Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45910 results

7XIO
DownloadVisualize
BU of 7xio by Molmil
Crystal structure of TYR from Ralstonia
Descriptor: PHOSPHATE ION, Polyphenol oxidase
Authors:Sun, D.Y, Cui, P.P, Liao, L.J, Liu, X.K, Liu, B, Guo, Y, Feng, Z, Zhang, J, Li, X, Zeng, Z.X.
Deposit date:2022-04-13
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of TYR from Ralstonia
To Be Published
6CE9
DownloadVisualize
BU of 6ce9 by Molmil
Insulin Receptor ectodomain in complex with two insulin molecules
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Scapin, G, Dandey, V.P, Zhang, Z, Strickland, C, Potter, C.S, Carragher, B.
Deposit date:2018-02-11
Release date:2018-03-14
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the insulin receptor-insulin complex by single-particle cryo-EM analysis.
Nature, 556, 2018
2XQF
DownloadVisualize
BU of 2xqf by Molmil
X-ray Structure of human butyrylcholinesterase inhibited by racemic VX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Wandhammer, M, Carletti, E, Gillon, E, Masson, P, Goeldner, M, Noort, D, Nachon, F.
Deposit date:2010-09-02
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Study of the Complex Stereoselectivity of Human Butyrylcholinesterase for the Neurotoxic V-Agents.
J.Biol.Chem., 286, 2011
417D
DownloadVisualize
BU of 417d by Molmil
A THYMINE-LIKE BASE ANALOGUE FORMS WOBBLE PAIRS WITH ADENINE
Descriptor: DNA (5'-D(*CP*AP*CP*GP*(C46)P*G)-3')
Authors:Lin, P.K.T, Schuerman, M.H, Moore, G.S, Van Meervelt, L, Loakes, D, Brown, D.M, Moore, M.H.
Deposit date:1998-07-15
Release date:1998-09-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A thymine-like base analogue forms wobble pairs with adenine in a Z-DNA duplex.
J.Mol.Biol., 282, 1998
4NGQ
DownloadVisualize
BU of 4ngq by Molmil
Crystal Structure of Glutamate Carboxypeptidase II in a complex with urea-based inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Tykvart, J, Pachl, P.
Deposit date:2013-11-02
Release date:2014-06-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Rational design of urea-based glutamate carboxypeptidase II (GCPII) inhibitors as versatile tools for specific drug targeting and delivery.
Bioorg.Med.Chem., 22, 2014
1BAP
DownloadVisualize
BU of 1bap by Molmil
A PRO TO GLY MUTATION IN THE HINGE OF THE ARABINOSE-BINDING PROTEIN ENHANCES BINDING AND ALTERS SPECIFICITY: SUGAR-BINDING AND CRYSTALLOGRAPHIC STUDIES
Descriptor: L-ARABINOSE-BINDING PROTEIN, alpha-L-arabinopyranose, beta-L-arabinopyranose
Authors:Vermersch, P.S, Tesmer, J.J.G, Quiocho, F.A.
Deposit date:1991-11-15
Release date:1992-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Pro to Gly mutation in the hinge of the arabinose-binding protein enhances binding and alters specificity. Sugar-binding and crystallographic studies.
J.Biol.Chem., 265, 1990
4YZ3
DownloadVisualize
BU of 4yz3 by Molmil
Crystal Structure of Streptococcus pneumoniae NanC, in complex with Oseltamivir.
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, Neuraminidase, SULFATE ION
Authors:Lukacik, P, Owen, C.D, Potter, J.A, Taylor, G.L, Walsh, M.A.
Deposit date:2015-03-24
Release date:2016-04-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of Streptococcus pneumoniae NanC.
To Be Published
1KKT
DownloadVisualize
BU of 1kkt by Molmil
Structure of P. citrinum alpha 1,2-mannosidase reveals the basis for differences in specificity of the ER and Golgi Class I enzymes
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mannosyl-oligosaccharide alpha-1,2-mannosidase, ...
Authors:Lobsanov, Y.D, Vallee, F, Imberty, A, Yoshida, T, Yip, P, Herscovics, A, Howell, P.L.
