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PDB: 45712 results

5LVW
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BU of 5lvw by Molmil
XiaF (FADH2) from Streptomyces sp.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, INDOLE, SULFATE ION, ...
Authors:Kugel, S, Baunach, M, Baer, P, Ishida-Ito, M, Sundaram, S, Xu, Z, Groll, M, Hertweck, C.
Deposit date:2016-09-14
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cryptic indole hydroxylation by a non-canonical terpenoid cyclase parallels bacterial xenobiotic detoxification.
Nat Commun, 8, 2017
6T66
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BU of 6t66 by Molmil
Crystal structure of the Vibrio cholerae replicative helicase (DnaB) with GDP-AlF4
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Replicative DNA helicase, ...
Authors:Legrand, P, Quevillon-Cheruel, S, Li de la Sierra-Gallay, I, Walbott, H.
Deposit date:2019-10-17
Release date:2021-04-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase.
Nucleic Acids Res., 49, 2021
6FIU
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BU of 6fiu by Molmil
Human cytosolic 5'-nucleotidase II soaked with 10mM 2-(6-([1,1'-Biphenyl]-3-carboxamido)-9H-purin-9-yl)acetic acid
Descriptor: Cytosolic purine 5'-nucleotidase, GLYCEROL, MAGNESIUM ION, ...
Authors:Aghajari, N, Preeti, P.
Deposit date:2018-01-19
Release date:2019-01-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lead optimization and biological evaluation of fragment-based cN-II inhibitors.
Eur J Med Chem, 168, 2019
5KOS
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BU of 5kos by Molmil
Discovery of TAK-272: A Novel, Potent and Orally Active Renin In-hibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-~{tert}-butyl-4-(3-methoxypropylamino)-~{N}-(2-methylpropyl)-~{N}-[(3~{S},5~{R})-5-morpholin-4-ylcarbonylpiperidin-3-yl]pyrimidine-5-carboxamide, DI(HYDROXYETHYL)ETHER, ...
Authors:Snell, G.P, Behnke, C.A, Okada, K, Hideyuki, O, Sang, B.-C, Lane, W.
Deposit date:2016-07-01
Release date:2016-11-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Discovery of TAK-272: A Novel, Potent, and Orally Active Renin Inhibitor.
Acs Med.Chem.Lett., 7, 2016
3J15
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BU of 3j15 by Molmil
Model of ribosome-bound archaeal Pelota and ABCE1
Descriptor: ABC transporter ATP-binding protein, ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, ...
Authors:Becker, T, Franckenberg, S, Wickles, S, Shoemaker, C.J, Anger, A.M, Armache, J.-P, Sieber, H, Ungewickell, C, Berninghausen, O, Daberkow, I, Karcher, A, Thomm, M, Hopfner, K.-P, Green, R, Beckmann, R.
Deposit date:2011-12-12
Release date:2012-02-22
Last modified:2018-08-22
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structural basis of highly conserved ribosome recycling in eukaryotes and archaea.
Nature, 482, 2012
3J06
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BU of 3j06 by Molmil
CryoEM Helical Reconstruction of TMV
Descriptor: 5'-R(P*AP*UP*G)-3', Coat protein
Authors:Ge, P, Zhou, Z.H.
Deposit date:2011-04-26
Release date:2011-06-01
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Hydrogen-bonding networks and RNA bases revealed by cryo electron microscopy suggest a triggering mechanism for calcium switches.
Proc.Natl.Acad.Sci.USA, 108, 2011
6FII
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BU of 6fii by Molmil
Tubulin-Spongistatin complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Menchon, G, Prota, A.E, Lucena Angell, D, Bucher, P, Mueller, R, Paterson, I, Diaz, J.F, Altmann, K.-H, Steinmetz, M.O.
Deposit date:2018-01-18
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:A fluorescence anisotropy assay to discover and characterize ligands targeting the maytansine site of tubulin.
Nat Commun, 9, 2018
8P8J
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BU of 8p8j by Molmil
Structure of 5D3-Fab and nanobody(Nb96)-bound ABCG2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ...
