Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 件

5WKS
DownloadVisualize
BU of 5wks by Molmil
Crystal structure of chalcone isomerase engineered from ancestral inference complexed with naringenin (ancR1)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Engineered Chalcone Isomerase ancR1, FORMIC ACID, ...
著者Burke, J.R, Kaltenbach, M, Tawfik, D.S, Noel, J.P.
登録日2017-07-25
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Evolution of chalcone isomerase from a noncatalytic ancestor.
Nat. Chem. Biol., 14, 2018
1RMR
DownloadVisualize
BU of 1rmr by Molmil
Crystal Structure of Schistatin, a Disintegrin Homodimer from saw-scaled Viper (Echis carinatus) at 2.5 A resolution
分子名称: Disintegrin schistatin
著者Bilgrami, S, Tomar, S, Yadav, S, Kaur, P, Kumar, J, Jabeen, T, Sharma, S, Singh, T.P.
登録日2003-11-28
公開日2004-06-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of schistatin, a disintegrin homodimer from saw-scaled viper (Echis carinatus) at 2.5 A resolution
J.Mol.Biol., 341, 2004
6FR8
DownloadVisualize
BU of 6fr8 by Molmil
HA1.7 Human T-Cell Receptor specific for Influenza virus epitope PKYVKQNTLKLAT presented by Human Leukocyte Antigen HLA-DR0101
分子名称: SULFATE ION, T-Cell Receptor HA1.7 alpha Chain, T-Cell Receptor HA1.7 beta Chain
著者Rizkallah, P.J, Cole, D.K.
登録日2018-02-15
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
6BA9
DownloadVisualize
BU of 6ba9 by Molmil
YbtT - Type II thioesterase from Yersiniabactin NRPS/PKS biosynthetic pathway- S89A mutant
分子名称: Iron aquisition yersiniabactin synthesis enzyme, YbtT
著者Brett, T.J, Kober, D.L, Ohlemacher, S.I, Henderson, J.P.
登録日2017-10-12
公開日2018-10-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献YbtT is a low-specificity type II thioesterase that maintains production of the metallophore yersiniabactin in pathogenic enterobacteria.
J. Biol. Chem., 293, 2018
5WKZ
DownloadVisualize
BU of 5wkz by Molmil
VH1-69 germline antibody predicted from CR6261
分子名称: Immunoglobulin heavy variable 1-69D,IgG H chain, Lambda-chain (AA -20 to 215), SULFATE ION
著者Lang, S, Lee, P.S.
登録日2017-07-25
公開日2018-08-01
最終更新日2019-12-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Anti-idiotypic antibody K1-18 engages VH1-69 precursor and affinity-matured, anti-stem antibodies through mimicry of the HA stem
To Be Published
6FUM
DownloadVisualize
BU of 6fum by Molmil
F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101
分子名称: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Human F11 T-Cell Receptor alpha chain, ...
著者Rizkallah, P.J, Cole, D.K.
登録日2018-02-27
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
5XZ5
DownloadVisualize
BU of 5xz5 by Molmil
Purification,crystallization and structural analysis of cytoplastic acetoacetyl-CoA thiolase from Saccharomyces cerevisiae
分子名称: Acetyl-CoA acetyltransferase
著者Zhou, P.F, Zhu, Z.L.
登録日2017-07-11
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Purification,crystallization and structural analysis of cytoplastic acetoacetyl-CoA thiolase from Saccharomyces cerevisiae
To Be Published
1RNR
DownloadVisualize
BU of 1rnr by Molmil
AUTOCATALYTIC GENERATION OF DOPA IN THE ENGINEERED PROTEIN R2 F208Y FROM ESCHERICHIA COLI RIBONUCLEOTIDE REDUCTASE AND CRYSTAL STRUCTURE OF THE DOPA-208 PROTEIN
分子名称: FE (III) ION, MERCURY (II) ION, RIBONUCLEOTIDE REDUCTASE R1 PROTEIN
著者Aberg, A, Nordlund, P.
登録日1993-04-26
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Autocatalytic generation of dopa in the engineered protein R2 F208Y from Escherichia coli ribonucleotide reductase and crystal structure of the dopa-208 protein.
