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PDB: 45712 件

6YSN
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Human TRPC5 in complex with Pico145 (HC-608)
分子名称: 7-[(4-chlorophenyl)methyl]-3-methyl-1-(3-oxidanylpropyl)-8-[3-(trifluoromethyloxy)phenoxy]purine-2,6-dione, Maltose/maltodextrin-binding periplasmic protein,Short transient receptor potential channel 5
著者Wright, D.J, Johnson, R.M, Muench, S.P, Bon, R.S.
登録日2020-04-22
公開日2020-12-02
最終更新日2020-12-09
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Human TRPC5 structures reveal interaction of a xanthine-based TRPC1/4/5 inhibitor with a conserved lipid binding site.
Commun Biol, 3, 2020
7BLV
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Crystal structure of the tick-borne encephalitis virus NS3 helicase in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, NS3 helicase domain
著者Anindita, P.D, Grinkevich, P, Franta, Z.
登録日2021-01-19
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Mechanistic insight into the RNA-stimulated ATPase activity of tick-borne encephalitis virus helicase.
J.Biol.Chem., 298, 2022
5C9M
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The structure of oxidized rat cytochrome c (T28A) at 1.362 angstroms resolution.
分子名称: Cytochrome c, somatic, HEME C, ...
著者Edwards, B.F.P, Mahapatra, G, Vaishnav, A.A, Brunzelle, J.S, Huttemann, M.
登録日2015-06-28
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.362 Å)
主引用文献The structure of oxidized rat cytochrome c (T28A) at 1.362 angstroms resolution.
To Be Published
5F8G
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BU of 5f8g by Molmil
Enterovirus 71 Polymerase Elongation Complex (C1S1 Form)
分子名称: Genome polyprotein, RNA (35-MER), RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3'), ...
著者Shu, B, Gong, P.
登録日2015-12-09
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
5F8I
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Enterovirus 71 Polymerase Elongation Complex (C1S2/3 Form)
分子名称: CYTIDINE-5'-TRIPHOSPHATE, GLYCEROL, Genome polyprotein, ...
著者Shu, B, Gong, P.
登録日2015-12-09
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Structural basis of viral RNA-dependent RNA polymerase catalysis and translocation
Proc.Natl.Acad.Sci.USA, 113, 2016
6VR7
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BU of 6vr7 by Molmil
Structure of a pseudomurein peptide ligase type C from Methanothermus fervidus
分子名称: ACETOACETIC ACID, GLYCEROL, Mur ligase middle domain protein, ...
著者Carbone, V, Schofield, L.R, Sutherland-Smith, A.J, Ronimus, R.S, Subedi, B.P.
登録日2020-02-06
公開日2021-02-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Archaeal pseudomurein and bacterial murein cell wall biosynthesis share a common evolutionary ancestry
FEMS Microbes, 2, 2021
7LT2
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BU of 7lt2 by Molmil
Structure of a dsRNA-sensing cGAS-like receptor from the beetle Tribolium castaneum
分子名称: MANGANESE (II) ION, Mab-21 domain-containing protein
著者Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
登録日2021-02-18
公開日2021-07-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献cGAS-like receptors sense RNA and control 3'2'-cGAMP signalling in Drosophila.
Nature, 597, 2021
2W83
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Crystal structure of the ARF6 GTPase in complex with a specific effector, JIP4
分子名称: 1,4-DIETHYLENE DIOXIDE, ADP-RIBOSYLATION FACTOR 6, C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN 4, ...
著者Isabet, T, Montagnac, G, Regazzoni, K, Raynal, B, El Khadali, F, Franco, M, England, P, Chavrier, P, Houdusse, A, Menetrey, J.
登録日2009-01-08
公開日2009-07-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The Structural Basis of Arf Effector Specificity: The Crystal Structure of Arf6 in a Complex with Jip4.
Embo J., 28, 2009
7BM0
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BU of 7bm0 by Molmil
Crystal structure of the tick-borne encephalitis virus NS3 helicase in complex with AMPPNP
分子名称: MANGANESE (II) ION, NS3 helicase domain, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Anindita, P.D, Grinkevich, P, Franta, Z.
登録日2021-01-19
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanistic insight into the RNA-stimulated ATPase activity of tick-borne encephalitis virus helicase.
