BU of 7c08 by Molmil](/molmil-images/mine/7c08) | Crystal structure of S34Y mutant of yeast U2AF1 complex bound to 3' splice site RNA, 5'-UAGGU. | 分子名称: | RNA (5'-R(*U*UP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ... | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | 登録日 | 2020-04-30 | 公開日 | 2020-09-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.35 Å) | 主引用文献 | Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1. Nat Commun, 11, 2020
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7C07
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![BU of 7c07 by Molmil](/molmil-images/mine/7c07) | Crystal structure of yeast U2AF1 complex bound to 5'-AAGGU RNA. | 分子名称: | RNA (5'-R(*U*AP*AP*GP*GP*U)-3'), Splicing factor U2AF 23 kDa subunit, Splicing factor U2AF 59 kDa subunit, ... | 著者 | Yoshida, H, Park, S.Y, Urano, T, Obayashi, E. | 登録日 | 2020-04-30 | 公開日 | 2020-09-30 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Elucidation of the aberrant 3' splice site selection by cancer-associated mutations on the U2AF1. Nat Commun, 11, 2020
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7XBD
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![BU of 7xbd by Molmil](/molmil-images/mine/7xbd) | Cryo-EM structure of human galanin receptor 2 | 分子名称: | Galanin, Galanin receptor type 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... | 著者 | Ishimoto, N, Kita, S, Park, S.Y. | 登録日 | 2022-03-21 | 公開日 | 2022-07-13 | 最終更新日 | 2022-08-10 | 実験手法 | ELECTRON MICROSCOPY (3.11 Å) | 主引用文献 | Structure of the human galanin receptor 2 bound to galanin and Gq reveals the basis of ligand specificity and how binding affects the G-protein interface. Plos Biol., 20, 2022
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5GSE
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![BU of 5gse by Molmil](/molmil-images/mine/5gse) | Crystal structure of unusual nucleosome | 分子名称: | DNA (250-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... | 著者 | Kato, D, Osakabe, A, Arimura, Y, Park, S.Y, Kurumizaka, H. | 登録日 | 2016-08-16 | 公開日 | 2017-05-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.14 Å) | 主引用文献 | Crystal structure of the overlapping dinucleosome composed of hexasome and octasome Science, 356, 2017
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5H34
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![BU of 5h34 by Molmil](/molmil-images/mine/5h34) | Crystal structure of the C-terminal domain of methionyl-tRNA synthetase (MetRS-C) in Nanoarchaeum equitans | 分子名称: | Methionine-tRNA ligase | 著者 | Suzuki, H, Kaneko, A, Yamamoto, T, Nambo, M, Umehara, T, Yoshida, H, Park, S.Y, Tamura, K. | 登録日 | 2016-10-20 | 公開日 | 2017-06-21 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.748 Å) | 主引用文献 | Binding Properties of Split tRNA to the C-terminal Domain of Methionyl-tRNA Synthetase of Nanoarchaeum equitans. J. Mol. Evol., 84, 2017
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5GUS
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![BU of 5gus by Molmil](/molmil-images/mine/5gus) | Crystal structure of ASCH domain from Zymomonas mobilis | 分子名称: | 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, Helix-turn-helix domain-containing protein, ... | 著者 | Ha, S.C, Park, S.Y, Kim, J.S. | 登録日 | 2016-08-31 | 公開日 | 2017-08-30 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.951 Å) | 主引用文献 | Crystal structure of an ASCH protein from Zymomonas mobilis and its ribonuclease activity specific for single-stranded RNA. Sci Rep, 7, 2017
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5GUQ
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1IW0
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![BU of 1iw0 by Molmil](/molmil-images/mine/1iw0) | Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferric state | 分子名称: | Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... | 著者 | Hirotsu, S, Unno, M, Chu, G.C, Lee, D.S, Park, S.Y, Shiro, Y, Ikeda-Saito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-04-04 | 公開日 | 2003-04-08 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae. J.Biol.Chem., 279, 2004
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