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PDB: 46375 results

2J9R
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BU of 2j9r by Molmil
Thymidine kinase from B. anthracis in complex with dT.
Descriptor: PHOSPHATE ION, THYMIDINE, THYMIDINE KINASE, ...
Authors:Kosinska, U, Carnrot, C, Sandrini, M.P.B, Clausen, A.R, Wang, L, Piskur, J, Eriksson, S, Eklund, H.
Deposit date:2006-11-15
Release date:2007-01-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Studies of Thymidine Kinases from Bacillus Anthracis and Bacillus Cereus Provide Insights Into Quaternary Structure and Conformational Changes Upon Substrate Binding
FEBS J., 274, 2007
2JCO
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BU of 2jco by Molmil
Crystal structure of wild type alpha-1,3 Galactosyltransferase in the absence of ligands
Descriptor: GLYCEROL, N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYL TRANSFERASE
Authors:Jamaluddin, H, Tumbale, P, Withers, S.G, Acharya, K.R, Brew, K.
Deposit date:2006-12-28
Release date:2007-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Conformational Changes Induced by Binding Udp-2F-Galactose to Alpha-1,3 Galactosyltransferase-Implications for Catalysis.
J.Mol.Biol., 369, 2007
4BVU
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BU of 4bvu by Molmil
Structure of Shigella effector OspG in complex with host UbcH5c- Ubiquitin conjugate
Descriptor: PROTEIN KINASE OSPG, UBIQUITIN, UBIQUITIN-CONJUGATING ENZYME E2 D3
Authors:Pruneda, J.N, LeTrong, I, Stenkamp, R.E, Klevit, R.E, Brzovic, P.S.
Deposit date:2013-06-28
Release date:2014-01-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:E2~Ub Conjugates Regulate the Kinase Activity of Shigella Effector Ospg During Pathogenesis.
Embo J., 33, 2014
4BRV
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BU of 4brv by Molmil
Superoxide reductase (Neelaredoxin) from Ignicoccus hospitalis E23A
Descriptor: DESULFOFERRODOXIN, FERROUS IRON-BINDING REGION, FE (III) ION
Authors:Romao, C.V, Matias, P.M, Pinho, F.G, Sousa, C.M, Barradas, A.R, Pinto, A.F, Teixeira, M, Bandeiras, T.M.
Deposit date:2013-06-05
Release date:2014-06-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of a Natural Sor Mutant
To be Published
7PSQ
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BU of 7psq by Molmil
Crystal structure of S100A4 labeled with NU074381b.
Descriptor: (2~{R},4~{R})-1-ethanoyl-~{N}-naphthalen-1-yl-4-phenyl-pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Giroud, C, Szommer, T, Coxon, C, Monteiro, O, Christott, T, Bennett, J, Aitmakhanova, K, Raux, B, Newman, J, Elkins, J, Krojer, T, Arruda Bezerra, G, Koekemoer, L, Bountra, C, Von Delft, F, Brennan, P, Fedorov, O.
Deposit date:2021-09-23
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of S100A4 labeled with NU074381b.
To Be Published
4XEB
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BU of 4xeb by Molmil
The structure of P. funicolosum Cel7A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glucanase, ...
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2014-12-23
Release date:2016-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Engineering enhanced cellobiohydrolase activity
Nat Commun, 9(1), 2018
5O6F
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BU of 5o6f by Molmil
NMR structure of cold shock protein A from Corynebacterium pseudotuberculosis
Descriptor: Cold-shock protein
Authors:Caruso, I.P, Panwalkar, V, Coronado, M.A, Dingley, A.J, Cornelio, M.L, Willbold, D, Arni, R.K, Eberle, R.J.
Deposit date:2017-06-06
Release date:2017-07-19
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure and interaction of Corynebacterium pseudotuberculosis cold shock protein A with Y-box single-stranded DNA fragment.
FEBS J., 285, 2018
2JIB
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BU of 2jib by Molmil
X-ray structure of Oxalyl-CoA decarboxylase in complex with coenzyme- A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, COENZYME A, MAGNESIUM ION, ...
Authors:Berthold, C.L, Toyota, C.G, Moussatche, P, Wood, M.D, Leeper, F, Richards, N.G.J, Lindqvist, Y.
Deposit date:2007-02-26
Release date:2007-07-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallographic Snapshots of Oxalyl-Coa Decarboxylase Give Insights Into Catalysis by Nonoxidative Thdp-Dependent Decarboxylases
Structure, 15, 2007
3EFC
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BU of 3efc by Molmil
Crystal Structure of YaeT periplasmic domain
Descriptor: Outer membrane protein assembly factor yaeT
Authors:Gatzeva-Topalova, P.Z, Walton, T.A, Sousa, M.C.