Authors:Irobalieva, R.N, Manolaridis, I, Jackson, S.M, Ni, D, Pardon, E, Stahlberg, H, Steyaert, J, Locher, K.P.
Deposit date:2023-06-01
Release date:2023-08-30
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structural Basis of the Allosteric Inhibition of Human ABCG2 by Nanobodies.
J.Mol.Biol., 435, 2023
1GNK
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BU of 1gnk by Molmil
GLNK, A SIGNAL PROTEIN FROM E. COLI
Descriptor: PROTEIN (GLNK), SULFATE ION
Authors:Xu, Y, Cheah, E, Carr, P.D, Vanheeswijk, W.C, Westerhoff, H.V, Vasudevan, S.G, Ollis, D.L.
Deposit date:1998-07-14
Release date:1999-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:GlnK, a PII-homologue: structure reveals ATP binding site and indicates how the T-loops may be involved in molecular recognition.
J.Mol.Biol., 282, 1998
5KMU
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BU of 5kmu by Molmil
CTX-M-9 beta lactamase mutant - T165W
Descriptor: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Latallo, M, Faham, S, Kasson, P.M.
Deposit date:2016-06-27
Release date:2017-08-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Predicting allosteric mutants that increase activity of a major antibiotic resistance enzyme.
Chem Sci, 8, 2017
5FGJ
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BU of 5fgj by Molmil
Structure of tetrameric rat phenylalanine hydroxylase, residues 1-453
Descriptor: FE (III) ION, MAGNESIUM ION, Phenylalanine-4-hydroxylase
Authors:Taylor, A.B, Roberts, K.M, Fitzpatrick, P.F.
Deposit date:2015-12-20
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Domain Movements upon Activation of Phenylalanine Hydroxylase Characterized by Crystallography and Chromatography-Coupled Small-Angle X-ray Scattering.
J.Am.Chem.Soc., 138, 2016
8F11
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BU of 8f11 by Molmil
T4 lysozyme with a 2,6-diazaadamantane nitroxide (DZD) spin label
Descriptor: 1-[(1r,3r,5r,7r)-6-hydroxy-2,6-diazatricyclo[3.3.1.1~3,7~]decan-2-yl]ethan-1-one, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Wilson, M.A, Madzelan, P, Rajca, A, Stein, R, Yang, Z.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Cucurbit[7]uril Enhances Distance Measurements of Spin-Labeled Proteins.
J.Am.Chem.Soc., 145, 2023
1XKG
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BU of 1xkg by Molmil
Crystal structure of the major house dust mite allergen Der p 1 in its pro form at 1.61 A resolution
Descriptor: GLYCEROL, Major mite fecal allergen Der p 1, SULFATE ION, ...
Authors:Meno, K, Thorsted, P.B, Gajhede, M.
Deposit date:2004-09-29
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The crystal structure of recombinant proDer p 1, a major house dust mite proteolytic allergen.
J.Immunol., 175, 2005
4TLW
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BU of 4tlw by Molmil
CARDS TOXIN, FULL-LENGTH
Descriptor: ADP-ribosylating toxin CARDS
Authors:Becker, A, GALALELDEEN, A, Taylor, A.B, Hart, P.J.
Deposit date:2014-05-30
Release date:2015-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure of CARDS toxin, a unique ADP-ribosylating and vacuolating cytotoxin from Mycoplasma pneumoniae.
Proc.Natl.Acad.Sci.USA, 112, 2015
5KQQ
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BU of 5kqq by Molmil
Crystal structure of the W153F variant of catalase-peroxidase from B. pseudomallei treated
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Catalase-peroxidase, OXYGEN MOLECULE, ...
Authors:Loewen, P.C.
Deposit date:2016-07-06
Release date:2017-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of the W153F variant of catalase-peroxidase of B. pseudomallei at 1.87 Angstroms.
