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PDB: 45697 results

343D
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BU of 343d by Molmil
STRUCTURAL PARAMETERS FROM SINGLE-CRYSTAL STRUCTURES FOR ACCURATE MODELS OF A-DNA
Descriptor: DNA (5'-D(*GP*(5CM)P*TP*AP*GP*C)-3')
Authors:Mooers, B.H.M, Eichman, B.F, Ho, P.S.
Deposit date:1997-06-26
Release date:1997-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Parameters from Single-Crystal Structures for Accurate Models of A-DNA
To be Published
6AJK
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BU of 6ajk by Molmil
Crystal structure of TFB1M and h45 in homo sapiens
Descriptor: Dimethyladenosine transferase 1, mitochondrial, RNA (28-MER)
Authors:Liu, X, Shen, S, Wu, P, Li, F, Wang, C, Gong, Q, Wu, J, Zhang, H, Shi, Y.
Deposit date:2018-08-28
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Structural insights into dimethylation of 12S rRNA by TFB1M: indispensable role in translation of mitochondrial genes and mitochondrial function.
Nucleic Acids Res., 47, 2019
4WVP
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BU of 4wvp by Molmil
Crystal structure of an activity-based probe HNE complex
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BTN-3V3-NLB-OMT-OIC-3V2, ...
Authors:Lechtenberg, B.C, Kasperkiewicz, P, Robinson, H.R, Drag, M, Riedl, S.J.
Deposit date:2014-11-06
Release date:2015-02-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:The Elastase-PK101 Structure: Mechanism of an Ultrasensitive Activity-based Probe Revealed.
Acs Chem.Biol., 10, 2015
1JKU
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BU of 1jku by Molmil
Crystal Structure of Manganese Catalase from Lactobacillus plantarum
Descriptor: CALCIUM ION, HYDROXIDE ION, MANGANESE (III) ION, ...
Authors:Barynin, V.V, Whittaker, M.M, Antonyuk, S.V, Lamzin, V.S, Harrison, P.M, Artymiuk, P.J, Whittaker, J.W.
Deposit date:2001-07-13
Release date:2002-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of manganese catalase from Lactobacillus plantarum.
Structure, 9, 2001
7P4N
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BU of 7p4n by Molmil
NMR solution structure of the C6 domain of von Willebrand Factor
Descriptor: von Willebrand factor
Authors:Hennig, J, Chen, P.-C, Simon, B.
Deposit date:2021-07-12
Release date:2022-07-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and dynamics of the von Willebrand Factor C6 domain.
J.Struct.Biol., 214, 2022
1RM4
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BU of 1rm4 by Molmil
Crystal structure of recombinant photosynthetic glyceraldehyde-3-phosphate dehydrogenase A4 isoform, complexed with NADP
Descriptor: Glyceraldehyde 3-phosphate dehydrogenase A, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Sparla, F, Fermani, S, Falini, G, Ripamonti, A, Sabatino, P, Pupillo, P, Trost, P.
Deposit date:2003-11-27
Release date:2004-07-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Coenzyme Site-directed Mutants of Photosynthetic A(4)-GAPDH Show Selectively Reduced NADPH-dependent Catalysis, Similar to Regulatory AB-GAPDH Inhibited by Oxidized Thioredoxin
J.Mol.Biol., 340, 2004
1PCJ
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BU of 1pcj by Molmil
Enzyme-ligand complex of P. aeruginosa PMM/PGM
Descriptor: 1-O-phosphono-alpha-D-mannopyranose, Phosphomannomutase, ZINC ION
Authors:Regni, C, Tipton, P.A, Beamer, L.J.
Deposit date:2003-05-16
Release date:2004-01-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of diverse substrate recognition by the enzyme PMM/PGM from P. aeruginosa.
Structure, 12, 2004
4HHT
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BU of 4hht by Molmil
T. maritima RNase H2 G21S in complex with nucleic acid substrate and calcium ions
Descriptor: CALCIUM ION, DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3'), ...
Authors:Rychlik, M.P, Nowotny, M.
Deposit date:2012-10-10
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:RNase H2 roles in genome integrity revealed by unlinking its activities.