Deposit date:2008-09-08
Release date:2008-12-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of YaeT: conformational flexibility and substrate recognition.
Structure, 16, 2008
7ZTC
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BU of 7ztc by Molmil
Non-muscle F-actin decorated with non-muscle tropomyosin 1.6
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Non-muscle tropomyosin 1.6, actin, ...
Authors:Selvaraj, M, Kokate, S, Kogan, K, Kotila, T, Kremneva, E, Lappalainen, P, Huiskonen, J.T.
Deposit date:2022-05-09
Release date:2023-01-11
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis underlying specific biochemical activities of non-muscle tropomyosin isoforms.
Cell Rep, 42, 2023
2JBA
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BU of 2jba by Molmil
PhoB response regulator receiver domain constitutively-active double mutant D53A and Y102C.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB, SODIUM ION
Authors:Arribas-Bosacoma, R, Ferrer-Orta, C, Kim, S.-K, Blanco, A.G, Pereira, P.J.B, Gomis-Ruth, F.X, Wanner, B.L, Coll, M, Sola, M.
Deposit date:2006-12-05
Release date:2007-01-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The X-Ray Crystal Structures of Two Constitutively Active Mutants of the Escherichia Coli Phob Receiver Domain Give Insights Into Activation.
J.Mol.Biol., 366, 2007
7ZLG
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BU of 7zlg by Molmil
Cryo-EM structure of C-mannosyltransferase CeDPY19, in complex with acceptor peptide and bound to CMT2-Fab and anti-Fab nanobody
Descriptor: Anti-Fab nanobody, C-mannosyltransferase dpy-19, CMT2-Fab heavy chain, ...
Authors:Bloch, J.S, Mukherjee, S, Mao, R, Irobalieva, R, Kossiakoff, A.A, Goddard-Borger, E.D, Locher, K.P.
Deposit date:2022-04-15
Release date:2023-01-11
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structure, sequon recognition and mechanism of tryptophan C-mannosyltransferase.
Nat.Chem.Biol., 19, 2023
5OVC
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BU of 5ovc by Molmil
PDZ domain from rat Shank3 bound to the C terminus of GKAP
Descriptor: CHLORIDE ION, GKAP C terminus, synthetic peptide, ...
Authors:Ponna, S.K, Myllykoski, M, Boeckers, T.M, Kursula, P.
Deposit date:2017-08-28
Release date:2018-03-07
Last modified:2018-07-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.
J. Neurochem., 145, 2018
5OUL
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BU of 5oul by Molmil
The crystal structure of CK2alpha in complex with compound 9
Descriptor: ACETATE ION, Casein kinase II subunit alpha, [3-chloranyl-4-(3-fluorophenyl)phenyl]methanamine, ...
Authors:Brear, P, De Fusco, C, Iegre, J, Yoshida, M, Mitchell, S, Rossmann, M, Carro, L, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2017-08-24
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Second-generation CK2 alpha inhibitors targeting the alpha D pocket.
Chem Sci, 9, 2018
1SS2
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BU of 1ss2 by Molmil
Solution structure of the second complement control protein (CCP) module of the GABA(B)R1a receptor, Pro-119 cis conformer
Descriptor: Gamma-aminobutyric acid type B receptor, subunit 1
Authors:Blein, S, Uhrin, D, Smith, B.O, White, J.H, Barlow, P.N.
Deposit date:2004-03-23
Release date:2004-10-12
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural analysis of the complement control protein (CCP) modules of GABA(B) receptor 1a: only one of the two CCP modules is compactly folded.
J.Biol.Chem., 279, 2004
2JLH
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BU of 2jlh by Molmil
Crystal Structure of the Cytoplasmic domain of Yersinia Pestis YscU N263A mutant
Descriptor: PENTAETHYLENE GLYCOL, YOP PROTEINS TRANSLOCATION PROTEIN U
Authors:Lountos, G.T, Austin, B.P, Nallamsetty, S, Waugh, D.S.
Deposit date:2008-09-09
Release date:2009-02-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Atomic Resolution Structure of the Cytoplasmic Domain of Yersinia Pestis Yscu, a Regulatory Switch Involved in Type III Secretion.
Protein Sci., 18, 2009
4CIH
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BU of 4cih by Molmil
Structure of LntA-K180D-K181D from Listeria monocytogenes
Descriptor: LISTERIA NUCLEAR TARGETED PROTEIN A
Authors:Lebreton, A, Job, V, Ragon, M, Le Monnier, A, Dessen, A, Cossart, P, Bierne, H.
