Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45697 件

6ULP
DownloadVisualize
BU of 6ulp by Molmil
BRD3-BD2 in complex with the cyclic peptide 3.2_3
分子名称: Bromodomain-containing protein 3, Cyclic peptide 3.2_3
著者Patel, K, Walshe, J.L, Walport, L.J, Mackay, J.P.
登録日2019-10-08
公開日2020-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Cyclic peptides can engage a single binding pocket through highly divergent modes.
Proc.Natl.Acad.Sci.USA, 117, 2020
7Z31
DownloadVisualize
BU of 7z31 by Molmil
Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.7 A (focus subunit C11, no C11 C-terminal Zn-ribbon in the funnel pore).
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Nguyen, P.Q, Huecas, S, Plaza-Pegueroles, A, Fernandez-Tornero, C.
登録日2022-03-01
公開日2023-04-05
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
7AQ8
DownloadVisualize
BU of 7aq8 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583Y/D576A
分子名称: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
登録日2020-10-20
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.791 Å)
主引用文献Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
1PFK
DownloadVisualize
BU of 1pfk by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOFRUCTOKINASE FROM ESCHERICHIA COLI WITH ITS REACTION PRODUCTS
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Shirakihara, Y, Evans, P.R.
登録日1988-01-25
公開日1989-01-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction products.
J.Mol.Biol., 204, 1988
6XRI
DownloadVisualize
BU of 6xri by Molmil
MSMEG_2027 domain-swapped dimer
分子名称: Uncharacterized protein
著者Jackson, C.J, Antoney, J.P, Ahmed, F.H.
登録日2020-07-13
公開日2021-07-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Structure of F420-H2 dependent oxidoreductase MSMEG_2027 in dimeric apo form.
To Be Published
7Z30
DownloadVisualize
BU of 7z30 by Molmil
Structure of yeast RNA Polymerase III-Ty1 integrase complex at 2.9 A (focus subunit C11 terminal Zn-ribbon in the funnel pore).
分子名称: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
著者Nguyen, P.Q, Fernandez-Tornero, C.
登録日2022-03-01
公開日2023-04-05
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of Ty1 integrase tethering to RNA polymerase III for targeted retrotransposon integration.
Nat Commun, 14, 2023
6OOG
DownloadVisualize
BU of 6oog by Molmil
Crystal structure of triosephosphate isomerase from Taenia Solium in complex with 2PG
分子名称: 2-PHOSPHOGLYCOLIC ACID, SODIUM ION, Triosephosphate isomerase
著者Jimenez-Sandoval, P, Brieba, L.
登録日2019-04-23
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal structures of Triosephosphate Isomerases from Taenia solium and Schistosoma mansoni provide insights for vaccine rationale and drug design against helminth parasites.
Plos Negl Trop Dis, 14, 2020
2TUN
DownloadVisualize
BU of 2tun by Molmil
CONFORMATIONAL CHANGES IN THE (ALA-84-VAL) MUTANT OF TUMOR NECROSIS FACTOR
分子名称: TUMOR NECROSIS FACTOR-ALPHA
著者Saludjian, P, Prange, T.
登録日1993-10-06
公開日1994-01-31
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Conformational Changes in the (Ala-84-Val) Mutant of Tumor Necrosis Factor
To be Published
7Z9P
DownloadVisualize
BU of 7z9p by Molmil
The novel DNA binding mechanism of ridinilazole, a precision Clostridiodes difficile antibiotic
分子名称: DNA (5'-D(P*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G*(RID))-3'), Ridinilazole, SODIUM ION, ...
著者Mason, S, Leonard, P.M.
登録日2022-03-21
公開日2023-03-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Novel DNA Binding Mechanism of Ridinilazole, a Precision Clostridiodes difficile Antibiotic.
Antimicrob.Agents Chemother., 67, 2023
7AQ5
DownloadVisualize
BU of 7aq5 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583N
分子名称: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
登録日2020-10-20
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7D8T
DownloadVisualize
BU of 7d8t by Molmil
MITF bHLHLZ complex with M-box DNA
分子名称: DNA (5'-D(*TP*GP*TP*AP*AP*CP*AP*TP*GP*TP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*AP*CP*AP*CP*AP*TP*GP*TP*TP*AP*CP*AP*G)-3'), Microphthalmia-associated transcription factor,Methionyl-tRNA synthetase beta subunit
著者Guo, M, Fang, P, Wang, J.
登録日2020-10-09
公開日2021-10-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献A unique hyperdynamic dimer interface permits small molecule perturbation of the melanoma oncoprotein MITF for melanoma therapy.
Cell Res., 33, 2023
7AQ6
DownloadVisualize
BU of 7aq6 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583F
分子名称: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
登録日2020-10-20
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.514 Å)
主引用文献Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
6OJA
DownloadVisualize
BU of 6oja by Molmil
Crystal structure of the N. meningitides methionine-binding protein in its L-methionine bound conformation
分子名称: Lipoprotein, METHIONINE
著者Nguyen, P.T, Lai, J.Y, Kaiser, J.T, Rees, D.C.
登録日2019-04-11
公開日2019-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structures of the Neisseria meningitides methionine-binding protein MetQ in substrate-free form and bound to l- and d-methionine isomers.
Protein Sci., 28, 2019
6I3R
DownloadVisualize
BU of 6i3r by Molmil
Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1/2 of Drosophila helicase MLE
分子名称: Dosage compensation regulator
著者Jagtap, P.K.A, Buelow, S.v, Masiewicz, P, Simon, B, Hennig, J.
登録日2018-11-07
公開日2019-02-20
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure, dynamics and roX2-lncRNA binding of tandem double-stranded RNA binding domains dsRBD1,2 of Drosophila helicase Maleless.
Nucleic Acids Res., 47, 2019
6OK2
DownloadVisualize
BU of 6ok2 by Molmil
PilT4 from Geobacter metallireducens bound to ADP: C3ocococ conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, Twitching motility pilus retraction ATPase
著者McCallum, M, Howell, P.L.
登録日2019-04-12
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.287 Å)
主引用文献Multiple conformations facilitate PilT function in the type IV pilus.
Nat Commun, 10, 2019
6V7B
DownloadVisualize
BU of 6v7b by Molmil
Cryo-EM reconstruction of Pyrobaculum filamentous virus 2 (PFV2)
分子名称: A-DNA, Structural protein VP1, Structural protein VP2
著者Wang, F, Baquero, D.P, Su, Z, Prangishvili, D, Krupovic, M, Egelman, E.H.
登録日2019-12-08
公開日2020-04-01
最終更新日2020-05-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
Virus Evol, 6, 2020
7AQ7
DownloadVisualize
BU of 7aq7 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583Y
分子名称: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
登録日2020-10-20
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.608 Å)
主引用文献Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
6OMT
DownloadVisualize
BU of 6omt by Molmil
HIV-1 capsid hexamer R18D mutant
分子名称: Capsid protein
著者Huang, P, Summers, B.J, Xiong, Y.
登録日2019-04-19
公開日2019-08-21
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (2.052 Å)
主引用文献FEZ1 Is Recruited to a Conserved Cofactor Site on Capsid to Promote HIV-1 Trafficking.
Cell Rep, 28, 2019
7AW6
DownloadVisualize
BU of 7aw6 by Molmil
The extracellular region of CD33 with bound sialoside analogue P22
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-aminoethyl 5-{[(4-cyclohexyl-1H-1,2,3-triazol-1-yl)acetyl]amino}-3,5,9-trideoxy-9-[(4-hydroxy-3,5-dimethylbenzene-1-carbonyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranonosyl-(2->6)-beta-D-galactopyranosyl-(1->4)-beta-D-glucopyranoside, ...
著者Bradshaw, W.J, Katis, V.L, Thompson, A.P, Arrowsmith, C.H, Edwards, A.M, von Delft, F, Bountra, C, Gileadi, O.
登録日2020-11-06
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The extracellular region of CD33 with bound sialoside analogue P22
To Be Published
6YA6
DownloadVisualize
BU of 6ya6 by Molmil
Minimal construct of Cdc7-Dbf4 bound to XL413
分子名称: 8-chloro-2-[(2S)-pyrrolidin-2-yl][1]benzofuro[3,2-d]pyrimidin-4(3H)-one, BORIC ACID, CHLORIDE ION, ...
著者Dick, S.D, Cherepanov, P.
登録日2020-03-11
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural Basis for the Activation and Target Site Specificity of CDC7 Kinase.
Structure, 28, 2020
9FMD
DownloadVisualize
BU of 9fmd by Molmil
Integrative model of the human post-catalytic spliceosome (P-complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ...
著者Rothe, P, Plaschka, C, Vorlaender, M.K.
登録日2024-06-05
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism for the initiation of spliceosome disassembly.
Nature, 2024
6AME
DownloadVisualize
BU of 6ame by Molmil
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 M21A
分子名称: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
著者Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
登録日1999-01-24
公開日1999-04-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
1PCF
DownloadVisualize
BU of 1pcf by Molmil
HUMAN TRANSCRIPTIONAL COACTIVATOR PC4 C-TERMINAL DOMAIN
分子名称: TRANSCRIPTIONAL COACTIVATOR PC4
著者Brandsen, J, Gros, P.
登録日1997-09-09
公開日1998-03-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献C-terminal domain of transcription cofactor PC4 reveals dimeric ssDNA binding site.
Nat.Struct.Biol., 4, 1997
8CGW
DownloadVisualize
BU of 8cgw by Molmil
Insulin-regulated aminopeptidase (IRAP) in complex with an allosteric benzopyran-based inhibitor
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Stratikos, E, Giastas, P.
登録日2023-02-06
公開日2024-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Mechanisms of Allosteric Inhibition of Insulin-Regulated Aminopeptidase.
J.Mol.Biol., 436, 2024
7AQ3
DownloadVisualize
BU of 7aq3 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583D
分子名称: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
登録日2020-10-20
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.639 Å)
主引用文献Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon