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PDB: 45955 results

8SS0
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BU of 8ss0 by Molmil
Human sterol 14 alpha-demethylase (CYP51) in complex with the reaction intermediate 14 alpha-aldehyde dihydrolanosterol
Descriptor: 3beta-hydroxy-10alpha,13alpha-lanosta-8,24-dien-30-al, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hargrove, T.Y, Wawrzak, Z, Guengerich, F.P, Lepesheva, G.I.
Deposit date:2023-05-08
Release date:2024-01-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-18 Labeling Reveals a Mixed Fe-O Mechanism in the Last Step of Cytochrome P450 51 Sterol 14 alpha-Demethylation.
Angew.Chem.Int.Ed.Engl., 63, 2024
6UCE
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BU of 6uce by Molmil
N123-VRC34_pI3 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Descriptor: HIV fusion peptide, N123-VRC34_pI3 heavy chain, N123-VRC34_pI3 light chain
Authors:Xu, K, Kwong, P.D.
Deposit date:2019-09-16
Release date:2020-03-18
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (1.382 Å)
Cite:VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage.
Cell Host Microbe, 27, 2020
4M7J
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BU of 4m7j by Molmil
Crystal structure of S25-26 in complex with Kdo(2.8)Kdo(2.4)Kdo trisaccharide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, DI(HYDROXYETHYL)ETHER, ...
Authors:Haji-Ghassemi, O, Evans, S.V, Muller-Loennies, S, Saldova, R, Muniyappa, M, Brade, L, Rudd, P.M, Harvey, D.J, Kosma, P, Brade, H.
Deposit date:2013-08-12
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Groove-type Recognition of Chlamydiaceae-specific Lipopolysaccharide Antigen by a Family of Antibodies Possessing an Unusual Variable Heavy Chain N-Linked Glycan.
J.Biol.Chem., 289, 2014
3NQ4
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BU of 3nq4 by Molmil
30mer structure of Lumazine synthase from Salmonella typhimurium LT2
Descriptor: 6,7-dimethyl-8-ribityllumazine synthase, SULFATE ION
Authors:Kumar, P, Singh, M, Karthikeyan, S.
Deposit date:2010-06-29
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of Lumazine synthase from Salmonella typhimurium LT2
To be Published
6UO0
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BU of 6uo0 by Molmil
Crystal structure of cytosolic fumarate hydratase from Leishmania major in a complex with S-malate
Descriptor: (2S)-2-hydroxybutanedioic acid, Fumarate hydratase 2, GLYCEROL, ...
Authors:Feliciano, P.R, Drennan, C.L.
Deposit date:2019-10-14
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Investigations of the [4Fe-4S] Cluster-Containing Fumarate Hydratase fromLeishmania major.
Biochemistry, 58, 2019
2DGC
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BU of 2dgc by Molmil
GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DNA
Descriptor: DNA (5'-D(*TP*GP*GP*AP*GP*AP*TP*GP*AP*CP*GP*TP*CP*AP*TP*CP*T P*CP*C)-3'), PROTEIN (GCN4)
Authors:Keller, W, Koenig, P, Richmond, T.J.
Deposit date:1995-09-28
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a bZIP/DNA complex at 2.2 A: determinants of DNA specific recognition.
J.Mol.Biol., 254, 1995
6AIM
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BU of 6aim by Molmil
Cab2 mutant H337A complex with phosphopantothenate-cysteine
Descriptor: N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl-L-cysteine, Phosphopantothenate--cysteine ligase CAB2
Authors:Zheng, P, Zhu, Z.
Deposit date:2018-08-24
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystallographic Analysis of the Catalytic Mechanism of Phosphopantothenoylcysteine Synthetase from Saccharomyces cerevisiae.
J. Mol. Biol., 431, 2019
1R4L
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BU of 1r4l by Molmil
Inhibitor Bound Human Angiotensin Converting Enzyme-Related Carboxypeptidase (ACE2)
Descriptor: (S,S)-2-{1-CARBOXY-2-[3-(3,5-DICHLORO-BENZYL)-3H-IMIDAZOL-4-YL]-ETHYLAMINO}-4-METHYL-PENTANOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Towler, P, Staker, B, Prasad, S.G, Menon, S, Ryan, D, Tang, J, Parsons, T, Fisher, M, Williams, D, Dales, N.A, Patane, M.A, Pantoliano, M.W.
Deposit date:2003-10-07
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:ACE2 X-ray structures reveal a large hinge-bending motion important for inhibitor binding and catalysis.
J.Biol.Chem., 279, 2004
4MC3
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BU of 4mc3 by Molmil
Hedycaryol synthase in complex with Nerolidol
Descriptor: (3R,6E)-3,7,11-trimethyldodeca-1,6,10-trien-3-ol, Putative sesquiterpene cyclase
Authors:Baer, P, Rabe, P, Cirton, C, Oliveira Mann, C, Kaufmann, N, Groll, M, Dickschat, J.
Deposit date:2013-08-21
Release date:2014-01-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hedycaryol synthase in complex with nerolidol reveals terpene cyclase mechanism.
Chembiochem, 15, 2014
6LU9
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BU of 6lu9 by Molmil
Rat ionotropic Glutamate Delta-2 receptor in complex with 7-CKA and Calcium
Descriptor: Glutamate receptor ionotropic, delta-2
Authors:Kumar, J, Burada, A.P.
Deposit date:2020-01-27
Release date:2020-06-17
Last modified:2020-12-30
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:The architecture of GluD2 ionotropic delta glutamate receptor elucidated by cryo-EM.
J.Struct.Biol., 211, 2020
3NZM
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BU of 3nzm by Molmil
Crystal structure of DNAE intein with N-extein in redox trap
Descriptor: DNA polymerase III subunit alpha, SULFATE ION
Authors:Van Roey, P, Belfort, M, Callahan, B.P.
Deposit date:2010-07-16
Release date:2011-06-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of catalytically competent intein caught in a redox trap with functional and evolutionary implications.
Nat.Struct.Mol.Biol., 18, 2011
4HIY
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BU of 4hiy by Molmil
crystal structure of R34/53A, D95N, H112W mutant of borna disease virus matrix protein
Descriptor: Matrix protein, SULFATE ION
Authors:Dautel, P, Kolenko, P, Stubbs, M.T.
Deposit date:2012-10-12
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Matrix protein variants provide support for alternative borna disease virus infection pathway
To be Published
4Q3D
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BU of 4q3d by Molmil
PylD cocrystallized with L-Ornithine-Nd-D-ornithine and NAD+
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Quitterer, F, Beck, P, Bacher, A, Groll, M.
Deposit date:2014-04-11
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Formation of Pyrroline and Tetrahydropyridine Rings in Amino Acids Catalyzed by Pyrrolysine Synthase (PylD).
Angew.Chem.Int.Ed.Engl., 53, 2014
7VT5
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BU of 7vt5 by Molmil
Crystal structure of CBM deleted MtGlu5 from Meiothermus taiwanensis WR-220
Descriptor: Endoglucanase H, METHIONINE, TRYPTOPHAN
Authors:Ye, T.J, Ko, P.T, Huang, K.F, Wu, S.H.
Deposit date:2021-10-28
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Synergic action of an inserted carbohydrate-binding module in a glycoside hydrolase family 5 endoglucanase.
Acta Crystallogr D Struct Biol, 78, 2022
3RY4
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BU of 3ry4 by Molmil
1.5 Angstrom resolution structure of glycosylated fcgammariia (low-responder polymorphism)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Low affinity immunoglobulin gamma Fc region receptor II-a
Authors:Ramsland, P.A, Farrugia, W, Hogarth, P.M.
Deposit date:2011-05-11
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis for Fc{gamma}RIIa Recognition of Human IgG and Formation of Inflammatory Signaling Complexes.
J.Immunol., 187, 2011
7VT6
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BU of 7vt6 by Molmil
Crystal structure of CBM deleted MtGlu5 in complex with BGC.
Descriptor: Endoglucanase H, GLYCEROL, TRYPTOPHAN, ...
Authors:Ye, T.J, Ko, P.T, Huang, K.F, Wu, S.H.
Deposit date:2021-10-28
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Synergic action of an inserted carbohydrate-binding module in a glycoside hydrolase family 5 endoglucanase.
