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PDB: 45910 results

8BOS
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BU of 8bos by Molmil
Transition state analogue complex of small G protein and its GAP effector
Descriptor: GTPase HRas, GUANIDINE, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Baumann, P, Jin, Y.
Deposit date:2022-11-15
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A small G protein with MgF3 TSA complex
To Be Published
4XUW
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Structure of the hazelnut allergen, Cor a 8
Descriptor: Non-specific lipid-transfer protein, PHOSPHATE ION
Authors:Offermann, L.R, Perdue, M.L, Bublin, M, Pfeifer, S, Dubiela, P, Hoffmann-Sommergruber, K, Chruszcz, M.
Deposit date:2015-01-26
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural and Functional Characterization of the Hazelnut Allergen Cor a 8.
J.Agric.Food Chem., 63, 2015
3IPB
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BU of 3ipb by Molmil
Human Transthyretin (TTR) complexed with a palindromic bivalent amyloid inhibitor (11 carbon linker).
Descriptor: 2,2'-{undecane-1,11-diylbis[oxy(3,5-dichlorobenzene-4,1-diyl)imino]}dibenzoic acid, Transthyretin
Authors:Kolstoe, S.E, Wood, S.P, Pepys, M.B.
Deposit date:2009-08-17
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Trapping of palindromic ligands within native transthyretin prevents amyloid formation.
Proc.Natl.Acad.Sci.USA, 107, 2010
5E0J
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BU of 5e0j by Molmil
1.20 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic (21-mer) inhibitor
Descriptor: (phenylmethyl) ~{N}-[(12~{S},15~{S},18~{S})-15-(cyclohexylmethyl)-12-(hydroxymethyl)-9,14,17-tris(oxidanylidene)-1,8,13,16,21,22-hexazabicyclo[18.2.1]tricosa-20(23),21-dien-18-yl]carbamate, CHLORIDE ION, Norovirus 3C-like protease
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Weerawarna, P.M, Kim, Y, Kankanamalage, A.C.G, Damalanka, V.C, Lushington, G.H, Alliston, K.R, Chang, K.-O, Groutas, W.C.
Deposit date:2015-09-28
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-based design and synthesis of triazole-based macrocyclic inhibitors of norovirus protease: Structural, biochemical, spectroscopic, and antiviral studies.
Eur.J.Med.Chem., 119, 2016
4OGI
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BU of 4ogi by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor BI-2536
Descriptor: 1,2-ETHANEDIOL, 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, Bromodomain-containing protein 4
Authors:Filippakopoulos, P, Picaud, S, Jose, B, Martin, S, Fedorov, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-01-16
Release date:2014-02-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Dual kinase-bromodomain inhibitors for rationally designed polypharmacology.
Nat.Chem.Biol., 10, 2014
3MP9
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BU of 3mp9 by Molmil
Structure of Streptococcal protein G B1 domain at pH 3.0
Descriptor: FORMIC ACID, Immunoglobulin G-binding protein G
Authors:Tomlinson, J.H, Green, V.L, Baker, P.J, Williamson, M.P.
Deposit date:2010-04-26
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural origins of pH-dependent chemical shifts in the B1 domain of protein G.
Proteins, 78, 2010
1EL5
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BU of 1el5 by Molmil
COMPLEX OF MONOMERIC SARCOSINE OXIDASE WITH THE INHIBITOR DIMETHYLGLYCINE
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, N,N-DIMETHYLGLYCINE, ...
Authors:Wagner, M.A, Trickey, P, Chen, Z.-W, Mathews, F.S, Jorns, M.S.
Deposit date:2000-03-13
Release date:2000-12-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Monomeric sarcosine oxidase: 1. Flavin reactivity and active site binding determinants.
Biochemistry, 39, 2000
8BTL
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BU of 8btl by Molmil
Crystal structure of a complex between the E2 conjugating enzyme UBE2A and the E3 ligase module from UBR4
Descriptor: Ubiquitin conjugating enzyme E2 A, ZINC ION, cDNA FLJ12511 fis, ...
Authors:Virdee, S, Mabbitt, P.D, Barnsby-Greer, L.