Nucleic Acids Res., 41, 2013
5EXE
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BU of 5exe by Molmil
Crystal structure of oxalate oxidoreductase from Moorella thermoacetica bound with carboxy-TPP adduct
Descriptor: IRON/SULFUR CLUSTER, MAGNESIUM ION, Oxalate oxidoreductase subunit alpha, ...
Authors:Gibson, M.I, Chen, P.Y.-T, Drennan, C.L.
Deposit date:2015-11-23
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:One-carbon chemistry of oxalate oxidoreductase captured by X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 113, 2016
7PDI
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BU of 7pdi by Molmil
Crystal structure of the holo-acyl carrier protein (holo-AcpP) from Pseudomonas putida KT2440. Produced as an apo/holo mixture.
Descriptor: Acyl carrier protein
Authors:Venter, P, Sewell, B.T, Trindade, M, Mandyoli, L, van Zyl, L.
Deposit date:2021-08-05
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of the holo-acyl carrier protein (holo-AcpP) from Pseudomonas putida. Produced as an apo/holo mixture.
To Be Published
6VCG
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BU of 6vcg by Molmil
Crystal structure of Nitrosotalea devanaterra carotenoid cleavage dioxygenase, cobalt form
Descriptor: CHLORIDE ION, COBALT (II) ION, SODIUM ION, ...
Authors:Daruwalla, A, Shi, W, Kiser, P.D.
Deposit date:2019-12-20
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for carotenoid cleavage by an archaeal carotenoid dioxygenase.
Proc.Natl.Acad.Sci.USA, 117, 2020
5LPN
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BU of 5lpn by Molmil
Structure of human Rab10 in complex with the bMERB domain of Mical-1
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Protein-methionine sulfoxide oxidase MICAL1, ...
Authors:Rai, A, Oprisko, A, Campos, J, Fu, Y, Friese, T, Itzen, A, Goody, R.S, Mueller, M.P, Gazdag, E.M.
Deposit date:2016-08-14
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:bMERB domains are bivalent Rab8 family effectors evolved by gene duplication.
Elife, 5, 2016
1PCM
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BU of 1pcm by Molmil
Enzyme-ligand complex of P. aeruginosa PMM/PGM
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, Phosphomannomutase, ZINC ION
Authors:Regni, C, Tipton, P.A, Beamer, L.J.
Deposit date:2003-05-16
Release date:2004-01-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of diverse substrate recognition by the enzyme PMM/PGM from P. aeruginosa.
Structure, 12, 2004
6ED9
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BU of 6ed9 by Molmil
NMR structure for Sp1 transcription factor duplex 5'-d(TGGGCGGGA)
Descriptor: DNA (5'-D(*TP*CP*CP*CP*GP*CP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*GP*CP*GP*GP*GP*A)-3')
Authors:Davis, E.V, Hennig, M, Arya, D.P.
Deposit date:2018-08-09
Release date:2019-08-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences
To Be Published
4WST
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BU of 4wst by Molmil
The crystal structure of hemagglutinin from A/Taiwan/1/2013 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain
Authors:Yang, H, Carney, P.J, Chang, J, Villanueva, J.M, Stevens, J.
Deposit date:2014-10-28
Release date:2015-02-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and receptor binding preferences of recombinant hemagglutinins from avian and human h6 and h10 influenza a virus subtypes.
J.Virol., 89, 2015
6UQC
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BU of 6uqc by Molmil
Mouse IgG2a Bispecific Fc
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, F, Tsai, J.C, Davis, J.H, West, S.M, Strop, P.
Deposit date:2019-10-18
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Design and characterization of mouse IgG1 and IgG2a bispecific antibodies for use in syngeneic models.
Mabs, 12, 2019
1JP3
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BU of 1jp3 by Molmil
Structure of E.coli undecaprenyl pyrophosphate synthase
Descriptor: 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, undecaprenyl pyrophosphate synthase
Authors:Ko, T.P, Chen, Y.K, Robinson, H, Tsai, P.C, Gao, Y.G, Chen, A.P.C, Wang, A.H.J, Liang, P.H.