Biochemistry, 32, 1993
2IUU
DownloadVisualize
BU of 2iuu by Molmil
P. aeruginosa FtsK motor domain, hexamer
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA TRANSLOCASE FTSK
著者Massey, T.H, Mercogliano, C.P, Yates, J, Sherratt, D.J, Lowe, J.
登録日2006-06-07
公開日2006-08-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Double-Stranded DNA Translocation: Structure and Mechanism of Hexameric Ftsk
Mol.Cell, 23, 2006
6BBE
DownloadVisualize
BU of 6bbe by Molmil
Structure of N-glycosylated porcine surfactant protein-D
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
登録日2017-10-18
公開日2018-05-23
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
6FVG
DownloadVisualize
BU of 6fvg by Molmil
The Structure of CK2alpha with CCh507 bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Casein kinase II subunit alpha, [1-[2-(phenylsulfonylamino)ethyl]piperidin-4-yl]methyl 1~{H}-indole-3-carboxylate
著者Brear, P, Prudent, R, Laudet, B, Filhol, O, Cochet, C, Sautel, C, Moucadel, V, Bestgen, B, Engel, M, Ettaoussi, M, Lomberget, T, Le Borgne, M, Kufareva, I, Abagyan, R, Hyvonen, M.
登録日2018-03-02
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of holoenzyme-disrupting chemicals as substrate-selective CK2 inhibitors.
Sci Rep, 9, 2019
6BBJ
DownloadVisualize
BU of 6bbj by Molmil
Xenopus Tropicalis TRPV4
分子名称: Transient receptor potential cation channel, subfamily V, member 4
著者Deng, Z, Hite, R.K, Yuan, P.
登録日2017-10-18
公開日2018-02-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM and X-ray structures of TRPV4 reveal insight into ion permeation and gating mechanisms.
Nat. Struct. Mol. Biol., 25, 2018
6HJO
DownloadVisualize
BU of 6hjo by Molmil
Myxococcus xanthus MglA bound to GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Mutual gliding-motility protein MglA
著者Varela, P.F, Cherfils, J.
登録日2018-09-04
公開日2019-12-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献MglA functions as a three-state GTPase to control movement reversals of Myxococcus xanthus.
Nat Commun, 10, 2019
6BCX
DownloadVisualize
BU of 6bcx by Molmil
mTORC1 structure refined to 3.0 angstroms
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Eukaryotic translation initiation factor 4E-binding protein 1, MAGNESIUM ION, ...
著者Pavletich, N.P, Yang, H.
登録日2017-10-20
公開日2017-12-20
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Mechanisms of mTORC1 activation by RHEB and inhibition by PRAS40.
Nature, 552, 2017
5DAU
DownloadVisualize
BU of 5dau by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V39E/V104E at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Skerritt, L.A, Bell-Upp, P.C, Robinson, A.C, Siegler, M.A, Schlessman, J.L, Garcia-Moreno E, B.
登録日2015-08-20
公開日2015-09-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS V39E/V104E at cryogenic temperature
To be Published
1JKE
DownloadVisualize
BU of 1jke by Molmil
D-Tyr tRNATyr deacylase from Escherichia coli
分子名称: D-Tyr-tRNATyr deacylase, ZINC ION
著者Ferri-Fioni, M.L, Schmitt, E, Soutourina, J, Plateau, P, Mechulam, Y, Blanquet, S.
登録日2001-07-12
公開日2002-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of crystalline D-Tyr-tRNA(Tyr) deacylase. A representative of a new class of tRNA-dependent hydrolases.
J.Biol.Chem., 276, 2001
6FW9
DownloadVisualize
BU of 6fw9 by Molmil
Crystal structure of L-tryptophan oxidase VioA from Chromobacterium violaceum in complex with 6-Fluoro-L-Tryptophan
分子名称: 6-FLUORO-L-TRYPTOPHAN, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent L-tryptophan oxidase VioA, ...
著者Lai, H.E, Morgan, M, Moore, S, Freemont, P.
登録日2018-03-05
公開日2019-02-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.739 Å)
主引用文献A GenoChemetic strategy for derivatization of the violacein natural product scaffold
Biorxiv, 2019
2J9O
DownloadVisualize
BU of 2j9o by Molmil
Structure of PBP-A, L158E mutant
分子名称: GLYCEROL, TLL2115 PROTEIN
著者Evrard, C, Declercq, J.P.