Deposit date:2001-12-10
Release date:2002-01-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Penicillium citrinum alpha 1,2-mannosidase reveals the basis for differences in specificity of the endoplasmic reticulum and Golgi class I enzymes.
J.Biol.Chem., 277, 2002
4NEU
DownloadVisualize
BU of 4neu by Molmil
X-ray structure of Receptor Interacting Protein 1 (RIP1)kinase domain with a 1-aminoisoquinoline inhibitor
Descriptor: 1-[4-(1-aminoisoquinolin-5-yl)phenyl]-3-(5-tert-butyl-1,2-oxazol-3-yl)urea, MAGNESIUM ION, Receptor-interacting serine/threonine-protein kinase 1
Authors:Nolte, R.T, Ward, P, kahler, K.M, Campobasso, N.
Deposit date:2013-10-30
Release date:2013-11-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Discovery of Small Molecule RIP1 Kinase Inhibitors for the Treatment of Pathologies Associated with Necroptosis.
ACS Med Chem Lett, 4, 2013
4A3M
DownloadVisualize
BU of 4a3m by Molmil
RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with AMPCPP
Descriptor: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP* TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*GP*GP*A)-3', ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
5D08
DownloadVisualize
BU of 5d08 by Molmil
Crystal structure of selenomethionine-labeled epoxyqueuosine reductase
Descriptor: CHLORIDE ION, COBALAMIN, Epoxyqueuosine reductase, ...
Authors:Dowling, D.P, Miles, Z.D, Kohrer, C, Bandarian, V, Drennan, C.L.
Deposit date:2015-08-02
Release date:2016-09-28
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Molecular basis of cobalamin-dependent RNA modification.
Nucleic Acids Res., 44, 2016
3M2U
DownloadVisualize
BU of 3m2u by Molmil
Structural Insight into Methyl-Coenzyme M Reductase Chemistry using Coenzyme B Analogues
Descriptor: 1,2-ETHANEDIOL, 1-THIOETHANESULFONIC ACID, ACETATE ION, ...
Authors:Cedervall, P.E, Dey, M, Ragsdale, S.W, Wilmot, C.M.
Deposit date:2010-03-08
Release date:2010-09-15
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural insight into methyl-coenzyme M reductase chemistry using coenzyme B analogues.
Biochemistry, 49, 2010
5KJV
DownloadVisualize
BU of 5kjv by Molmil
Crystal structure of Coleus blumei HCT
Descriptor: Hydroxycinnamoyl transferase
Authors:Levsh, O, Chiang, Y.C, Tung, C.F, Noel, J.P, Wang, Y, Weng, J.K.
Deposit date:2016-06-20
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
Biochemistry, 55, 2016
4QF8
DownloadVisualize
BU of 4qf8 by Molmil
Crystal Structure of the Complex of Phospholipase A2 with Spermidine at 1.65 A Resolution
Descriptor: Phospholipase A2 VRV-PL-VIIIa, SPERMIDINE, SULFATE ION
Authors:Shukla, P.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-05-20
Release date:2014-06-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures and binding studies of the complexes of phospholipase A2 with five inhibitors
Biochim.Biophys.Acta, 1854, 2015
7XND
DownloadVisualize
BU of 7xnd by Molmil
Crystal structure of Phosphomevalonate kinase from Silkworm
Descriptor: GLYCEROL, Phosphomevalonate kinase
Authors:Guo, P.C, Zhang, H.
Deposit date:2022-04-28
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the substrate binding of phosphomevalonate kinase from the silkworm, Bombyx mori.
Insect Biochem.Mol.Biol., 150, 2022
5KUT
DownloadVisualize
BU of 5kut by Molmil
hMiro2 C-terminal GTPase domain, GDP-bound
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Mitochondrial Rho GTPase 2
Authors:Klosowiak, J.L, Focia, P.J, Rice, S.E, Freymann, D.M.
Deposit date:2016-07-13
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.693 Å)
Cite:Structural insights into Parkin substrate lysine targeting from minimal Miro substrates.
