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PDB: 45697 results

5RF3
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PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with Z1741970824
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, pyrimidin-5-amine
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-03-15
Release date:2020-03-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
5RFJ
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BU of 5rfj by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with PCM-0103067
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-(4-methoxy-1,3-benzothiazol-2-yl)acetamide
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-03-15
Release date:2020-03-25
Last modified:2021-02-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
5RFX
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BU of 5rfx by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with PCM-0102254
Descriptor: 1-[4-(4-methoxyphenyl)piperazin-1-yl]ethan-1-one, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-03-15
Release date:2020-03-25
Last modified:2021-02-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
2QPK
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BU of 2qpk by Molmil
Crystal structure of the complex of bovine lactoperoxidase with salicylhydroxamic acid at 2.34 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
Authors:Singh, A.K, Singh, N, Sharma, S, Kaur, P, Singh, T.P.
Deposit date:2007-07-24
Release date:2007-08-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure of bovine lactoperoxidase with a partially linked heme moiety at 1.98 angstrom resolution.
Biochim.Biophys.Acta, 1865, 2017
4UUJ
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BU of 4uuj by Molmil
POTASSIUM CHANNEL KCSA-FAB WITH TETRAHEXYLAMMONIUM
Descriptor: ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, COBALT (II) ION, ...
Authors:Lenaeus, M.J, Burdette, D, Wagner, T, Focia, P.J, Gross, A.
Deposit date:2014-07-29
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Kcsa in Complex with Symmetrical Quaternary Ammonium Compounds Reveal a Hydrophobic Binding Site.
Biochemistry, 53, 2014
8SSA
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BU of 8ssa by Molmil
Structure of AMPA receptor GluA2 complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to glutamate and channel blocker spermidine (desensitized state)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GLUTAMIC ACID, Glutamate receptor 2, ...
Authors:Gangwar, S.P, Yen, L.Y, Yelshanskaya, M.V, Sobolevsky, A.I.
Deposit date:2023-05-08
Release date:2023-09-06
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Modulation of GluA2-gamma 5 synaptic complex desensitization, polyamine block and antiepileptic perampanel inhibition by auxiliary subunit cornichon-2.
Nat.Struct.Mol.Biol., 30, 2023
6O11
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E. coli cysteine desulfurase SufS C364A with a Cys-aldimine intermediate
Descriptor: CHLORIDE ION, Cysteine desulfurase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
Authors:Dunkle, J.A, Frantom, P.A.
Deposit date:2019-02-17
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues.
J.Biol.Chem., 294, 2019
6TTO
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BU of 6tto by Molmil
N-terminally truncated hyoscyamine 6-hydroxylase (tH6H) in complex with 2-oxoglutarate
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, FORMIC ACID, ...
Authors:Kluza, A, Mrugala, B, Porebski, P.J, Kurpiewska, K, Niedzialkowska, E, Weiss, M.S, Borowski, T.
Deposit date:2019-12-29
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Regioselectivity of hyoscyamine 6 beta-hydroxylase-catalysed hydroxylation as revealed by high-resolution structural information and QM/MM calculations.
Dalton Trans, 49, 2020
8SSB
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BU of 8ssb by Molmil
Structure of LBD-TMD of AMPA receptor GluA2 in complex with auxiliary subunits TARP gamma-5 and cornichon-2 bound to glutamate and channel blocker spermidine (desensitized state)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, GLUTAMIC ACID, Glutamate receptor 2, ...
Authors:Gangwar, S.P, Yen, L.Y, Yelshanskaya, M.V, Sobolevsky, A.I.
Deposit date:2023-05-08
Release date:2023-09-06
Last modified:2023-10-25
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Modulation of GluA2-gamma 5 synaptic complex desensitization, polyamine block and antiepileptic perampanel inhibition by auxiliary subunit cornichon-2.
Nat.Struct.Mol.Biol., 30, 2023
8SZS
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BU of 8szs by Molmil
Cat DHX9 bound to GDP
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lee, Y.-T, Sickmier, E.A, Boriack-Sjodin, P.A.
Deposit date:2023-05-30
Release date:2023-09-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Development of assays to support identification and characterization of modulators of DExH-box helicase DHX9.
Slas Discov, 28, 2023
5XMR
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BU of 5xmr by Molmil
Plasmodium vivax SHMT(C346A) bound with PLP-glycine and GS395
Descriptor: (4~{S})-6-azanyl-3-methyl-4-[3-[4-(phenylmethyl)sulfonylphenyl]-5-(trifluoromethyl)phenyl]-4-propan-2-yl-2~{H}-pyrano[2 ,3-c]pyrazole-5-carbonitrile, CHLORIDE ION, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], ...
Authors:Chitnumsub, P, Jaruwat, A, Leartsakulpanich, U, Schwertz, G, Diederich, F.
Deposit date:2017-05-16
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Conformational Aspects in the Design of Inhibitors for Serine Hydroxymethyltransferase (SHMT): Biphenyl, Aryl Sulfonamide, and Aryl Sulfone Motifs
Chemistry, 23, 2017
7Y58
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BU of 7y58 by Molmil
CryoEM structure of QacA (D411N), an antibacterial efflux transporter from Staphylococcus aureus
Descriptor: Antiseptic resistance protein, Single-domain Indian camelid antibody (A4), single-domain indian camelid antibody(B7)
Authors:Penmatsa, A, Majumder, P.
Deposit date:2022-06-16
Release date:2023-07-12
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of antibacterial efflux transporter QacA from Staphylococcus aureus reveals a novel extracellular loop with allosteric role.
Embo J., 42, 2023
6ZBF
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BU of 6zbf by Molmil
Merozoite surface protein 1 (MSP-1) from Plasmodium falciparum, alternative conformation 3
Descriptor: Merozoite surface antigens, Merozoite surface protein 1, Merozoite surface protein-1
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
6TRC
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BU of 6trc by Molmil
Cryo- EM structure of the Thermosynechococcus elongatus photosystem I in the presence of cytochrome c6
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Koelsch, A, Radon, C, Baumert, A, Buerger, J, Mielke, T, Lisdat, F, Zouni, A, Wendler, P.
Deposit date:2019-12-18
Release date:2020-09-16
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Current limits of structural biology: The transient interaction between cytochrome c6 and photosystem I
Curr.Opin.Struct.Biol., 2, 2020
6ZBD
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BU of 6zbd by Molmil
Merozoite surface protein 1 (MSP-1) from Plasmodium falciparum, alternative conformation 2
Descriptor: Merozoite surface antigens, Merozoite surface protein 1, Merozoite surface protein-1
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
6ZBH
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BU of 6zbh by Molmil
Merozoite surface protein 1 (MSP-1) from Plasmodium falciparum, alternative conformation 5
Descriptor: Merozoite surface antigens, Merozoite surface protein 1, Merozoite surface protein-1
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
6ZBE
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BU of 6zbe by Molmil
Merozoite surface protein 1 (MSP-1) from Plasmodium falciparum, alternative conformation 1
Descriptor: Merozoite surface antigens, Merozoite surface protein 1, Merozoite surface protein-1
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
6ZBL
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BU of 6zbl by Molmil
Plasmodium falciparum merozoite surface protein 1 dimer, conformation 2
Descriptor: Merozoite surface protein-1, Precursor of the major merozoite surface antigens
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
3V6Q
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BU of 3v6q by Molmil
Crystal structure of the complex of bovine lactoperoxidase with Carbon monoxide at 2.0 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yamini, S, Singh, A.K, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-12-20
Release date:2012-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bovine carbonyl lactoperoxidase structure at 2.0 angstrom resolution and infrared spectra as a function of pH.
Protein J., 31, 2012
5RED
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BU of 5red by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with Z2856434865
Descriptor: 3C-like proteinase, 4-[2-(phenylsulfanyl)ethyl]morpholine, DIMETHYL SULFOXIDE
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-03-15
Release date:2020-03-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
6ZBG
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BU of 6zbg by Molmil
Merozoite surface protein 1 (MSP-1) from Plasmodium falciparum, alternative conformation 4
Descriptor: Merozoite surface antigens, Merozoite surface protein 1, Merozoite surface protein-1
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
6ZBC
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BU of 6zbc by Molmil
Merozoite surface protein 1 (MSP-1) from Plasmodium falciparum, main conformation
Descriptor: Merozoite surface antigens, Merozoite surface protein 1, Merozoite surface protein-1
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021
5REW
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BU of 5rew by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with PCM-0102275
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, N-[(1R)-1-(naphthalen-1-yl)ethyl]acetamide
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-03-15
Release date:2020-03-25
Last modified:2021-02-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
5RF5
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BU of 5rf5 by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with Z3241250482
Descriptor: 1,1-bis(oxidanylidene)thietan-3-ol, 3C-like proteinase, DIMETHYL SULFOXIDE
Authors:Fearon, D, Owen, C.D, Douangamath, A, Lukacik, P, Powell, A.J, Strain-Damerell, C.M, Resnick, E, Krojer, T, Gehrtz, P, Wild, C, Aimon, A, Brandao-Neto, J, Carbery, A, Dunnett, L, Skyner, R, Snee, M, London, N, Walsh, M.A, von Delft, F.
Deposit date:2020-03-15
Release date:2020-03-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease.
Nat Commun, 11, 2020
6ZBJ
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BU of 6zbj by Molmil
Plasmodium falciparum merozoite surface protein 1 dimer, conformation 1
Descriptor: Merozoite surface protein-1, Precursor of the major merozoite surface antigens
Authors:Dijkman, P.M, Kudryashev, M.
Deposit date:2020-06-08
Release date:2021-05-19
Last modified:2021-06-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the merozoite surface protein 1 from Plasmodium falciparum .
Sci Adv, 7, 2021

222415

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