J.Biol.Chem., 298, 2022
8B04
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STRUCTURE OF PORCINE PANCREATIC ELASTASE BOUND TO A FRAGMENT OF AN ISOXAZOLONE INHIBITOR
分子名称: 2-cyclopropylcarbonyl-3-propan-2-yl-1,2-oxazol-5-one, CALCIUM ION, Chymotrypsin-like elastase family member 1, ...
著者Ferraroni, M, Giovannoni, P, Masini, V.
登録日2022-09-07
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray structural study of human neutrophil elastase inhibition with a series of azaindoles, azaindazoles and isoxazolones
J.Mol.Struct., 1274, 2023
6D1S
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BU of 6d1s by Molmil
Crystal structure of an apo chimeric human alpha1GABAA receptor
分子名称: chimeric alpha1GABAA receptor
著者Chen, Q, Arjunan, P, Cohen, A.E, Xu, Y, Tang, P.
登録日2018-04-12
公開日2018-08-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of neurosteroid anesthetic action on GABAAreceptors.
Nat Commun, 9, 2018
7XAM
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BU of 7xam by Molmil
Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth
分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Sengupta, J, Baid, P.
登録日2022-03-18
公開日2023-05-03
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM captures a unique conformational rearrangement in 23S rRNA helices of the Mycobacterium 50S subunit.
Int.J.Biol.Macromol., 253, 2023
5TS0
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Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2208
分子名称: (2S)-N-{(2S)-3-methoxy-1-[(naphthalen-1-ylmethyl)amino]-1-oxopropan-2-yl}-4-oxo-2-[(3-phenylpropanoyl)amino]-4-(1H-pyrrol-1-yl)butanamide (non-preferred name), Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-27
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.84679747 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
6Z23
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BU of 6z23 by Molmil
Acylenzyme complex of cefotaxime bound to deacylation mutant KPC-2 (E166Q)
分子名称: CEFOTAXIME, C3' cleaved, open, ...
著者Tooke, C.L, Hinchliffe, P, Spencer, J.
登録日2020-05-14
公開日2020-12-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Natural variants modify Klebsiella pneumoniae carbapenemase (KPC) acyl-enzyme conformational dynamics to extend antibiotic resistance.
J.Biol.Chem., 296, 2020
1GC1
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BU of 1gc1 by Molmil
HIV-1 GP120 CORE COMPLEXED WITH CD4 AND A NEUTRALIZING HUMAN ANTIBODY
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, CD4, ...
著者Kwong, P.D, Wyatt, R, Robinson, J, Sweet, R.W, Sodroski, J, Hendrickson, W.A.
登録日1998-06-15
公開日1998-07-08
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody.
Nature, 393, 1998
5FEZ
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BU of 5fez by Molmil
HydE from T. maritima in complex with (2R,4R)-MeSeTDA, 5'-deoxyadenosine and methionine
分子名称: (2~{R},4~{R})-2-methyl-1,3-selenazolidine-2,4-dicarboxylic acid, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, 5'-DEOXYADENOSINE, ...
著者Rohac, R, Amara, P, Benjdia, A, Martin, L, Ruffie, P, Favier, A, Berteau, O, Mouesca, J.M, Fontecilla-Camps, J.C, Nicolet, Y.
登録日2015-12-17
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Carbon-sulfur bond-forming reaction catalysed by the radical SAM enzyme HydE.
Nat.Chem., 8, 2016
6PPY
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Crystal structure of NeuNAc oxime complexed with NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis
分子名称: (2E,4S,5R,6R,7S,8R)-5-(acetylamino)-4,6,7,8,9-pentahydroxy-2-(hydroxyimino)nonanoic acid (non-preferred name), N-acetylneuraminate synthase
著者Rosanally, A.Z, Junop, M.J, Berti, P.J.
登録日2019-07-08
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献NeuNAc Oxime: A Slow-Binding and Effectively Irreversible Inhibitor of the Sialic Acid Synthase NeuB.
Biochemistry, 58, 2019
5TRS
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BU of 5trs by Molmil
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2144
分子名称: N-tert-butoxy-N~2~-(5-methyl-1,2-oxazole-3-carbonyl)-L-asparaginyl-O-methyl-N-[(naphthalen-1-yl)methyl]-L-serinamide, Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.-C, Fan, H, Singh, P.K, Wang, R, Sukenick, G, Nathan, C, Lin, G, Li, H.