Deposit date:2022-11-29
Release date:2023-12-13
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:UBE2A and UBE2B are recruited by an atypical E3 ligase module in UBR4.
Nat.Struct.Mol.Biol., 31, 2024
6HS6
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BU of 6hs6 by Molmil
C-terminal domain of the TssA component of the type VI secretion system from Burkholderia cenocepacia
Descriptor: Type VI secretion protein ImpA
Authors:Dix, S.R, Owen, H.J, Sun, R, Ahmad, A, Shastri, S, Spiewak, H.L, Mosby, D.J, Harris, M.J, Batters, S.L, Brooker, T.A, Tzokov, S.B, Sedelnikova, S.E, Baker, P.J, Bullough, P.A, Rice, D.W, Thomas, M.S.
Deposit date:2018-09-28
Release date:2018-11-21
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structural insights into the function of type VI secretion system TssA subunits.
Nat Commun, 9, 2018
5E1G
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BU of 5e1g by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase 2 with carbapenem drug T208
Descriptor: (2~{S},3~{R},4~{R})-4-(2-cyclohexyloxy-2-oxidanylidene-ethyl)sulfanyl-3-methyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid, L,D-transpeptidase 2
Authors:Kumar, P, Lamichhane, G, Ginell, S.L.
Deposit date:2015-09-29
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Non-classical transpeptidases yield insight into new antibacterials.
Nat. Chem. Biol., 13, 2017
8BSY
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BU of 8bsy by Molmil
IPNS H270D variant in complex with Fe and ACV after 30s O2 exposure
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2022-11-26
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:IPNS H270D variant in complex with Fe and ACV after 30s O2 exposure
To Be Published
7PG2
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BU of 7pg2 by Molmil
Low resolution Cryo-EM structure of full-length insulin receptor bound to 3 insulin, conf 1
Descriptor: Insulin, Isoform Short of Insulin receptor
Authors:Nielsen, J.A, Slaaby, R, Boesen, T, Hummelshoj, T, Brandt, J, Schluckebier, G, Nissen, P.
Deposit date:2021-08-12
Release date:2022-02-02
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structural Investigations of Full-Length Insulin Receptor Dynamics and Signalling.
J.Mol.Biol., 434, 2022
4OCW
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BU of 4ocw by Molmil
Crystal structure of human Fab CAP256-VRC26.06, a potent V1V2-directed HIV-1 neutralizing antibody
Descriptor: CAP256-VRC26.06 heavy chain, CAP256-VRC26.06 light chain
Authors:Gorman, J, Doria-Rose, N.A, Schramm, C.A, Moore, P.L, Mascola, J.R, Shapiro, L, Morris, L, Kwong, P.D.
Deposit date:2014-01-09
Release date:2014-02-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Developmental pathway for potent V1V2-directed HIV-neutralizing antibodies.
Nature, 509, 2014
3MJN
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BU of 3mjn by Molmil
Crystal Structure of the complex of C-lobe of lactoferrin with isopropylamino-3-(1-naphthyloxy)propan-2-ol at 2.38 A Resolution
Descriptor: (1E,2R)-1-(ISOPROPYLIMINO)-3-(1-NAPHTHYLOXY)PROPAN-2-OL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, ...
Authors:Srivastava, K, Vikram, G, Kaushik, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-04-13
Release date:2010-06-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of the complex of C-lobe of lactoferrin with isopropylamino-3-(1-naphthyloxy)propan-2-ol at 2.38 A Resolution
To be Published
5E3C
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BU of 5e3c by Molmil
Structure of human DPP3 in complex with hemorphin like opioid peptide IVYPW
Descriptor: Dipeptidyl peptidase 3, IVYPW, MAGNESIUM ION, ...
Authors:Kumar, P, Reithofer, V, Reisinger, M, Pavkov-Keller, T, Wallner, S, Macheroux, P, Gruber, K.
Deposit date:2015-10-02
Release date:2016-04-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.765 Å)
Cite:Substrate complexes of human dipeptidyl peptidase III reveal the mechanism of enzyme inhibition.
Sci Rep, 6, 2016
6XNR
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BU of 6xnr by Molmil
Crystal structure of Rhagium Mordax antifreeze protein
Descriptor: 1,2-ETHANEDIOL, Antifreeze protein
Authors:Ye, Q, Eves, R, Campbell, R.L, Davies, P.L.
