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PDB: 46375 results

8ZBE
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BU of 8zbe by Molmil
cryo-EM structure of the octreotide-bound SSTR5-Gi complex
Descriptor: Beta-2 adrenergic receptor,Somatostatin receptor type 5,lgbit (fusion protein), Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Li, Y.G, Meng, X.Y, Yang, X.R, Ling, S.L, Shi, P, Tian, C.L, Yang, F.
Deposit date:2024-04-26
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Structural insights into somatostatin receptor 5 bound with cyclic peptides.
Acta Pharmacol.Sin., 2024
3IC2
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BU of 3ic2 by Molmil
Crystal Structure of liganded hemoglobin in complex with a potent antisickling agent, INN-266
Descriptor: 4-[(5-methoxy-2-methylphenoxy)methyl]pyridine, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Safo, M.K, Musayev, F.N, Gandhi, A.K, Jorge, P.
Deposit date:2009-07-17
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and in Vitro Chracterization of Pyridyl Derivatives of Benzaldehydes: Highly Potent Antisickling Agents
To be Published
9BKT
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BU of 9bkt by Molmil
Crystal structure of rubredoxin from Pyrococcus furiosus reconstituted with FeSO4 solved by Fe/S-SAD
Descriptor: FE (II) ION, Rubredoxin
Authors:Zhou, D, Chen, L, Rose, J.P, Wang, B.C.
Deposit date:2024-04-29
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of rubredoxin from Pyrococcus furiosus reconstituted with FeSO4 solved by Fe/S-SAD
To Be Published
4L2I
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BU of 4l2i by Molmil
Electron transferring flavoprotein of Acidaminococcus fermentans: Towards a mechanism of flavin-based electron bifurcation
Descriptor: CHLORIDE ION, Electron transfer flavoprotein alpha subunit, Electron transfer flavoprotein alpha/beta-subunit, ...
Authors:Mowafy, A.M, Chowdhury, N.P, Demmer, J, Upadhyay, V, Kolzer, S, Jayamani, E, Kahnt, J, Demmer, U, Ermler, U, Buckel, W.
Deposit date:2013-06-04
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Studies on the Mechanism of Electron Bifurcation Catalyzed by Electron Transferring Flavoprotein (Etf) and Butyryl-CoA Dehydrogenase (Bcd) of Acidaminococcus fermentans.
J.Biol.Chem., 289, 2014
9EM9
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BU of 9em9 by Molmil
Structure of SynDLP MGD with GMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Slr0869 protein
Authors:Junglas, B, Gewehr, L, Schoennenbeck, P, Schneider, D, Sachse, C.
Deposit date:2024-03-07
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for GTPase activity and conformational changes of the bacterial dynamin-like protein SynDLP.
Cell Rep, 43, 2024
8VON
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BU of 8von by Molmil
Double phenylalanine Apex domain mutant of bacteriophage P2 central spike protein, membrane-piercing module
Descriptor: PHOSPHATIDYLETHANOLAMINE, Spike protein
Authors:Leiman, P.G, Miller, J.M.
Deposit date:2024-01-15
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Function of the bacteriophage P2 baseplate central spike Apex domain in the infection process.
bioRxiv, 2023
4LZ2
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BU of 4lz2 by Molmil
Crystal structure of the bromodomain of human BAZ2A
Descriptor: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2A, MAGNESIUM ION
Authors:Tallant, C, Nunez-Alonso, G, Picaud, S, Filippakopoulos, P, Krojer, T, Bradley, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-07-31
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Molecular basis of histone tail recognition by human TIP5 PHD finger and bromodomain of the chromatin remodeling complex NoRC.
Structure, 23, 2015
8VP7
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BU of 8vp7 by Molmil
UIC-13-BIF-A4(Dab) extension of UIC-1
Descriptor: ACETONITRILE, UIC-13-BIF-A4(Dab)
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
4OJA
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BU of 4oja by Molmil
Structure of Hydra Cu-Zn superoxide dismutase
Descriptor: COPPER (II) ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ...
Authors:Anupama, A, Ramaswamy, S, Sai Sudha, P.
Deposit date:2014-01-21
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.277 Å)
Cite:Structure of a Cu-Zn Superoxide dismutase at an evolutionary crossroad.
To be Published
6K80
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BU of 6k80 by Molmil
Crystal Structure of Drosophila melanogaster Dopamine N-Acetyltransferase in Complex with CoA and Tryptophol
Descriptor: 2-(1H-indol-3-yl)ethanol, ACETYL COENZYME *A, Dopamine N-acetyltransferase
Authors:Wu, C.Y, Hu, I.C, Yang, Y.C, Cheng, H.C, Lyu, P.C.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:An essential role of acetyl coenzyme A in the catalytic cycle of insect arylalkylamine N-acetyltransferase.
Commun Biol, 3, 2020
6Y7D
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BU of 6y7d by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H433A
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Zhang, L, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-02-28
Release date:2021-01-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A [3Cu:2S] cluster provides insight into the assembly and function of the Cu Z site of nitrous oxide reductase.
Chem Sci, 12, 2021
4OJK
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BU of 4ojk by Molmil
Structure of the cGMP Dependent Protein Kinase II and Rab11b Complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-11B, cGMP-dependent protein kinase 2
Authors:Reger, A.S, Yang, M.P, Guo, E, Kim, C.
Deposit date:2014-01-21
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.657 Å)
Cite:Crystal Structure of the cGMP-dependent Protein Kinase II Leucine Zipper and Rab11b Protein Complex Reveals Molecular Details of G-kinase-specific Interactions.
J.Biol.Chem., 289, 2014
6AF0
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BU of 6af0 by Molmil
Structure of Ctr9, Paf1 and Cdc73 ternary complex from Myceliophthora thermophila
Descriptor: Cdc73 protein, Ctr9 protein, Paf1 protein
Authors:Wang, Z, Deng, P, Zhou, Y.
Deposit date:2018-08-07
Release date:2018-09-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7NRW
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BU of 7nrw by Molmil
Human myelin protein P2 mutant M114T
Descriptor: CHLORIDE ION, MAGNESIUM ION, Myelin P2 protein, ...
Authors:Uusitalo, M, Ruskamo, S, Kursula, P.
Deposit date:2021-03-04
Release date:2021-09-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human myelin protein P2: from crystallography to time-lapse membrane imaging and neuropathy-associated variants.
Febs J., 288, 2021
8ZHN
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BU of 8zhn by Molmil
SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs (one RBD rotated)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H18 Fab, ...
Authors:Yan, Q, Gao, X, Liu, B, Hou, R, He, P, Li, Z, Chen, Q, Wang, J, He, J, Chen, L, Zhao, J, Xiong, X.
Deposit date:2024-05-11
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Antibodies utilizing VL6-57 light chains target a convergent cryptic epitope on SARS-CoV-2 spike protein helping to drive the genesis of Omicron variants
To Be Published
9F1K
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BU of 9f1k by Molmil
First bromodomain of BRD4 in complex with ISOX-DUAL based inhibitor 30
Descriptor: 1,2-ETHANEDIOL, 2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]-N-(2-methoxyethyl)ethanamide, Bromodomain-containing protein 4
Authors:Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2024-04-19
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:First bromodomain of BRD4 in complex with ISOX-DUAL based inhibitor 30
to be published
6GSF
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BU of 6gsf by Molmil
Solution structure of lipase binding domain LID1 of foldase from Pseudomonas aeruginosa
Descriptor: Lipase chaperone
Authors:Viegas, A, Jaeger, K.-E, Etzkorn, M, Gohlke, H, Verma, N, Dollinger, P, Kovacic, F.
Deposit date:2018-06-14
Release date:2018-12-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and dynamic insights revealing how lipase binding domain MD1 of Pseudomonas aeruginosa foldase affects lipase activation.
Sci Rep, 10, 2020
8ZHH
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BU of 8zhh by Molmil
SARS-CoV-2 spike trimer (6P) in complex with two H18 Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H18 Fab, ...