登録日2016-10-27
公開日2017-01-11
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.083567 Å)
主引用文献Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome.
Biochemistry, 56, 2017
6ZHJ
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BU of 6zhj by Molmil
3D electron diffraction structure of thermolysin from Bacillus thermoproteolyticus
分子名称: CALCIUM ION, Thermolysin, ZINC ION
著者Blum, T, Housset, D, Clabbers, M.T.B, van Genderen, E, Schoehn, G, Ling, W.L, Abrahams, J.P.
登録日2020-06-23
公開日2021-01-27
最終更新日2024-01-24
実験手法ELECTRON CRYSTALLOGRAPHY (3.26 Å)
主引用文献Statistically correcting dynamical electron scattering improves the refinement of protein nanocrystals, including charge refinement of coordinated metals.
Acta Crystallogr D Struct Biol, 77, 2021
3DQB
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BU of 3dqb by Molmil
Crystal structure of the active G-protein-coupled receptor opsin in complex with a C-terminal peptide derived from the Galpha subunit of transducin
分子名称: 11meric peptide form Guanine nucleotide-binding protein G(t) subunit alpha-1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, ...
著者Scheerer, P, Park, J.H, Hildebrand, P.W, Kim, Y.J, Krauss, N, Choe, H.-W, Hofmann, K.P, Ernst, O.P.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of opsin in its G-protein-interacting conformation
Nature, 455, 2008
6ZHN
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3D electron diffraction structure of thaumatin from Thaumatococcus daniellii
分子名称: CHLORIDE ION, Thaumatin-1
著者Blum, T, Housset, D, Clabbers, M.T.B, van Genderen, E, Schoehn, G, Ling, W.L, Abrahams, J.P.
登録日2020-06-23
公開日2021-01-27
最終更新日2024-01-24
実験手法ELECTRON CRYSTALLOGRAPHY (2.76 Å)
主引用文献Statistically correcting dynamical electron scattering improves the refinement of protein nanocrystals, including charge refinement of coordinated metals.
Acta Crystallogr D Struct Biol, 77, 2021
6W10
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BU of 6w10 by Molmil
Structure of mouse TREX1 with E198K disease-associated mutation
分子名称: Three-prime repair exonuclease 1
著者Zhou, W, Mohr, L, Maciejowski, J, Kranzusch, P.J.
登録日2020-03-03
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.80003381 Å)
主引用文献cGAS phase separation inhibits TREX1-mediated DNA degradation and enhances cytosolic DNA sensing.
Mol.Cell, 81, 2021
8B1Y
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STRUCTURE OF PORCINE PANCREATIC ELASTASE BOUND TO A FRAGMENT OF A 5-AZAINDAZOLE INHIBITOR
分子名称: 1-cyclopropylcarbonylpyrazolo[4,3-c]pyridine-3-carbonitrile, CALCIUM ION, Chymotrypsin-like elastase family member 1, ...
著者Ferraroni, M, Giovannoni, P, Gerace, A.
登録日2022-09-12
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献X-ray structural study of human neutrophil elastase inhibition with a series of azaindoles, azaindazoles and isoxazolones
J.Mol.Struct., 1274, 2023
6CP5
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BU of 6cp5 by Molmil
Monomer yeast ATP synthase Fo reconstituted in nanodisc with inhibitor of oligomycin bound generated from focused refinement.
分子名称: ATP synthase protein 8, ATP synthase subunit 4, mitochondrial, ...
著者Srivastava, A.P, Luo, M, Symersky, J, Liao, M.F, Mueller, D.M.
登録日2018-03-13
公開日2018-04-11
最終更新日2020-01-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.
Science, 360, 2018
5OEW
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BU of 5oew by Molmil
Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with glutamate and positive allosteric modulator BPAM538
分子名称: 4-cyclopropyl-7-(3-methoxyphenoxy)-2,3-dihydro-1$l^{6},2,4-benzothiadiazine 1,1-dioxide, ACETATE ION, GLUTAMIC ACID, ...
著者Larsen, A.P, Frydenvang, K.A, Kastrup, J.S.
登録日2017-07-10
公開日2018-01-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献7-Phenoxy-Substituted 3,4-Dihydro-2H-1,2,4-benzothiadiazine 1,1-Dioxides as Positive Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors with Nanomolar Potency.
J. Med. Chem., 61, 2018

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件を2024-07-17に公開中

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