Deposit date:2020-07-04
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of an insect antifreeze protein reveals ordered waters on the ice-binding surface.
Biochem.J., 477, 2020
7Q5G
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BU of 7q5g by Molmil
LAN-DAP5 DERIVATIVE OF LANREOTIDE: L-DIAMINO PROPIONIC ACID IN POSITION 5 IN PLACE OF L-LYSINE
Descriptor: ETHANOL, LAN-DAP5 DERIVATIVE OF LANREOTIDE
Authors:Bressanelli, S, Le Du, M.H, Gobeaux, F, Legrand, P, Paternostre, M.
Deposit date:2021-11-03
Release date:2022-02-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:Atomic structure of Lanreotide nanotubes revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022
8BSX
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BU of 8bsx by Molmil
IPNS H270D variant in complex with Fe and ACV after 10 min O2 exposure
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2022-11-26
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:IPNS H270D variant in complex with Fe and ACV after 10 min O2 exposure
To Be Published
8BSW
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BU of 8bsw by Molmil
IPNS H270Q variant in complex with Fe and ACV under anaerobic conditions
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2022-11-29
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:IPNS H270Q variant in complex with Fe and ACV under anaerobic conditions
To Be Published
1EXE
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BU of 1exe by Molmil
SOLUTION STRUCTURE OF A MUTANT OF TRANSCRIPTION FACTOR 1.
Descriptor: TRANSCRIPTION FACTOR 1
Authors:Liu, W, Vu, H.M, Geiduschek, E.P, Kearns, D.R.
Deposit date:2000-05-02
Release date:2000-10-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a mutant of transcription factor 1: implications for enhanced DNA binding.
J.Mol.Biol., 302, 2000
7PG0
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BU of 7pg0 by Molmil
Low resolution Cryo-EM structure of full-length insulin receptor bound to 3 insulin with visible ddm micelle, conf 1
Descriptor: Insulin, Isoform Short of Insulin receptor
Authors:Nielsen, J.A, Slaaby, R, Boesen, T, Hummelshoj, T, Brandt, J, Schluckebier, G, Nissen, P.
Deposit date:2021-08-12
Release date:2022-02-02
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Structural Investigations of Full-Length Insulin Receptor Dynamics and Signalling.
J.Mol.Biol., 434, 2022
1ICG
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BU of 1icg by Molmil
STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[F]U IN PRESENCE OF IR(NH3)6+++
Descriptor: 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UFP))-3', CHLORIDE ION, IRIDIUM HEXAMMINE ION
Authors:Cruse, W, Saludjian, P, Neuman, A, Prange, T.
Deposit date:2001-03-31
Release date:2001-04-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues.
Acta Crystallogr.,Sect.D, 57, 2001
7UXL
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BU of 7uxl by Molmil
Crystal structure of malaria transmission-blocking antigen Pfs48/45-6C variant in complex with human antibodies RUPA-44 and RUPA-29
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gametocyte surface protein P45/48, RUPA-29 Fab Heavy chain, ...
Authors:Hailemariam, S, Ivanochko, D, Julien, J.P.
Deposit date:2022-05-05
Release date:2023-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Highly potent, naturally acquired human monoclonal antibodies against Pfs48/45 block Plasmodium falciparum transmission to mosquitoes.
Immunity, 56, 2023
8BSV
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BU of 8bsv by Molmil
IPNS H270D variant in complex with Fe and ACV under anaerobic conditions
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2022-11-29
Release date:2023-12-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:IPNS H270D variant in complex with Fe and ACV under anaerobic conditions
To Be Published
5HMM
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BU of 5hmm by Molmil
Crystal Structure of T5 D15 Protein Co-crystallized with Metal Ions
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Exodeoxyribonuclease, ...
Authors:Flemming, C.S, Sedelnikova, S.E, Rafferty, J.B, Sayers, J.R, Artymiuk, P.J.
Deposit date:2016-01-16
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Direct observation of DNA threading in flap endonuclease complexes.
Nat.Struct.Mol.Biol., 23, 2016

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