登録日2006-11-14
公開日2007-12-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of Pbp-A from Thermosynechococcus Elongatus, a Penicillin-Binding Protein Closely Related to Class a Beta-Lactamases.
J.Mol.Biol., 386, 2009
5DHK
DownloadVisualize
BU of 5dhk by Molmil
Nicotiana tabacum 5-epi-aristolochene synthase mutant W273E - alkylated
分子名称: 5-epi-aristolochene synthase, FARNESYL, MAGNESIUM ION
著者Noel, J.P, Kersten, R.K.
登録日2015-08-31
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Mechanism-Based Post-Translational Modification and Inactivation in Terpene Synthases.
Acs Chem.Biol., 10, 2015
5Y7C
DownloadVisualize
BU of 5y7c by Molmil
Hapalindole A and DMSPP Bound AmbP3
分子名称: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole A
著者Wong, C.P, Awakawa, T, Nakashima, Y.
登録日2017-08-16
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
3CPB
DownloadVisualize
BU of 3cpb by Molmil
Crystal structure of the VEGFR2 kinase domain in complex with a bisamide inhibitor
分子名称: N'-(6-aminopyridin-3-yl)-N-(2-cyclopentylethyl)-4-methyl-benzene-1,3-dicarboxamide, Vascular endothelial growth factor receptor 2
著者Whittington, D.A, Long, A.M, Rose, P, Gu, Y, Zhao, H.
登録日2008-03-31
公開日2008-06-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of Aryl Aminoquinazoline Pyridones as Potent, Selective, and Orally Efficacious Inhibitors of Receptor Tyrosine Kinase c-Kit.
J.Med.Chem., 51, 2008
2W0F
DownloadVisualize
BU of 2w0f by Molmil
Potassium Channel KcsA-Fab Complex with Tetraoctylammonium
分子名称: ANTIBODY FAB FRAGMENT HEAVY CHAIN, ANTIBODY FAB FRAGMENT LIGHT CHAIN, COBALT (II) ION, ...
著者Lenaeus, M.J, Focia, P.J, Wagner, T, Gross, A.
登録日2008-08-14
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of Kcsa in Complex with Symmetrical Quaternary Ammonium Compounds Reveal a Hydrophobic Binding Site.
Biochemistry, 53, 2014
2W0S
DownloadVisualize
BU of 2w0s by Molmil
Crystal structure of vaccinia virus thymidylate kinase bound to brivudin-5'-monophosphate
分子名称: (E)-5-(2-BROMOVINYL)-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
著者Caillat, C, Topalis, D, Agrofoglio, L.A, Pochet, S, Balzarini, J, Deville-Bonne, D, Meyer, P.
登録日2008-10-08
公開日2008-10-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.918 Å)
主引用文献Crystal Structure of Poxvirus Thymidylate Kinase: An Unexpected Dimerization Has Implications for Antiviral Therapy
Proc.Natl.Acad.Sci.USA, 105, 2008
4LCH
DownloadVisualize
BU of 4lch by Molmil
Crystal structure of the Pseudomonas aeruginosa LPXC/LPC-051 complex
分子名称: (betaS)-Nalpha-{4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]benzoyl}-N,beta-dihydroxy-beta-methyl-L-tyrosinamide, NITRATE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ...
著者Lee, C.-J, Zhou, P.
登録日2013-06-21
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.596 Å)
主引用文献Synthesis, Structure, and Antibiotic Activity of Aryl-Substituted LpxC Inhibitors.
J.Med.Chem., 56, 2013
2JDM
DownloadVisualize
BU of 2jdm by Molmil
Mutant (S22A) of Pseudomonas aeruginosa lectin II (PA-IIL) complexed with methyl-a-L-fucopyranoside
分子名称: CALCIUM ION, FUCOSE-BINDING LECTIN PA-IIL, SULFATE ION, ...
著者Adam, J, Pokorna, M, Sabin, C, Mitchell, E.P, Imberty, A, Wimmerova, M.
登録日2007-01-11
公開日2007-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Engineering of Pa-Iil Lectin from Pseudomonas Aeruginosa - Unravelling the Role of the Specificity Loop for Sugar Preference.
Bmc Struct.Biol., 7, 2007

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon