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PDB: 20 件
6IQ6
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BU of 6iq6 by Molmil
Crystal structure of GAPDH
分子名称: (2Z)-4-methoxy-4-oxobut-2-enoic acid, Glyceraldehyde-3-phosphate dehydrogenase
著者Park, J.B, Park, H.Y.
登録日2018-11-06
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural Study of Monomethyl Fumarate-Bound Human GAPDH.
Mol.Cells, 42, 2019
5XYK
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BU of 5xyk by Molmil
Structure of Transferase
分子名称: ARGININE, MANGANESE (II) ION, Putative cytoplasmic protein, ...
著者Park, J.B, Yoo, Y, Kim, J, Cho, H.S.
登録日2017-07-09
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structure of Transferase
To Be Published
5H5Y
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BU of 5h5y by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: Non-LEE encoded effector protein NleB
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H63
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BU of 5h63 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: MANGANESE (II) ION, Transferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H61
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BU of 5h61 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: Transferase
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
6JQQ
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BU of 6jqq by Molmil
KatE H392C from Escherichia coli
分子名称: 1,2-ETHANEDIOL, Catalase, PROTOPORPHYRIN IX CONTAINING FE
著者Park, J.B, Cho, H.-S.
登録日2019-04-01
公開日2020-04-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献KatE H392C from Escherichia coli
To Be Published
5H62
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BU of 5h62 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, Transferase, ...
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
5H60
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BU of 5h60 by Molmil
Structure of Transferase mutant-C23S,C199S
分子名称: MANGANESE (II) ION, Transferase, URIDINE-5'-DIPHOSPHATE
著者Park, J.B, Yoo, Y, Kim, J.
登録日2016-11-10
公開日2017-12-20
最終更新日2018-10-31
実験手法X-RAY DIFFRACTION (3.64 Å)
主引用文献Structural basis for arginine glycosylation of host substrates by bacterial effector proteins.
Nat Commun, 9, 2018
6AI4
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BU of 6ai4 by Molmil
Structure of Transferase mutant-C21S,C199S
分子名称: Non-LEE encoded effector protein NleB
著者Park, J.B, Yoo, Y, Kim, J.
登録日2018-08-21
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Transferase mutant-C21S,C199S
To Be Published
1ZRP
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BU of 1zrp by Molmil
SOLUTION-STATE STRUCTURE BY NMR OF ZINC-SUBSTITUTED RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
分子名称: RUBREDOXIN, ZINC ION
著者Blake, P.R, Park, J.B, Zhou, Z.H, Hare, D.R, Adams, M.W.W, Summers, M.F.
登録日1992-07-10
公開日1993-10-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution-state structure by NMR of zinc-substituted rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
6LFK
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BU of 6lfk by Molmil
Crystal structure of KatE from atypical E. coli
分子名称: PROTOPORPHYRIN IX CONTAINING FE, eKatE catalase
著者Cho, H.S, Yoo, Y, Park, J.B.
登録日2019-12-03
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of eKatE
To Be Published
1CAD
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BU of 1cad by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
分子名称: FE (III) ION, RUBREDOXIN
著者Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
登録日1992-05-18
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1CAA
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BU of 1caa by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
分子名称: FE (III) ION, RUBREDOXIN
著者Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
登録日1992-05-18
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
7YM5
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BU of 7ym5 by Molmil
Crystal structure of the Salmonella effector SseK1
分子名称: MANGANESE (II) ION, Type III secretion system effector arginine glycosyltransferase SseK1, URIDINE-5'-DIPHOSPHATE
著者Kim, U.J, Park, J.B, Yoo, Y, Cho, H.S.
登録日2022-07-27
公開日2023-08-02
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Catalytic DxD motif caged in Asx-turn and Met-aromatic interaction attenuates the pathogenic glycosylation of SseK2/NleB2 effectors.
Sci Rep, 12, 2022
7YM7
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BU of 7ym7 by Molmil
Crystal structure of the Salmonella effector SseK1 F187A mutant
分子名称: Type III secretion system effector arginine glycosyltransferase SseK1
著者Kim, U.J, Park, J.B, Yoo, Y, Cho, H.S.
登録日2022-07-27
公開日2023-08-02
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Catalytic DxD motif caged in Asx-turn and Met-aromatic interaction attenuates the pathogenic glycosylation of SseK2/NleB2 effectors.
Sci Rep, 12, 2022
1OZN
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BU of 1ozn by Molmil
1.5A Crystal Structure of the Nogo Receptor Ligand Binding Domain Reveals a Convergent Recognition Scaffold Mediating Inhibition of Myelination
分子名称: ACETIC ACID, Reticulon 4 receptor, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者He, X, Bazan, J.F, Park, J.B, McDermott, G, He, Z, Garcia, K.C.
登録日2003-04-09
公開日2003-05-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structure of the Nogo Receptor Ectodomain. A Recognition module implicated in Myelin Inhibition.
Neuron, 38, 2003
3FCK
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BU of 3fck by Molmil
Complex of UNG2 and a fragment-based design inhibitor
分子名称: 3-({[3-({[(1E)-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)methylidene]amino}oxy)propyl]amino}methyl)benzoic acid, Uracil-DNA glycosylase
著者Bianchet, M.A, Chung, S, Parker, J.B, Amzel, L.M, Stivers, J.T.
登録日2008-11-21
公開日2009-04-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Impact of linker strain and flexibility in the design of a fragment-based inhibitor
Nat.Chem.Biol., 5, 2009
3FCI
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BU of 3fci by Molmil
Complex of UNG2 and a fragment-based designed inhibitor
分子名称: 3-{(E)-[(3-{[(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)methyl]amino}propoxy)imino]methyl}benzoic acid, SODIUM ION, THIOCYANATE ION, ...
著者Bianchet, M.A, Chung, S, Parker, J.B, Amzel, L.M, Stivers, J.T.
登録日2008-11-21
公開日2009-04-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Impact of linker strain and flexibility in the design of a fragment-based inhibitor
Nat.Chem.Biol., 5, 2009
3FCF
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BU of 3fcf by Molmil
Complex of UNG2 and a fragment-based designed inhibitor
分子名称: 3-[(1E,7E)-8-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-3,6-dioxa-2,7-diazaocta-1,7-dien-1-yl]benzoic acid, THIOCYANATE ION, Uracil-DNA glycosylase
著者Bianchet, M.A, Chung, S, Parker, J.B, Amzel, L.M, Stivers, J.T.
登録日2008-11-21
公開日2009-04-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Impact of linker strain and flexibility in the design of a fragment-based inhibitor
Nat.Chem.Biol., 5, 2009
3FCL
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BU of 3fcl by Molmil
Complex of UNG2 and a fragment-based designed inhibitor
分子名称: 3-{[(4-{[(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)methyl]amino}butyl)amino]methyl}benzoic acid, THIOCYANATE ION, Uracil-DNA glycosylase
著者Bianchet, M.A, Chung, S, Parker, J.B, Amzel, L.M, Stivers, J.T.
登録日2008-11-21
公開日2009-04-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Impact of linker strain and flexibility in the design of a fragment-based inhibitor
Nat.Chem.Biol., 5, 2009

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