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PDB: 105 results
3HUN
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Crystal structure of Penicillin binding protein 4 from Staphylococcus aureus COL in complex with Ampicillin
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Penicillin-binding protein 4
Authors:Navratna, V, Gopal, B.
Deposit date:2009-06-15
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for the role of Staphylococcus aureus Penicillin Binding Protein 4 in antimicrobial resistance
J.Bacteriol., 2009
3Q83
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase
Descriptor: Nucleoside diphosphate kinase
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-06
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 1814, 2011
3HUG
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Crystal structure of Mycobacterium tuberculosis anti-sigma factor RslA in complex with -35 promoter binding domain of sigL
Descriptor: PROBABLE CONSERVED MEMBRANE PROTEIN, RNA polymerase sigma factor, SULFATE ION, ...
Authors:Thakur, K.G, Gopal, B.
Deposit date:2009-06-14
Release date:2010-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural and biochemical bases for the redox sensitivity of Mycobacterium tuberculosis RslA
J.Mol.Biol., 397, 2010
3H9A
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Crystal structure of BacB, an enzyme involved in Bacilysin synthesis, in triclinic form
Descriptor: 3-PHENYLPYRUVIC ACID, Bacilysin biosynthesis protein bacB, COBALT (II) ION, ...
Authors:Rajavel, M, Gopal, B.
Deposit date:2009-04-30
Release date:2010-03-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Analysis of multiple crystal forms of Bacillus subtilis BacB suggests a role for a metal ion as a nucleant for crystallization
Acta Crystallogr.,Sect.D, 66, 2010
3HUM
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BU of 3hum by Molmil
Crystal structure of Penicillin binding protein 4 from Staphylococcus aureus COL in complex with Cefotaxime
Descriptor: (2R)-2-[(1R)-1-({[(2R)-2-amino-2,3-dihydro-1,3-thiazol-4-yl](methoxyimino)acetyl}amino)-2-oxoethyl]-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Penicillin-binding protein 4
Authors:Navratna, V, Gopal, B.
Deposit date:2009-06-15
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis for the role of Staphylococcus aureus Penicillin Binding Protein 4 in antimicrobial resistance
J.Bacteriol., 2009
3Q89
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase complexed with CDP
Descriptor: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-06
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 2011
3Q8U
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-07
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 1814, 2011
3Q8V
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase complexed with UDP
Descriptor: MAGNESIUM ION, Nucleoside diphosphate kinase, URIDINE-5'-DIPHOSPHATE
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-07
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 2011
3QY9
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The Crystal Structure of Dihydrodipicolinate reductase from Staphylococcus aureus
Descriptor: ACETATE ION, Dihydrodipicolinate reductase, GLYCEROL, ...
Authors:Girish, T.S, Gopal, B.
Deposit date:2011-03-03
Release date:2011-08-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and nucleotide specificity of Staphylococcus aureus dihydrodipicolinate reductase (DapB)
Febs Lett., 585, 2011
3Q8Y
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Crystal structure of Staphylococcus aureus nucleoside diphosphate kinase complexed with ADP and Vanadate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase, ...
Authors:Srivastava, S.K, Rajasree, K, Gopal, B.
Deposit date:2011-01-07
Release date:2011-07-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational basis for substrate recognition and regulation of catalytic activity in Staphylococcus aureus nucleoside di-phosphate kinase.
Biochim.Biophys.Acta, 2011
3GUZ
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Structural and substrate-binding studies of pantothenate synthenate (PS)provide insights into homotropic inhibition by pantoate in PS's
Descriptor: PANTOATE, Pantothenate synthetase
Authors:Chakrabarti, K.S, Thakur, K.G, Gopal, B, Sarma, S.P.
Deposit date:2009-03-30
Release date:2010-02-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:X-ray crystallographic and NMR studies of pantothenate synthetase provide insights into the mechanism of homotropic inhibition by pantoate
Febs J., 277, 2010
3I7T
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Crystal structure of Rv2704, a member of highly conserved YjgF/YER057c/UK114 family, from Mycobacterium tuberculosis
Descriptor: IODIDE ION, Putative uncharacterized protein
Authors:Thakur, K.G, Gopal, B.
Deposit date:2009-07-09
Release date:2010-02-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Mycobacterium tuberculosis Rv2704 is a member of the YjgF/YER057c/UK114 family.
Proteins, 78, 2009
3S3H
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Crystal structure of the catalytic domain of PTP10D from Drosophila melanogaster with a phosphopeptide substrate GP4
Descriptor: 1,4-BUTANEDIOL, 1-BUTANOL, Tyrosine-protein phosphatase 10D, ...
Authors:Madan, L.L, Gopal, B.
Deposit date:2011-05-18
Release date:2011-11-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Conformational basis for substrate recruitment in protein tyrosine phosphatase 10D
Biochemistry, 50, 2011
3S3F
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Crystal Structure of the catalytic domain of PTP10D from Drosophila melanogaster with a small molecule inhibitor Vanadate
Descriptor: 1,4-BUTANEDIOL, 1-BUTANOL, ISOPROPYL ALCOHOL, ...
Authors:Madan, L.L, Gopal, B.
