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PDB: 172 件

8D3R
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BU of 8d3r by Molmil
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in intermediate conformer
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(P*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*TP*AP*T)-3'), ...
著者Park, J, Yin, Y.W.
登録日2022-06-01
公開日2023-05-24
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Pol gamma coordinates DNA synthesis and proofreading to ensure mitochondrial genome integrity.
Nat.Struct.Mol.Biol., 30, 2023
8D33
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BU of 8d33 by Molmil
Human mitochondrial DNA polymerase gamma ternary complex with GC basepair
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (25-MER), ...
著者Park, J, Yin, Y.W.
登録日2022-05-31
公開日2023-05-24
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Pol gamma coordinates DNA synthesis and proofreading to ensure mitochondrial genome integrity.
Nat.Struct.Mol.Biol., 30, 2023
7JZS
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BU of 7jzs by Molmil
Aminoglycoside N-2'-Acetyltransferase-Ia [AAC(2')-Ia] in complex with CoA
分子名称: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, DI(HYDROXYETHYL)ETHER, ...
著者Park, J, Bassenden, A.V, Berghuis, A.M.
登録日2020-09-02
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural and phylogenetic analyses of resistance to next-generation aminoglycosides conferred by AAC(2') enzymes.
Sci Rep, 11, 2021
7SVU
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BU of 7svu by Molmil
TnsBctd-TnsC-TniQ complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (28-MER), DNA (29-MER), ...
著者Park, J, Tsai, A.W.T, Kellogg, E.H.
登録日2021-11-19
公開日2022-11-23
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structures of the holo CRISPR RNA-guided transposon integration complex
Nature, 613, 2023
5BYE
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BU of 5bye by Molmil
Crystal structure of human ribokinase in P212121 spacegroup
分子名称: CHLORIDE ION, Ribokinase, SODIUM ION
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-10
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of human ribokinase in P212121 spacegroup
To Be Published
5BYC
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BU of 5byc by Molmil
Crystal structure of human ribokinase in C2 spacegroup
分子名称: Ribokinase, SODIUM ION
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-10
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of unliganded human ribokinase in C2 spacegroup
To Be Published
5C41
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BU of 5c41 by Molmil
Crystal structure of human ribokinase in complex with AMPPCP in P21 spacegroup and with 4 protomers
分子名称: PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Ribokinase, ...
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-17
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of human ribokinase in complex with AMPPCP in P21 spacegroup and with 4 protomers
To Be Published
5C3Z
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BU of 5c3z by Molmil
Crystal structure of human ribokinase in complex with AMPPCP in C2 spacegroup
分子名称: CHLORIDE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Ribokinase, ...
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-17
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human ribokinase in complex with AMPPCP in C2 spacegroup
To Be Published
5BYD
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BU of 5byd by Molmil
Crystal structure of human ribokinase in P21 spacegroup
分子名称: POTASSIUM ION, Ribokinase, SODIUM ION
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-10
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human ribokinase in P21 spacegroup
To Be Published
5BYF
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BU of 5byf by Molmil
Crystal structure of human ribokinase in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Ribokinase, ...
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-10
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human ribokinase in complex with AMP
To Be Published
5C40
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BU of 5c40 by Molmil
Crystal structure of human ribokinase in complex with AMPPCP in P21 spacegroup
分子名称: PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Ribokinase, ...
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-17
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of human ribokinase in complex with AMPPCP in P21 spacegroup
To Be Published
5C3Y
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BU of 5c3y by Molmil
Structure of human ribokinase crystallized with AMPPNP
分子名称: AMP PHOSPHORAMIDATE, Ribokinase, SODIUM ION
著者Park, J, Chakrabarti, J, Singh, B, Gupta, R.S, Junop, M.S.
登録日2015-06-17
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of human ribokinase crystallized with AMPPNP
To Be Published
4GO6
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BU of 4go6 by Molmil
Crystal structure of HCF-1 self-association sequence 1
分子名称: HCF C-terminal chain 1, HCF N-terminal chain 1, SULFATE ION
著者Park, J, Lammers, F, Herr, W, Song, J.
登録日2012-08-18
公開日2012-10-17
最終更新日2013-07-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献HCF-1 self-association via an interdigitated Fn3 structure facilitates transcriptional regulatory complex formation
Proc.Natl.Acad.Sci.USA, 109, 2012
6LE5
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BU of 6le5 by Molmil
Crystal structure of the mitochondrial calcium uptake 1 and 2 heterodimer (MICU1-MICU2 heterodimer) in an apo state
分子名称: Calcium uptake protein 1, mitochondrial, Calcium uptake protein 2
著者Park, J, Lee, Y, Park, T, Kang, J.Y, Jin, M, Yang, J, Eom, S.H.
登録日2019-11-24
公開日2020-03-04
最終更新日2020-03-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the MICU1-MICU2 heterodimer provides insights into the gatekeeping threshold shift.