Deposit date:2013-12-09
Release date:2014-02-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural basis for the inhibition of the chromatin repressor BAHD1 by the bacterial nucleomodulin LntA.
MBio, 5, 2014
2JAN
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BU of 2jan by Molmil
TYROSYL-TRNA SYNTHETASE FROM MYCOBACTERIUM TUBERCULOSIS IN UNLIGANDED STATE
Descriptor: TYROSYL-TRNA SYNTHETASE
Authors:Hartmann, M.D, Shkolnaya, L.A, Bourenkov, G.P, Strizhov, N.I, Bartunik, H.D.
Deposit date:2006-11-29
Release date:2008-02-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure of Tyrosyl-tRNA Synthetase from Mycobacterium Tuberculosis
To be Published
4CKB
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BU of 4ckb by Molmil
Vaccinia virus capping enzyme complexed with GTP and SAH
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MRNA-CAPPING ENZYME CATALYTIC SUBUNIT, MRNA-CAPPING ENZYME REGULATORY SUBUNIT, ...
Authors:Kyrieleis, O.J.P, Chang, J, de la Pena, M, Shuman, S, Cusack, S.
Deposit date:2014-01-02
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Vaccinia Virus Mrna Capping Enzyme Provides Insights Into the Mechanism and Evolution of the Capping Apparatus.
Structure, 22, 2014
3EPP
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BU of 3epp by Molmil
Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin
Descriptor: SINEFUNGIN, mRNA cap guanine-N7 methyltransferase
Authors:Amaya, M.F, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Min, J, Plotnikov, A.N, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2008-09-29
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin.
To be Published
8F2B
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BU of 8f2b by Molmil
Amylin 3 Receptor in complex with Gs and Pramlintide analogue peptide San45
Descriptor: (2S)-2-{[(1R)-1-hydroxyhexadecyl]oxy}-3-{[(1R)-1-hydroxyoctadecyl]oxy}propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
Authors:Cao, J, Sexton, P.M, Wootten, D.L, Belousoff, M.J.
Deposit date:2022-11-07
Release date:2023-08-02
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Structural insight into selectivity of amylin and calcitonin receptor agonists.
Nat.Chem.Biol., 20, 2024
2JLC
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BU of 2jlc by Molmil
Crystal structure of E.coli MenD, 2-succinyl-5-enolpyruvyl-6-hydroxy- 3-cyclohexadiene-1-carboxylate synthase - native protein
Descriptor: 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE -1-CARBOXYLATE SYNTHASE, MANGANESE (II) ION, THIAMINE DIPHOSPHATE
Authors:Dawson, A, Fyfe, P.K, Hunter, W.N.
Deposit date:2008-09-08
Release date:2008-10-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Specificity and Reactivity in Menaquinone Biosynthesis: The Structure of Escherichia Coli Mend (2-Succinyl-5-Enolpyruvyl-6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase).
J.Mol.Biol., 384, 2008
2JLF
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BU of 2jlf by Molmil
STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA- DEPENDENT RNA POLYMERASE
Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-08
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
7PJN
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BU of 7pjn by Molmil
Crystal Structure of Ivosidenib-resistant IDH1 variant R132C S280F in complex with NADPH and inhibitor DS-1001B
Descriptor: (E)-3-(1-(5-(2-fluoropropan-2-yl)-3-(2,4,6-trichlorophenyl)isoxazole-4-carbonyl)-3-methyl-1H-indol-4-yl)acrylic acid, CITRIC ACID, GLYCEROL, ...
Authors:Reinbold, R, Rabe, P, Abboud, M.I, Schofield, C.J, Clifton, I.J.
Deposit date:2021-08-24
Release date:2022-07-13
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Resistance to the isocitrate dehydrogenase 1 mutant inhibitor ivosidenib can be overcome by alternative dimer-interface binding inhibitors.
Nat Commun, 13, 2022
4CML
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BU of 4cml by Molmil
Crystal Structure of INPP5B in complex with Phosphatidylinositol 3,4- bisphosphate
Descriptor: 1,2-dioctanoyl phosphatidyl epi-inositol (3,4)-bisphosphate, CHLORIDE ION, GLYCEROL, ...
Authors:Tresaugues, L, Arrowsmith, C.H, Berglund, H, Bountra, C, Edwards, A.M, Ekblad, T, Flodin, S, Graslund, S, Karlberg, T, Moche, M, Nyman, T, Schuler, H, Silvander, C, Thorsell, A.G, Weigelt, J, Welin, M, Nordlund, P.
Deposit date:2014-01-16
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Phosphoinositide Substrate Recognition, Catalysis, and Membrane Interactions in Human Inositol Polyphosphate 5-Phosphatases.
Structure, 22, 2014

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