Authors:Yan, Q, Gao, X, Liu, B, Hou, R, He, P, Li, Z, Chen, Q, Wang, J, He, J, Chen, L, Zhao, J, Xiong, X.
Deposit date:2024-05-10
Release date:2024-08-21
Method:ELECTRON MICROSCOPY (5.55 Å)
Cite:Antibodies utilizing VL6-57 light chains target a convergent cryptic epitope on SARS-CoV-2 spike protein helping to drive the genesis of Omicron variants
To Be Published
3IGP
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BU of 3igp by Molmil
Structure of inhibitor binding to Carbonic Anhydrase II
Descriptor: 6,7-dimethoxy-3,4-dihydroisoquinoline-2(1H)-sulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Gitto, R, Agnello, S, Brynda, J, Mader, P, Supuran, C.T, Chimirri, A.
Deposit date:2009-07-28
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Identification of 3,4-Dihydroisoquinoline-2(1H)-sulfonamides as Potent Carbonic Anhydrase Inhibitors: Synthesis, Biological Evaluation, and Enzyme-Ligand X-ray Studies.
J.Med.Chem., 2010
1JXH
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BU of 1jxh by Molmil
4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium
Descriptor: PHOSPHOMETHYLPYRIMIDINE KINASE, SULFATE ION
Authors:Cheng, G, Bennett, E.M, Begley, T.P, Ealick, S.E.
Deposit date:2001-09-07
Release date:2002-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase from Salmonella typhimurium at 2.3 A resolution.
Structure, 10, 2002
9B76
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BU of 9b76 by Molmil
Crystal structure of humanized 44H10 Fab Version 21
Descriptor: ACETATE ION, POTASSIUM ION, h44H10-V21 Antibody, ...
Authors:Kassardjian, A, Julien, J.P.
Deposit date:2024-03-27
Release date:2024-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Humanization of Pan-HLA-DR mAb 44H10 Hinges on Critical Residues in the Antibody Framework.
Antibodies, 13, 2024
1JY5
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BU of 1jy5 by Molmil
RNase-related protein from Calystegia sepium
Descriptor: CalsepRRP
Authors:Rabijns, A, Verboven, C, Rouge, P, Barre, A, Van Damme, E.J.M, Peumans, W.J, De Ranter, C.J.
Deposit date:2001-09-11
Release date:2002-04-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of an RNase-related protein from Calystegia sepium.
Acta Crystallogr.,Sect.D, 58, 2002
8X1V
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BU of 8x1v by Molmil
NMR structure of a bimolecular parallel G-quadruplex formed by AAGGG repeats from pathogenic RFC1 gene
Descriptor: DNA (5'-D(*AP*AP*GP*GP*GP*AP*AP*GP*GP*GP*AP*A)-3')
Authors:Wang, Y, Guo, P, Han, D.
Deposit date:2023-11-08
Release date:2024-01-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural investigation of pathogenic RFC1 AAGGG pentanucleotide repeats reveals a role of G-quadruplex in dysregulated gene expression in CANVAS.
Nucleic Acids Res., 52, 2024
3IY0
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BU of 3iy0 by Molmil
Variable domains of the x-ray structure of Fab 14 fitted into the cryoEM reconstruction of the virus-Fab 14 complex
Descriptor: Fab 14, heavy domain, light domain
Authors:Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
Deposit date:2009-04-07
Release date:2009-05-12
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009
6TUB
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BU of 6tub by Molmil
Beta-endorphin amyloid fibril
Descriptor: Beta-endorphin
Authors:Verasdonck, J, Seuring, C, Gath, J, Ghosh, D, Nespovitaya, N, Waelti, M.A, Maji, S, Cadalbert, R, Boeckmann, A, Guentert, P, Meier, B.H, Riek, R.
Deposit date:2020-01-05
Release date:2020-10-28
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:The three-dimensional structure of human beta-endorphin amyloid fibrils.
Nat.Struct.Mol.Biol., 27, 2020

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