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PDB: 45697 件

7LNX
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I146A mutant of the isopentenyl phosphate kinase from Candidatus methanomethylophilus alvus
分子名称: (2E)-3-methylhept-2-en-1-yl dihydrogen phosphate, (2Z)-3-methylhept-2-en-1-yl trihydrogen diphosphate, ADENOSINE-5'-DIPHOSPHATE, ...
著者Thomas, L.M, Singh, S, Johnson, B.P.
登録日2021-02-08
公開日2021-12-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus .
Acs Chem.Biol., 17, 2022
5VJ0
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Crystal Structure of heme-containing DyP Type Peroxidase from Enterobacter lignolyticus
分子名称: Dyp-type peroxidase family, PROTOPORPHYRIN IX CONTAINING FE
著者Meekins, D.A, Li, P, Geisbrecht, B.V.
登録日2017-04-17
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects.
ACS Catal, 7, 2017
5VJS
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De Novo Photosynthetic Reaction Center Protein Equipped with Heme B, a synthetic Zn porphyrin, and Zn(II) cations
分子名称: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Reaction Center Maquette, ...
著者Ennist, N.M, Dutton, P.L, Stayrook, S.E, Moser, C.C.
登録日2017-04-19
公開日2018-04-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献De novo protein design of photochemical reaction centers.
Nat Commun, 13, 2022
7QU9
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Structure of aminodeoxychorismate synthase component 1 (PabB) from Bacillus subtilis spizizenii.
分子名称: Anthranilate synthase component I family protein, GLYCEROL, TRYPTOPHAN
著者Rooms, L.D, Race, P.R, Back, C.B, Burton, N.B, Willis, C.L, Stach, J.E.M, Duke, P.W, Hawkins, C.
登録日2022-01-17
公開日2023-01-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structure of aminodeoxychorismate synthase component 1 (PabB) from Bacillus subtilis spizizenii.
To Be Published
5VKB
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Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and argininamide
分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININEAMIDE, ...
著者Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
登録日2017-04-21
公開日2017-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.139 Å)
主引用文献Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
3UUB
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The GLIC pentameric Ligand-Gated Ion Channel Loop2-21' mutant reduced in solution
分子名称: CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, DODECYL-BETA-D-MALTOSIDE, ...
著者Sauguet, L, Nury, H, Corringer, P.J, Delarue, M.
登録日2011-11-28
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A locally closed conformation of a bacterial pentameric proton-gated ion channel.
Nat.Struct.Mol.Biol., 19, 2012
7QXV
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Crystal Structure of Haem-Binding Protein HemS Mutant F104A F199A, from Yersinia enterocolitica
分子名称: DI(HYDROXYETHYL)ETHER, Hemin transport protein
著者Barker, P.D, Keith, A, Brear, P, Wales, D.
登録日2022-01-27
公開日2023-02-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal Structure of Haem-Binding Protein HemS Mutant F104A F199A, from Yersinia enterocolitica
To Be Published
6KCM
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Crystal structure of Plasmodium falciparum HPPK-DHPS S436F/A437G/A613S with pterin and p-hydrobenzoate
分子名称: 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase-dihydropteroate synthase, ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Chitnumsub, P, Jaruwat, A, Yuthavong, Y.
登録日2019-06-28
公開日2020-02-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The structure of Plasmodium falciparum hydroxymethyldihydropterin pyrophosphokinase-dihydropteroate synthase reveals the basis of sulfa resistance.
Febs J., 287, 2020
3HA4
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BU of 3ha4 by Molmil
Crystal structure of the type one membrane protein MIX1 from Leishmania
分子名称: CARBONATE ION, MIX1
著者Gorman, M.A, Walsh, P.J, Parker, M.W.
登録日2009-05-01
公開日2010-05-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the Leishmania major MIX protein: A scaffold protein that mediates protein-protein interactions.
Protein Sci., 20, 2011
3UM8
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Wild-type Plasmodium falciparum DHFR-TS complexed with cycloguanil and NADPH
分子名称: 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine, Bifunctional dihydrofolate reductase-thymidylate synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Vanichtanankul, J, Chitnumsub, P, Kamchonwongpaisan, S, Yuthavong, Y.
登録日2011-11-12
公開日2012-07-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Combined Spatial Limitation around Residues 16 and 108 of Plasmodium falciparum Dihydrofolate Reductase Explains Resistance to Cycloguanil.
Antimicrob.Agents Chemother., 56, 2012
5CYO
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BU of 5cyo by Molmil
High resolution Septin 9 GTPase domain in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Septin-9
著者Matos, S.S, Leonardo, D.A, Pereira, H.M, Horjales, E, Araujo, A.P.U, Garratt, R.C.
登録日2015-07-30
公開日2016-08-03
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.0354 Å)
主引用文献A complete compendium of crystal structures for the human SEPT3 subgroup reveals functional plasticity at a specific septin interface
Iucrj, 2020
6KL8
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BU of 6kl8 by Molmil
Crystal structure of Piptidyl t-RNA hydrolase from Acinetobacter baumannii with bound NaCl at the substrate binding site
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Peptidyl-tRNA hydrolase, ...
著者Viswanathan, V, Sharma, P, Singh, P.K, Sharma, S, Singh, T.P.
登録日2019-07-29
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of Piptidyl t-RNA hydrolase from Acinetobacter baumannii with bound NaCl at the substrate binding site
To Be Published
3H7H
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BU of 3h7h by Molmil
Crystal structure of the human transcription elongation factor DSIF, hSpt4/hSpt5 (176-273)
分子名称: BETA-MERCAPTOETHANOL, Transcription elongation factor SPT4, Transcription elongation factor SPT5, ...
著者Wenzel, S, Wohrl, B.M, Rosch, P, Martins, B.M.
登録日2009-04-27
公開日2009-12-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the human transcription elongation factor DSIF hSpt4 subunit in complex with the hSpt5 dimerization interface
Biochem.J., 425, 2010
3HVT
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BU of 3hvt by Molmil
STRUCTURAL BASIS OF ASYMMETRY IN THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE HETERODIMER
分子名称: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
著者Steitz, T.A, Smerdon, S.J, Jaeger, J, Wang, J, Kohlstaedt, L.A, Chirino, A.J, Friedman, J.M, Rice, P.A.
登録日1994-07-25
公開日1994-10-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.Usa, 91, 1994
5D2H
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BU of 5d2h by Molmil
4-oxalocrotonate decarboxylase from Pseudomonas putida G7 - complexed with magnesium and alpha-ketoglutarate
分子名称: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, 4-oxalocrotonate decarboxylase NahK, ...
著者Guimaraes, S.L, Nagem, R.A.P.
登録日2015-08-05
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.936 Å)
主引用文献Crystal Structures of Apo and Liganded 4-Oxalocrotonate Decarboxylase Uncover a Structural Basis for the Metal-Assisted Decarboxylation of a Vinylogous beta-Keto Acid.
Biochemistry, 55, 2016
2GDR
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BU of 2gdr by Molmil
Crystal structure of a bacterial glutathione transferase
分子名称: GLUTATHIONE, glutathione S-transferase
著者Tocheva, E.I, Fortin, P.D, Eltis, L.D, Murphy, M.E.P.
登録日2006-03-16
公開日2006-08-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of Ternary Complexes of BphK, a Bacterial Glutathione S-Transferase That Reductively Dechlorinates Polychlorinated Biphenyl Metabolites.
J.Biol.Chem., 281, 2006
5VJU
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BU of 5vju by Molmil
De Novo Photosynthetic Reaction Center Protein Variant Equipped with His-Tyr H-bond, Heme B, and Cd(II) ions
分子名称: CADMIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Reaction Center Maquette Leu71His variant
著者Ennist, N.M, Stayrook, S.E, Dutton, P.L, Moser, C.C.
登録日2017-04-19
公開日2018-04-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献De novo protein design of photochemical reaction centers.
Nat Commun, 13, 2022
5VKL
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BU of 5vkl by Molmil
SPT6 tSH2-RPB1 1476-1500 pS1493
分子名称: DNA-directed RNA polymerase II subunit RPB1, Transcription elongation factor SPT6
著者Sdano, M.A, Whitby, F.G, Hill, C.P.
登録日2017-04-21
公開日2017-10-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.
Elife, 6, 2017
4OQP
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Structure of the effector-binding domain of deoxyribonucleoside regulator DeoR from Bacillus subtilis in complex with deoxyribose-5-phosphate
分子名称: CADMIUM ION, COBALT (II) ION, Deoxyribonucleoside regulator, ...
著者Rezacova, P, Skerlova, J.
登録日2014-02-10
公開日2014-06-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the effector-binding domain of deoxyribonucleoside regulator DeoR from Bacillus subtilis.
Febs J., 281, 2014
4OIT
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BU of 4oit by Molmil
Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis
分子名称: LysM domain protein, alpha-D-mannopyranose, beta-D-mannopyranose
著者Patra, D, Mishra, P, Surolia, A, Vijayan, M.
登録日2014-01-20
公開日2014-07-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structure, interactions and evolutionary implications of a domain-swapped lectin dimer from Mycobacterium smegmatis.
Glycobiology, 24, 2014
4OOA
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CRYSTAL STRUCTURE of NAF1 (MINER1): H114C THE REDOX-ACTIVE 2FE-2S PROTEIN
分子名称: CDGSH iron-sulfur domain-containing protein 2, FE2/S2 (INORGANIC) CLUSTER
著者Tamir, S, Eisenberg-Domovich, Y, Conlan, A.R, Stofleth, J.T, Lipper, C.H, Paddock, M.L, Mittler, R, Jennings, P.A, Livnah, O, Nechushtai, R.
登録日2014-01-31
公開日2014-07-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献A point mutation in the [2Fe-2S] cluster binding region of the NAF-1 protein (H114C) dramatically hinders the cluster donor properties.
Acta Crystallogr.,Sect.D, 70, 2014
5W2Y
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INFLUENZA VIRUS NEURAMINIDASE N9 IN COMPLEX WITH 9-DEOXYGENATED 2,3-DIFLUORO-N-ACETYLNEURAMINIC ACID
分子名称: (2R,3R,4R,5R,6R)-5-acetamido-6-[(1R,2R)-1,2-bis(oxidanyl)propyl]-2,3-bis(fluoranyl)-4-oxidanyl-oxane-2-carboxylic acid, (2~{R},3~{R},4~{R},5~{R})-3-acetamido-2-[(1~{R},2~{R})-1,2-bis(oxidanyl)propyl]-5-fluoranyl-4-oxidanyl-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Streltsov, V.A, Mckimm-Breschkin, J, Barrett, S, Pilling, P, Hader, S, Watt, A.G.
登録日2017-06-07
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural and Functional Analysis of Anti-Influenza Activity of 4-, 7-, 8- and 9-Deoxygenated 2,3-Difluoro- N-acetylneuraminic Acid Derivatives.
J. Med. Chem., 61, 2018
3V09
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Crystal structure of Rabbit Serum Albumin
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Majorek, K.A, Porebski, P.J, Chruszcz, M, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-12-07
公開日2012-01-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
Mol.Immunol., 52, 2012
4O87
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Crystal structure of a N-tagged Nuclease
分子名称: CITRIC ACID, N-tagged Nuclease, SULFATE ION
著者Chakravarty, A.K, Smith, P, Shuman, S.
登録日2013-12-26
公開日2014-10-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure, mechanism, and specificity of a eukaryal tRNA restriction enzyme involved in self-nonself discrimination.
Cell Rep, 7, 2014
4ODA
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BU of 4oda by Molmil
Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit D4 in complex with the A20 N-terminus
分子名称: DNA polymerase processivity factor component A20, GLYCEROL, SULFATE ION, ...
著者Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Iseni, F.
登録日2014-01-10
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit d4 in complex with the a20 N-terminal domain.
Plos Pathog., 10, 2014

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