Deposit date:2001-07-31
Release date:2001-08-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of product chain length determination and the role of a flexible loop in Escherichia coli undecaprenyl-pyrophosphate synthase catalysis.
J.Biol.Chem., 276, 2001
7PN0
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BU of 7pn0 by Molmil
Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ribose-phosphate pyrophosphokinase, SULFATE ION
Authors:Timofeev, V.I, Abramchik, Y.A, Kostromina, M.A, Esipov, R.S, Kuranova, I.P.
Deposit date:2021-09-04
Release date:2021-09-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of the Phosphorybosylpyrophosphate synthetase II from Thermus thermophilus at R32 space group
To Be Published
5LRJ
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BU of 5lrj by Molmil
Crystal structure of the porcine carboxypeptidase B - Anabaenopeptin C complex
Descriptor: Anabaenopeptin C, Carboxypeptidase B, ZINC ION
Authors:Schreuder, H, Liesum, A, Loenze, P.
Deposit date:2016-08-19
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Isolation, Co-Crystallization and Structure-Based Characterization of Anabaenopeptins as Highly Potent Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (TAFIa).
Sci Rep, 6, 2016
1BMK
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BU of 1bmk by Molmil
THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB218655
Descriptor: 4-(FLUOROPHENYL)-1-CYCLOPROPYLMETHYL-5-(2-AMINO-4-PYRIMIDINYL)IMIDAZOLE, PROTEIN (MAP KINASE P38)
Authors:Wang, Z, Canagarajah, B, Boehm, J.C, Kassis, S, Cobb, M.H, Young, P.R, Abdel-Meguid, S, Adams, J.L, Goldsmith, E.J.
Deposit date:1998-07-23
Release date:1999-07-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of inhibitor selectivity in MAP kinases.
Structure, 6, 1998
5LS9
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BU of 5ls9 by Molmil
Humanized Archaeal ferritin
Descriptor: Ferritin, putative, MAGNESIUM ION
Authors:Baiocco, P, Trabuco, M.C, Boffi, A.
Deposit date:2016-08-23
Release date:2016-11-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Humanized archaeal ferritin as a tool for cell targeted delivery.
Nanoscale, 9, 2017
7PKP
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BU of 7pkp by Molmil
NSP2 RNP complex
Descriptor: Non-structural protein 2
Authors:Bravo, J.P.K, Borodavka, A.
Deposit date:2021-08-26
Release date:2021-09-29
Last modified:2021-10-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of rotavirus RNA chaperone displacement and RNA annealing.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DLK
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BU of 7dlk by Molmil
Crystal Structure of veratryl alcohol bound Dye Decolorizing peroxidase from Bacillus subtilis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Dhankhar, P, Dalal, V, Kumar, P.
Deposit date:2020-11-27
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of dye-decolorizing peroxidase from Bacillus subtilis in complex with veratryl alcohol.
Int.J.Biol.Macromol., 193, 2021
4Q8S
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BU of 4q8s by Molmil
Crystal structure of mammalian Peptidoglycan recognition protein PGRP-S with paranitrophenyl palmitate and N-acetyl glucosamine at 2.09 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-nitrophenyl hexadecanoate, GLYCEROL, ...
Authors:Yamini, S, Sharma, P, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-04-28
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of mammalian Peptidoglycan recognition protein PGRP-S with paranitrophenyl palmitate and N-acetyl glucosamine at 2.09 A resolution
To be Published
4LAJ
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BU of 4laj by Molmil
Crystal structure of HIV-1 YU2 envelope gp120 glycoprotein in complex with CD4-mimetic miniprotein, M48U1, and llama single-domain, broadly neutralizing, co-receptor binding site antibody, JM4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-AMINOHEXANOIC ACID, ...
Authors:Acharya, P, Luongo, T.S, Kwong, P.D.
Deposit date:2013-06-20
Release date:2013-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Heavy Chain-Only IgG2b Llama Antibody Effects Near-Pan HIV-1 Neutralization by Recognizing a CD4-Induced Epitope That Includes Elements of Coreceptor- and CD4-Binding Sites.
J.Virol., 87, 2013

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