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PDB: 264 results

6OON
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BU of 6oon by Molmil
Human Argonaute4 bound to guide RNA
Descriptor: Protein argonaute-4, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*UP*U)-3')
Authors:Park, M.S, Brackbill, J.A, Nakanishi, K.
Deposit date:2019-04-23
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Multidomain Convergence of Argonaute during RISC Assembly Correlates with the Formation of Internal Water Clusters.
Mol.Cell, 75, 2019
5VM9
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BU of 5vm9 by Molmil
Human Argonaute3 bound to guide RNA
Descriptor: Protein argonaute-3, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*UP*U)-3'), RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*UP*U)-3')
Authors:Park, M.S, Nakanishi, K.
Deposit date:2017-04-26
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Human Argonaute3 has slicer activity.
Nucleic Acids Res., 45, 2017
6KGJ
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BU of 6kgj by Molmil
M1Q-hNTAQ1 C28S
Descriptor: Protein N-terminal glutamine amidohydrolase
Authors:Park, M.R, Kim, L, Kwon, D.H, Song, H.K.
Deposit date:2019-07-11
Release date:2020-01-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Use of the LC3B-fusion technique for biochemical and structural studies of proteins involved in the N-degron pathway.
J.Biol.Chem., 295, 2020
5JKQ
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BU of 5jkq by Molmil
Crystal structure of Plasmodium falciparum Pf3D7_0606800 (PfVFT1)
Descriptor: PfVFT1, SULFATE ION
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2016-04-26
Release date:2017-07-19
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of Plasmodium falciparum 3D7_0606800 reveals a bi-lobed architecture that supports re-annotation as a Venus Flytrap protein.
Protein Sci., 26, 2017
5JK2
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BU of 5jk2 by Molmil
Crystal structure of Treponema pallidum Tp0751 (Pallilysin)
Descriptor: Tp0751
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2016-04-25
Release date:2016-10-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Structure of Treponema pallidum Tp0751 (Pallilysin) Reveals a Non-canonical Lipocalin Fold That Mediates Adhesion to Extracellular Matrix Components and Interactions with Host Cells.
Plos Pathog., 12, 2016
5JIR
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BU of 5jir by Molmil
Crystal structure of Treponema pallidum protein Tp0624
Descriptor: CHLORIDE ION, GLYCEROL, OOP family OmpA-OmpF porin
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2016-04-22
Release date:2016-11-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Structure of Treponema pallidum Tp0624 Reveals a Modular Assembly of Divergently Functionalized and Previously Uncharacterized Domains.
Plos One, 11, 2016
6BXR
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BU of 6bxr by Molmil
Crystal structure of Toxoplasma gondii Mitochondrial Association Factor 1 B (MAF1B)
Descriptor: BROMIDE ION, GLYCEROL, Mitochondrial association factor 1, ...
Authors:Parker, M.L, Ramaswamy, R, Boulanger, M.J.
Deposit date:2017-12-18
Release date:2018-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Toxoplasma gondii locus required for the direct manipulation of host mitochondria has maintained multiple ancestral functions.
Mol. Microbiol., 108, 2018
6BXW
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BU of 6bxw by Molmil
Crystal structure of Toxoplasma gondii Mitochondrial Association Factor 1 B (MAF1B) in complex with ADPribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Mitochondrial association factor 1
Authors:Parker, M.L, Ramaswamy, R, Boulanger, M.J.
Deposit date:2017-12-19
Release date:2018-12-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Toxoplasma gondii locus required for the direct manipulation of host mitochondria has maintained multiple ancestral functions.
Mol. Microbiol., 108, 2018
6BXT
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BU of 6bxt by Molmil
Crystal structure of Toxoplasma gondii Mitochondrial Association Factor 1 A (MAF1A) in complex with ADPribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, mitochondrial association factor 1
Authors:Parker, M.L, Ramaswamy, R, Boulanger, M.J.
Deposit date:2017-12-18
Release date:2018-12-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Toxoplasma gondii locus required for the direct manipulation of host mitochondria has maintained multiple ancestral functions.
Mol. Microbiol., 108, 2018
4YS4
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BU of 4ys4 by Molmil
Crystal structure of Pf41 tandem 6-cys domains from Plasmodium falciparum
Descriptor: CHLORIDE ION, GLYCEROL, Merozoite surface protein P41, ...
Authors:Parker, M.L, Peng, F, Boulanger, M.J.
Deposit date:2015-03-16
Release date:2015-10-14
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Structure of Plasmodium falciparum Blood-Stage 6-Cys Protein Pf41 Reveals an Unexpected Intra-Domain Insertion Required for Pf12 Coordination.
Plos One, 10, 2015
4YIZ
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BU of 4yiz by Molmil
Crystal structure of engineered TgAMA1 lacking the DII loop in complex with an Eimeria tenella RON2D3 peptide
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Apical membrane antigen AMA1, ...
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2015-03-02
Release date:2015-05-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An Extended Surface Loop on Toxoplasma gondii Apical Membrane Antigen 1 (AMA1) Governs Ligand Binding Selectivity.
Plos One, 10, 2015
4Z81
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BU of 4z81 by Molmil
Crystal structure of AMA4 DI-DII-EGF1 from Toxoplasma gondii
Descriptor: EGF family domain-containing protein, GLYCEROL
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2015-04-08
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Dissecting the interface between apicomplexan parasite and host cell: Insights from a divergent AMA-RON2 pair.
Proc.Natl.Acad.Sci.USA, 113, 2016
4Z80
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BU of 4z80 by Molmil
Crystal structure of Toxoplasma gondii AMA4 DI-DII-EGF1 in complex with a 33 aa TgRON2L1 peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytoadherence-linked asexual protein, EGF family domain-containing protein, ...
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2015-04-08
Release date:2015-12-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Dissecting the interface between apicomplexan parasite and host cell: Insights from a divergent AMA-RON2 pair.
Proc.Natl.Acad.Sci.USA, 113, 2016
5WA2
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BU of 5wa2 by Molmil
Crystal structure of Toxoplasma gondii SAG3 (SRS57)
Descriptor: GLYCEROL, Surface antigen
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2017-06-24
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:A Toxoplasma lectin-specific activity for sulfated proteoglycans thought to promote infection competency is not dependent on TgSRS57 (TgSAG3)
To be published
4C83
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BU of 4c83 by Molmil
Crystal Structure of the IgG2a LPT3 in complex with an 8-sugar inner core analogue of Neisseria meningitidis
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-L-glycero-alpha-D-manno-heptopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]L-glycero-alpha-D-manno-heptopyranose-(1-5)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, LPT3 HEAVY CHAIN, LPT3 LIGHT CHAIN, ...
Authors:Parker, M.J, Gomery, K, Richard, G, Mackenzie, C.R, Cox, A.D, Richards, J.C, Evans, S.V.
Deposit date:2013-09-29
Release date:2014-02-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural Basis for Selective Cross-Reactivity in a Bactericidal Antibody Against Inner Core Lipooligosaccharide from Neisseria Meningitidis.
Glycobiology, 24, 2014
4YIV
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BU of 4yiv by Molmil
Crystal structure of engineered TgAMA1 lacking the DII loop
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Apical membrane antigen AMA1, CADMIUM ION, ...
Authors:Parker, M.L, Boulanger, M.J.
Deposit date:2015-03-02
Release date:2015-05-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:An Extended Surface Loop on Toxoplasma gondii Apical Membrane Antigen 1 (AMA1) Governs Ligand Binding Selectivity.
Plos One, 10, 2015
4ZGH
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BU of 4zgh by Molmil
Structure of Sugar Binding Protein Pneumolysin
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GOLD (I) CYANIDE ION, ...
Authors:Parker, M.W, Feil, S.C, Morton, C.
Deposit date:2015-04-23
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Streptococcus pneumoniae pneumolysin provides key insights into early steps of pore formation.
Sci Rep, 5, 2015
4NKQ
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BU of 4nkq by Molmil
Structure of a Cytokine Receptor Complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytokine receptor common subunit beta, Granulocyte-macrophage colony-stimulating factor, ...
Authors:Parker, M.W, Broughton, S.E.
Deposit date:2013-11-13
Release date:2015-09-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Conformational Changes in the GM-CSF Receptor Suggest a Molecular Mechanism for Affinity Conversion and Receptor Signaling.
Structure, 24, 2016
4QDQ
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BU of 4qdq by Molmil
Physical basis for Nrp2 ligand binding
Descriptor: GLYCEROL, Neuropilin-2, SULFATE ION
Authors:Parker, M.W, Vander Kooi, C.W.
Deposit date:2014-05-14
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4QDS
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BU of 4qds by Molmil
Physical basis for Nrp2 ligand binding
Descriptor: ACETATE ION, GLYCEROL, Neuropilin-2
Authors:Parker, M.W, Vander Kooi, C.W.
Deposit date:2014-05-14
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4QDR
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BU of 4qdr by Molmil
Physical basis for Nrp2 ligand binding
Descriptor: Neuropilin-2
Authors:Parker, M.W, Vander Kooi, C.W.
Deposit date:2014-05-14
Release date:2015-04-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
1Z52
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BU of 1z52 by Molmil
Proaerolysin Mutant W373L
Descriptor: Aerolysin
Authors:Parker, M.W, Feil, S.C, Tang, J.W.
Deposit date:2005-03-16
Release date:2006-03-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of Proaerolysin at 2.3 A Resolution and Structural Analyses of Single-site Mutants as a Basis for Understanding Membrane Insertion of the Toxin
To be Published
5DIM
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BU of 5dim by Molmil
Mutant toxin in 'native' space group
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Perfringolysin O
Authors:Parker, M.W, Gorman, M.A, Lawrence, S.L.
Deposit date:2015-09-01
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Structure of mutant toxin at 3.32 Angstrom resolution
To Be Published
5DHL
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BU of 5dhl by Molmil
Crystal structure of Toxin, mutant N197W
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Perfringolysin O
Authors:Parker, M.W, Gorman, M.A, Lawrence, S.L.
Deposit date:2015-08-31
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structure of mutant toxin
To Be Published
1COL
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BU of 1col by Molmil
REFINED STRUCTURE OF THE PORE-FORMING DOMAIN OF COLICIN A AT 2.4 ANGSTROMS RESOLUTION
Descriptor: COLICIN A
Authors:Parker, M.W, Postma, J.P.M, Pattus, F, Tucker, A.D, Tsernoglou, D.
Deposit date:1991-07-06
Release date:1992-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Refined structure of the pore-forming domain of colicin A at 2.4 A resolution.
J.Mol.Biol., 224, 1992

226707

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