Iucrj, 7, 2020
4DEM
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BU of 4dem by Molmil
Crystal structure of human FPPS in complex with YS_04_70
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, [({4-[4-(propan-2-yloxy)phenyl]pyridin-2-yl}amino)methanediyl]bis(phosphonic acid)
著者Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
登録日2012-01-20
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Design and Synthesis of Active Site Inhibitors of the Human Farnesyl Pyrophosphate Synthase: Apoptosis and Inhibition of ERK Phosphorylation in Multiple Myeloma Cells.
J.Med.Chem., 55, 2012
6C56
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BU of 6c56 by Molmil
Crystal structure of mutant human geranylgeranyl pyrophosphate synthase (Y246D) in its Apo form
分子名称: Geranylgeranyl pyrophosphate synthase, {[(2-phenylthieno[2,3-d]pyrimidin-4-yl)amino]methylene}bis(phosphonic acid)
著者Park, J, Ta, V, Tsantrizos, Y.S, Berghuis, A.M.
登録日2018-01-15
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Unraveling the Prenylation-Cancer Paradox in Multiple Myeloma with Novel Geranylgeranyl Pyrophosphate Synthase (GGPPS) Inhibitors.
J. Med. Chem., 61, 2018
6C57
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BU of 6c57 by Molmil
Crystal structure of mutant human geranylgeranyl pyrophosphate synthase (Y246D) in complex with bisphosphonate inhibitor FV0109
分子名称: Geranylgeranyl pyrophosphate synthase, {[(2-{3-[(4-fluorobenzene-1-carbonyl)amino]phenyl}thieno[2,3-d]pyrimidin-4-yl)amino]methylene}bis(phosphonic acid)
著者Park, J, Bin, X, Vincent, F, Tsantrizos, Y.S, Berghuis, A.M.
登録日2018-01-15
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Unraveling the Prenylation-Cancer Paradox in Multiple Myeloma with Novel Geranylgeranyl Pyrophosphate Synthase (GGPPS) Inhibitors.
J. Med. Chem., 61, 2018
4LPG
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BU of 4lpg by Molmil
Crystal structure of human FPPS in complex with CL01131
分子名称: ({[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methanediyl)bis(phosphonic acid), Farnesyl pyrophosphate synthase, PHOSPHATE ION
著者Park, J, Leung, C.Y, Tsantrizos, Y.S, Berghuis, A.M.
登録日2013-07-16
公開日2014-06-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Multistage screening reveals chameleon ligands of the human farnesyl pyrophosphate synthase: implications to drug discovery for neurodegenerative diseases.
J.Med.Chem., 57, 2014
7VGM
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BU of 7vgm by Molmil
Crystal structure of Phenylalanine hydroxylase from Bacillus cereus ATCC 14579
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Park, J, Kim, K.-J.
登録日2021-09-17
公開日2022-04-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural studies of a novel auxiliary-domain-containing phenylalanine hydroxylase from Bacillus cereus ATCC 14579.
Acta Crystallogr D Struct Biol, 78, 2022
7SVV
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BU of 7svv by Molmil
TnsBctd-TnsC complex
分子名称: DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, ...
著者Park, J, Tsai, A.W.T, Kellogg, E.H.
登録日2021-11-19
公開日2022-08-10
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Mechanistic details of CRISPR-associated transposon recruitment and integration revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SVW
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BU of 7svw by Molmil
Strand-transfer complex of TnsB from ShCAST
分子名称: MAGNESIUM ION, STC_LE_For, STC_LE_Rev1, ...
著者Park, J, Tsai, A.W.T, Kellogg, E.H.
登録日2021-11-19
公開日2022-08-10
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Mechanistic details of CRISPR-associated transposon recruitment and integration revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
4XQT
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BU of 4xqt by Molmil
Crystal structure of human FPPS in complex with three magnesium ions
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
著者Park, J, Berghuis, A.M.
登録日2015-01-20
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human FPPS in complex with three magnesium ions
To Be Published
4XQS
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BU of 4xqs by Molmil
Crystal structure of human FPPS in complex with one magnesium ion
分子名称: Farnesyl pyrophosphate synthase, MAGNESIUM ION, SULFATE ION
著者Park, J, Berghuis, A.M.
登録日2015-01-20
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human FPPS in complex with one magnesium ion
To Be Published
4ZEV
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BU of 4zev by Molmil
Crystal structure of PfHAD1 in complex with mannose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-mannopyranose, MAGNESIUM ION, PHOSPHATE ION, ...
著者Park, J, Tolia, N.H.
登録日2015-04-20
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4ZEW
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BU of 4zew by Molmil
Crystal structure of PfHAD1 in complex with glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, PHOSPHATE ION, ...
著者Park, J, Tolia, N.H.
登録日2015-04-20
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015

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