Deposit date:2011-05-18
Release date:2011-11-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational basis for substrate recruitment in protein tyrosine phosphatase 10D
Biochemistry, 50, 2011
3S3K
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Crystal structure of the catalytic domain of PTP10D from Drosophila melanogaster with a small molecular inhibitor para-NitroCatechol Sulphate
Descriptor: N,4-DIHYDROXY-N-OXO-3-(SULFOOXY)BENZENAMINIUM, Tyrosine-protein phosphatase 10D
Authors:Madan, L.L, Gopal, B.
Deposit date:2011-05-18
Release date:2011-11-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformational basis for substrate recruitment in protein tyrosine phosphatase 10D
Biochemistry, 50, 2011
6OAQ
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Crystal structure of a dual sensor histidine kinase in BeF3- bound state
Descriptor: BERYLLIUM TRIFLUORIDE ION, Dual sensor histidine kinase, MAGNESIUM ION, ...
Authors:Heewhan, S, Zhong, R, Xiaoli, Z, Sepalika, B, Xiaojing, Y.
Deposit date:2019-03-18
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural basis of molecular logic OR in a dual-sensor histidine kinase.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OB8
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Crystal structure of a dual sensor histidine kinase in green light illuminated state
Descriptor: Dual sensor histidine kinase, MAGNESIUM ION, PHYCOCYANOBILIN
Authors:Heewhan, S, Zhong, R, Xiaoli, Z, Sepalika, B, Xiaojing, Y.
Deposit date:2019-03-19
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of molecular logic OR in a dual-sensor histidine kinase.
Proc.Natl.Acad.Sci.USA, 116, 2019
2O7G
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Crystal structure of the Pribnow Box recognition region of SigC from Mycobacterium tuberculosis
Descriptor: Probable RNA polymerase sigma-C factor, SULFATE ION
Authors:Thakur, K.G, Joshi, A.M, Gopal, B.
Deposit date:2006-12-11
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and biophysical studies on two promoter recognition domains of the extra-cytoplasmic function sigma factor sigma(C) from Mycobacterium tuberculosis.
J.Biol.Chem., 282, 2007
2O8X
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Crystal structure of the "-35 element" promoter recognition domain of Mycobacterium tuberculosis SigC
Descriptor: Probable RNA polymerase sigma-C factor, SULFATE ION
Authors:Thakur, K.G, Joshi, A.M, Gopal, B.
Deposit date:2006-12-12
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and biophysical studies on two promoter recognition domains of the extra-cytoplasmic function sigma factor sigma(C) from Mycobacterium tuberculosis.
J.Biol.Chem., 282, 2007
6IEO
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BU of 6ieo by Molmil
Crystal structure of Mycobacterium tuberculosis HtrA1 (Rv1223) in regulated conformation
Descriptor: Probable serine protease HtrA (DEGP protein), phenylmethanesulfonic acid
Authors:Gupta, A.K, Gopal, B.
Deposit date:2018-09-14
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The crystal structure of Mycobacterium tuberculosis high-temperature requirement A protein reveals an autoregulatory mechanism.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6K6W
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BU of 6k6w by Molmil
Structure of RNase J2 from Staphylococcus epidermidis
Descriptor: MANGANESE (II) ION, Ribonuclease J 2
Authors:Raj, R, Gopal, B.
Deposit date:2019-06-05
Release date:2020-10-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of RNase J1 from Staphylococcus epidermidis
J.Biol.Chem., 2020
6K6S
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BU of 6k6s by Molmil
Structure of RNase J1 from Staphylococcus epidermidis
Descriptor: MANGANESE (II) ION, Ribonuclease J 1
Authors:Raj, R, Gopal, B.
Deposit date:2019-06-04
Release date:2020-10-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.993 Å)
Cite:Structure of RNase J1 from Staphylococcus epidermidis
J.Biol.Chem., 2020
5ITW
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Crystal structure of Bacillus subtilis BacC Dihydroanticapsin 7-dehydrogenase
Descriptor: Dihydroanticapsin 7-dehydrogenase, SULFATE ION
Authors:Perinbam, K, Balaram, H, Row, T.N.G, Gopal, B.
Deposit date:2016-03-17
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Probing the influence of non-covalent contact networks identified by charge density analysis on the oxidoreductase BacC.
Protein Eng. Des. Sel., 30, 2017
5ITV
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BU of 5itv by Molmil
Crystal structure of Bacillus subtilis BacC Dihydroanticapsin 7-dehydrogenase in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Dihydroanticapsin 7-dehydrogenase
Authors:Perinbam, K, Balaram, H, Row, T.N.G, Gopal, B.
Deposit date:2016-03-17
Release date:2017-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Probing the influence of non-covalent contact networks identified by charge density analysis on the oxidoreductase BacC.
Protein Eng. Des. Sel., 30, 2017
5JFE
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Flavin-dependent thymidylate synthase with H2-dUMP
Descriptor: 1,2-ETHANEDIOL, 2'-deoxy-5'-uridylic acid, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Sapra, A, Stuckey, J, Palfey, B.
Deposit date:2016-04-19
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Evaluating H2-dUMP as an Intermediate in the oxidation of Flavin-dependent Thymidylate Synthase
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