Acta Crystallogr D Struct Biol, 78, 2022
4HSO
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BU of 4hso by Molmil
Crystal structure of S213G variant DAH7PS from Neisseria meningitidis
Descriptor: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ...
Authors:Cross, P.J, Pietersma, A.L, Allison, T.M, Wilson-Coutts, S.M, Cochrane, F.C, Parker, E.J.
Deposit date:2012-10-30
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Neisseria meningitidis expresses a single 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase that is inhibited primarily by phenylalanine.
Protein Sci., 22, 2013
6AI9
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BU of 6ai9 by Molmil
Cab2 mutant-H337A complex with phosphopantothenate
Descriptor: N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanine, Phosphopantothenate--cysteine ligase CAB2
Authors:Zheng, P, Zhu, Z.
Deposit date:2018-08-22
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystallographic Analysis of the Catalytic Mechanism of Phosphopantothenoylcysteine Synthetase from Saccharomyces cerevisiae.
J. Mol. Biol., 431, 2019
3EMP
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BU of 3emp by Molmil
Crystal Structure of the S-acetanilide modified form of C165S AhpC
Descriptor: Alkyl hydroperoxide reductase subunit C
Authors:Karplus, P.A, Hall, A.
Deposit date:2008-09-24
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (4 Å)
Cite:Cysteine pK(a) Values for the Bacterial Peroxiredoxin AhpC
Biochemistry, 47, 2008
6M7Y
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BU of 6m7y by Molmil
Dehydratase, NisB, bound to a non-eliminable substrate analog
Descriptor: Lantibiotic, Nisin biosynthesis protein NisB
Authors:Cogan, D.P, Nair, S.K.
Deposit date:2018-08-21
Release date:2019-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Proc.Natl.Acad.Sci.USA, 116, 2019
4HOA
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BU of 4hoa by Molmil
Crystal structure of the complex of type 1 ribosome inactivating protein from Momordica Balsamina with B-D-galactopyranosyl-(1-4)-D-glucose at 2.0 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Yamini, S, Pandey, N, Kushwaha, G.S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-10-22
Release date:2012-11-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of type 1 ribosome inactivating protein from Momordica Balsamina with B-D-galactopyranosyl-(1-4)-D-glucose at 2.0 A resolution
To be Published
6UCF
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BU of 6ucf by Molmil
N123-VRC34_pI4 HIV neutralizing antibody in complex with HIV fusion peptide residue 512-519
Descriptor: HIV fusion peptide, N123-VRC34_pI4 heavy chain, N123-VRC34_pI4 light chain
Authors:Xu, K, Kwong, P.D.
Deposit date:2019-09-16
Release date:2020-03-18
Last modified:2020-04-22
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage.
Cell Host Microbe, 27, 2020
6M5T
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BU of 6m5t by Molmil
The coordinate of the nuclease domain of the apo terminase complex
Descriptor: Tripartite terminase subunit 3
Authors:Yang, Y.X, Yang, P, Wang, N, Chen, Z.H, Zhou, Z.H, Rao, Z.H, Wang, X.X.
Deposit date:2020-03-11
Release date:2020-10-28
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Protein Cell, 11, 2020
8CQ2
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BU of 8cq2 by Molmil
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, C16S, C20S, C870S, T1279C mutant
Descriptor: TcdA1
Authors:Nganga, P.N, Roderer, D, Belyy, A, Prumbaum, D, Raunser, S.
Deposit date:2023-03-03
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Kinetics of the syringe-like injection mechanism of Tc toxins
to be published
2DTU
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BU of 2dtu by Molmil
Crystal structure of the beta hairpin loop deletion variant of RB69 gp43 in complex with DNA containing an abasic site analog
Descriptor: 5'-D(*CP*GP*(3DR)P*CP*TP*TP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3', 5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*AP*AP*GP*A)-3', DNA polymerase
Authors:Aller, P, Hogg, M, Konigsberg, W, Wallace, S.S, Doublie, S.
Deposit date:2006-07-15
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural and biochemical investigation of the role in proofreading of a beta hairpin loop found in the exonuclease domain of a replicative DNA polymerase of the B family.
J.Biol.Chem., 282, 2007

224004

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