Sci Rep, 6, 2016
1KCM
DownloadVisualize
BU of 1kcm by Molmil
Crystal Structure of Mouse PITP Alpha Void of Bound Phospholipid at 2.0 Angstroms Resolution
Descriptor: Phosphatidylinositol Transfer Protein alpha
Authors:Schouten, A, Agianian, B, Westerman, J, Kroon, J, Wirtz, K.W.A, Gros, P.
Deposit date:2001-11-09
Release date:2002-05-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of apo-phosphatidylinositol transfer protein alpha provides insight into membrane association.
EMBO J., 21, 2002
5FPO
DownloadVisualize
BU of 5fpo by Molmil
Structure of Bacterial DNA Ligase with small-molecule ligand 1H- indazol-7-amine (AT4213) in an alternate binding site.
Descriptor: 1H-indazol-7-amine, DNA LIGASE
Authors:Jhoti, H, Ludlow, R.F, Pathuri, P, Saini, H.K, Tickle, I.J, Tisi, D, Verdonk, M, Williams, P.A.
Deposit date:2015-12-02
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Detection of Secondary Binding Sites in Proteins Using Fragment Screening.
Proc.Natl.Acad.Sci.USA, 112, 2015
4A3B
DownloadVisualize
BU of 4a3b by Molmil
RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Cheung, A.C.M, Sainsbury, S, Cramer, P.
Deposit date:2011-09-30
Release date:2011-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis of initial RNA polymerase II transcription.
EMBO J., 30, 2011
5KL9
DownloadVisualize
BU of 5kl9 by Molmil
Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with CoA
Descriptor: Acyl-CoA thioester hydrolase YbgC, COENZYME A, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-06-23
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of a putative acyl-CoA thioesterase EC709/ECK0725 from Escherichia coli in complex with CoA
To Be Published
6CH8
DownloadVisualize
BU of 6ch8 by Molmil
Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Heavy Chain, 35O22 Light Chain, ...
Authors:Barnes, C.O, Bjorkman, P.J.
Deposit date:2018-02-22
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structural characterization of a highly-potent V3-glycan broadly neutralizing antibody bound to natively-glycosylated HIV-1 envelope.
Nat Commun, 9, 2018
1UMX
DownloadVisualize
BU of 1umx by Molmil
PHOTOSYNTHETIC REACTION CENTER MUTANT WITH ARG M267 REPLACED WITH LEU (CHAIN M, R267L)
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN B, FE (III) ION, ...
Authors:Fyfe, P.K, Isaacs, N.W, Cogdell, R.J, Jones, M.R.
Deposit date:2003-09-02
Release date:2004-06-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Disruption of a specific molecular interaction with a bound lipid affects the thermal stability of the purple bacterial reaction centre.
Biochim.Biophys.Acta, 1608, 2004
4Z92
DownloadVisualize
BU of 4z92 by Molmil
crystal structure of parechovirus-1 virion
Descriptor: Capsid subunit VP3, RNA (5'-R(*AP*UP*UP*UP*UP*U)-3'), capsid subunit VP0, ...
Authors:Kalynych, S, Palkova, L, Plevka, P.
Deposit date:2015-04-09
Release date:2015-11-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Structure of Human Parechovirus 1 Reveals an Association of the RNA Genome with the Capsid.
J.Virol., 90, 2015
6H8F
DownloadVisualize
BU of 6h8f by Molmil
Fragment of the C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia
Descriptor: TssA
Authors:Dix, S.R, Owen, H.J, Sun, R, Ahmad, A, Shastri, S, Spiewak, H.L, Mosby, D.J, Harris, M.J, Batters, S.L, Brooker, T.A, Tzokov, S.B, Sedelnikova, S.E, Baker, P.J, Bullough, P.A, Rice, D.W, Thomas, M.S.
Deposit date:2018-08-02
Release date:2018-11-21
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural insights into the function of type VI secretion system TssA subunits.
Nat Commun, 9, 2018
4Z77
DownloadVisualize
BU of 4z77 by Molmil
Weak TCR binding to an unstable insulin epitope drives type 1 diabetes
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2015-04-06
Release date:2015-06-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Weak TCR binding to an unstable insulin epitope drives type 1 diabetes
To Be Published

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon