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PDB: 45955 results

8AAJ
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BU of 8aaj by Molmil
Crystal structure of the Pyrococcus abyssi RPA (apo form)
Descriptor: RPA14 subunit of the hetero-oligomeric complex involved in homologous recombination, RPA32 subunit of the hetero-oligomeric complex involved in homologous recombination, Replication factor A, ...
Authors:Legrand, P, Madru, C, Sauguet, L.
Deposit date:2022-07-01
Release date:2023-05-03
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:DNA-binding mechanism and evolution of replication protein A.
Nat Commun, 14, 2023
1FHZ
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BU of 1fhz by Molmil
PSORALEN CROSS-LINKED D(CCGGTACCGG) FORMS HOLLIDAY JUNCTION
Descriptor: 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
Authors:Eichman, B.F, Mooers, B.H.M, Alberti, M, Hearst, J.E, Ho, P.S.
Deposit date:2000-08-02
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structures of psoralen cross-linked DNAs: drug-dependent formation of Holliday junctions.
J.Mol.Biol., 308, 2001
5WK0
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BU of 5wk0 by Molmil
Crystal structure of the bacillithiol transferase BstA from Staphylococcus aureus.
Descriptor: Damage-inducible protein DinB, NICKEL (II) ION
Authors:Cook, P.D, Francis, J.W.
Deposit date:2017-07-24
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.335 Å)
Cite:Structure and function of the bacillithiol-S-transferase BstA from Staphylococcus aureus.
Protein Sci., 27, 2018
6B35
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BU of 6b35 by Molmil
NMR ensemble of Tyrocidine A analogue AC3.28
Descriptor: Tyrocidine A analogue D-PHE-BE2-PHE-D-PHE-ASN-LYS-TYR-VAL-ORN-LEU
Authors:Cameron, A.J, Ewdards, P.J.B, Harjes, E, Sarojini, V.
Deposit date:2017-09-20
Release date:2017-12-06
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Tyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity.
J. Med. Chem., 60, 2017
6BDV
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BU of 6bdv by Molmil
Crystal structure of Caspase 3 S150A
Descriptor: AZIDE ION, Acetyl-Asp-Glu-Val-Asp-CMK, CHLORIDE ION, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-24
Release date:2018-02-14
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.938 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6B1M
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BU of 6b1m by Molmil
Disrupted hydrogen bond network impairs ATPase activity in an Hsc70 cysteine mutant
Descriptor: GLYCEROL, Heat shock protein family A (Hsp70) member 8, MAGNESIUM ION, ...
Authors:O'Donnell, J.P.
Deposit date:2017-09-18
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Disrupted Hydrogen-Bond Network and Impaired ATPase Activity in an Hsc70 Cysteine Mutant.
Biochemistry, 57, 2018
5FFN
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BU of 5ffn by Molmil
Complex of subtilase SubTY from Bacillus sp. TY145 with chymotrypsin inhibitor CI2A
Descriptor: CALCIUM ION, Enzyme subtilase SubTY from Bacillus sp. TY145, SODIUM ION, ...
Authors:McAuley, K.E, Svendsen, A, Oestergaard, P.R, Dohnalek, J, Wilson, K.S.
Deposit date:2015-12-18
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Stabilization of Enzymes by Metal Binding: Structures of Two Alkalophilic Bacillus Subtilases and Analysis of the Second Metal-Binding Site of the Subtilase Family
Book, 2016
3T65
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BU of 3t65 by Molmil
S25-2- A(2-8)KDO disaccharide complex
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, MAGNESIUM ION, S25-2 FAB (IGG1K) heavy chain, ...
Authors:Nguyen, H.P, Seto, N.O, Mackenzie, C.R, Brade, L, Kosma, P, Brade, H, Evans, S.V.
Deposit date:2011-07-28
Release date:2011-08-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Germline antibody recognition of distinct carbohydrate epitopes.
Nat.Struct.Biol., 10, 2003
2VCX
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BU of 2vcx by Molmil
Complex structure of prostaglandin D2 synthase at 2.1A.
Descriptor: GLUTATHIONE, GLUTATHIONE-REQUIRING PROSTAGLANDIN D SYNTHASE, MAGNESIUM ION, ...
Authors:Hohwy, M, Spadola, L, Lundquist, B, von Wachenfeldt, K, Persdotter, S, Hawtin, P, Dahmen, J, Groth-Clausen, I, Folmer, R.H.A, Edman, K.
Deposit date:2007-09-27
Release date:2008-04-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel Prostaglandin D Synthase Inhibitors Generated by Fragment-Based Drug Design.
J.Med.Chem., 51, 2008
6BG1
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BU of 6bg1 by Molmil
Caspase-3 Mutant - D9A,D28A,S150E
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, Caspase-3, SODIUM ION
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-27
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6B85
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BU of 6b85 by Molmil
Crystal structure of transmembrane protein TMHC4_R
Descriptor: TMHC4_R
Authors:Lu, P, DiMaio, F, Min, D, Bowie, J, Wei, K.Y, Baker, D.
Deposit date:2017-10-05
Release date:2018-03-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.889 Å)
Cite:Accurate computational design of multipass transmembrane proteins.
Science, 359, 2018
6FNT
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BU of 6fnt by Molmil
Ergothioneine-biosynthetic methyltransferase EgtD in complex with pyrrolidinohistidine
Descriptor: Histidine N-alpha-methyltransferase, Pyrrolidinohistidine
Authors:Vit, A, Blankenfeldt, W, Seebeck, F.P.
Deposit date:2018-02-05
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inhibition and Regulation of the Ergothioneine Biosynthetic Methyltransferase EgtD.
ACS Chem. Biol., 13, 2018
1FHY
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BU of 1fhy by Molmil
PSORALEN CROSS-LINKED D(CCGCTAGCGG) FORMS HOLLIDAY JUNCTION
Descriptor: 4'-HYDROXYMETHYL-4,5',8-TRIMETHYLPSORALEN, CALCIUM ION, DNA (5'-D(*CP*CP*GP*CP*TP*AP*GP*CP*GP*G)-3')
Authors:Eichman, B.F, Mooers, B.H.M, Alberti, M, Hearst, J.E, Ho, P.S.
Deposit date:2000-08-02
Release date:2001-04-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structures of psoralen cross-linked DNAs: drug-dependent formation of Holliday junctions.
J.Mol.Biol., 308, 2001
2VKP
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BU of 2vkp by Molmil
Crystal structure of BTB domain from BTBD6
Descriptor: 1,2-ETHANEDIOL, BTB/POZ DOMAIN-CONTAINING PROTEIN 6, POTASSIUM ION
Authors:Cooper, C.D.O, Pike, A.C.W, Salah, E, Filippakopoulos, P, Bunkoczi, G, Elkins, J.M, von Delft, F, Gileadi, O, Edwards, A, Weigelt, J, Arrowsmith, C.H, Knapp, S.
Deposit date:2007-12-21
Release date:2008-02-12
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Btb Domain from Btbd6
To be Published
6FP7
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BU of 6fp7 by Molmil
mTFP1/DARPin 1238_E11 complex in space group P6522
Descriptor: DARPin1238_E11, GFP-like fluorescent chromoprotein cFP484, GLYCEROL
Authors:Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T.
Deposit date:2018-02-09
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.576 Å)
Cite:DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations.
Biol Open, 7, 2018
6BBW
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BU of 6bbw by Molmil
Structure of the major pilin protein (T3.2) from Streptococcus pyogenes serotype GAS13637
Descriptor: CALCIUM ION, Major pilin backbone protein T-antigen, T3.2.
Authors:Young, P.G, Baker, E.N, Moreland, N.J.
Deposit date:2017-10-19
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Group AStreptococcusT Antigens Have a Highly Conserved Structure Concealed under a Heterogeneous Surface That Has Implications for Vaccine Design.
Infect.Immun., 87, 2019
6BC5
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BU of 6bc5 by Molmil
Cryo X-ray structure of coenzyme A bound AAC-VIa
Descriptor: AAC 3-VI protein, COENZYME A
Authors:Cuneo, M.J, Kumar, P, Serpersu, E.H.
Deposit date:2017-10-20
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A low-barrier hydrogen bond mediates antibiotic resistance in a noncanonical catalytic triad.
Sci Adv, 4, 2018
6BCM
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BU of 6bcm by Molmil
Structure of a Self-inhibited N475A variant of the Venezuelan Equine Encephalitis Virus (VEEV) nsP2 cysteine protease
Descriptor: GLYCEROL, Protease nsP2, SODIUM ION
Authors:Compton, J.R, Legler, P.M.
Deposit date:2017-10-20
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mutation of Asn-475 in the Venezuelan Equine Encephalitis Virus nsP2 Cysteine Protease Leads to a Self-Inhibited State.
Biochemistry, 56, 2017
5FNY
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BU of 5fny by Molmil
Low solvent content crystal form of Zn containing Iron sulfur cluster repair protein YtfE
Descriptor: FE (III) ION, IRON-SULFUR CLUSTER REPAIR PROTEIN YTFE, NONAETHYLENE GLYCOL, ...
Authors:Lo, F.-C, Hsieh, C.-C, Maestre-Reyna, M, Chen, C.-Y, Ko, T.-P, Horng, Y.-C, Lai, Y.-C, Chiang, Y.-W, Chou, C.-M, Chiang, C.-H, Huang, W.-N, Liaw, W.-F.
Deposit date:2015-11-17
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of the Repair of Iron Centers Protein Ytfe and its Interaction with No
Chemistry, 22, 2016
2J59
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BU of 2j59 by Molmil
Crystal structure of the ARF1:ARHGAP21-ArfBD complex
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ADP-RIBOSYLATION FACTOR 1, ...
Authors:Menetrey, J, Perderiset, M, Cicolari, J, Dubois, T, El Khatib, N, El Khadali, F, Franco, M, Chavrier, P, Houdusse, A.
Deposit date:2006-09-13
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Arf1-Mediated Recruitment of Arhgap21 to Golgi Membranes.
Embo J., 26, 2007
6FQE
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BU of 6fqe by Molmil
Phosphotriesterase PTE_A53_4
Descriptor: (4~{S},6~{R})-2,2,6-trimethyl-1,3-dioxan-4-ol, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Dym, O, Aggarwal, N, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Leader, H, Ashani, Y, Goldsmith, M, Greisen, P, Tawfik, D, Sussman, L.J.
Deposit date:2018-02-14
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Phosphotriesterase PTE_A53_4
To Be Published
5WBJ
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BU of 5wbj by Molmil
Crystal structure of the arabidopsis thaliana Raptor in complex with the TOS peptide of human 4EBP1
Descriptor: Eukaryotic translation initiation factor 4E-binding protein 1, Regulatory-associated protein of TOR 1
Authors:Pavletich, N.P, Jiang, X.
Deposit date:2017-06-29
Release date:2017-12-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
1RQA
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BU of 1rqa by Molmil
Crystallographic Analysis of the Interaction of Nitric Oxide with Quaternary-T Human Hemoglobin. Beta W73E hemoglobin exposed to NO under anaerobic conditions
Descriptor: Hemoglobin alpha chain, Hemoglobin beta chain, NITRIC OXIDE, ...
Authors:Chan, N.-L, Kavanaugh, J.S, Rogers, P.H, Arnone, A.
Deposit date:2003-12-04
Release date:2005-01-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystallographic analysis of the interaction of nitric oxide with quaternary-T human hemoglobin.
Biochemistry, 43, 2004
6IEY
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BU of 6iey by Molmil
Crystal structure of Chloramphenicol-Metabolizaing Enzyme EstDL136-Chloramphenicol complex
Descriptor: CHLORAMPHENICOL, Esterase
Authors:Kim, S.H, Kang, P.A, Han, K.T, Lee, S.W, Rhee, S.K.
Deposit date:2018-09-18
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Crystal structure of chloramphenicol-metabolizing enzyme EstDL136 from a metagenome.
PLoS ONE, 14, 2019
3CEH
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BU of 3ceh by Molmil
Human liver glycogen phosphorylase (tense state) in complex with the allosteric inhibitor AVE5688
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-[3-(2-Chloro-4,5-difluoro-benzoyl)ureido]-3-trifluoromethoxybenzoic acid, Glycogen phosphorylase, ...
Authors:Wendt, K.U, Dreyer, M.K, Anderka, O, Klabunde, T, Loenze, P, Defossa, E, Schmoll, D.
Deposit date:2008-02-29
Release date:2008-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Thermodynamic characterization of allosteric glycogen phosphorylase inhibitors.
Biochemistry, 47, 2008

224004

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