To be published
6FES
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BU of 6fes by Molmil
Crystal structure of novel repeat protein BRIC2 fused to DARPin D12
Descriptor: 1,2-ETHANEDIOL, D12_BRIC2, a synthetic protein,D12_BRIC2, ...
Authors:ElGamacy, M, Coles, M, Ernst, P, Zhu, H, Hartmann, M.D, Plueckthun, A, Lupas, A.
Deposit date:2018-01-03
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:An Interface-Driven Design Strategy Yields a Novel, Corrugated Protein Architecture.
ACS Synth Biol, 7, 2018
4TOF
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BU of 4tof by Molmil
1.65A resolution structure of BfrB (C89S, K96C) crystal form 1 from Pseudomonas aeruginosa
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Bacterioferritin, POTASSIUM ION, ...
Authors:Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
Deposit date:2014-06-05
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
8HGI
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BU of 8hgi by Molmil
Crystal structure of VNAR aGFP14 in complex with GFP
Descriptor: GFP, VNAR aGFP14, [2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID
Authors:Zheng, P, Zhu, C, Jin, T.
Deposit date:2022-11-14
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Selection, identification and crystal structure of shark-derived single-domain antibodies against a green fluorescent protein.
Int.J.Biol.Macromol., 247, 2023
2XN2
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BU of 2xn2 by Molmil
Structure of alpha-galactosidase from Lactobacillus acidophilus NCFM with galactose
Descriptor: ALPHA-GALACTOSIDASE, GLYCEROL, IMIDAZOLE, ...
Authors:Fredslund, F, Abou Hachem, M, Larsen, R.J, Sorensen, P.G, Lo Leggio, L, Svensson, B.
Deposit date:2010-07-30
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal Structure of Alpha-Galactosidase from Lactobacillus Acidophilus Ncfm: Insight Into Tetramer Formation and Substrate Binding.
J.Mol.Biol., 412, 2011
6BYE
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BU of 6bye by Molmil
Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose
Descriptor: ACETATE ION, Beta-mannosidase, beta-D-mannopyranose
Authors:Domingues, M.N, Vieira, P.S, Morais, M.A.B, Murakami, M.T.
Deposit date:2017-12-20
Release date:2018-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.126 Å)
Cite:Structural basis of exo-beta-mannanase activity in the GH2 family.
J. Biol. Chem., 293, 2018
1GLL
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BU of 1gll by Molmil
ESCHERICHIA COLI GLYCEROL KINASE MUTANT WITH BOUND ATP ANALOG SHOWING SUBSTANTIAL DOMAIN MOTION
Descriptor: GLYCEROL, GLYCEROL KINASE, MAGNESIUM ION, ...
Authors:Bystrom, C.E, Pettigrew, D.W, Branchaud, B.P, Remington, S.J.
Deposit date:1998-09-24
Release date:1999-05-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Escherichia coli glycerol kinase variant S58-->W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion.
Biochemistry, 38, 1999
6U7Q
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BU of 6u7q by Molmil
NMR solution structure of SFTI-R10
Descriptor: GLY-ARG-CYS-THR-LYS-SER-ILE-PRO-PRO-ARG-CYS-PHE-PRO-ASP inhibitor
Authors:White, A.M, Harvey, P.J, Durek, T, Craik, D.J.
Deposit date:2019-09-03
Release date:2020-04-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Application and Structural Analysis of Triazole-Bridged Disulfide Mimetics in Cyclic Peptides.
Angew.Chem.Int.Ed.Engl., 59, 2020
1GIW
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BU of 1giw by Molmil
SOLUTION STRUCTURE OF REDUCED HORSE HEART CYTOCHROME C, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: CYTOCHROME C, HEME C
Authors:Banci, L, Bertini, I, Huber, J.G, Spyroulias, G.A, Turano, P.
Deposit date:1998-06-17
Release date:1998-12-09
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of reduced horse heart cytochrome c.
J.Biol.Inorg.Chem., 4, 1999
4C38
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BU of 4c38 by Molmil
PKA-S6K1 Chimera with compound 21e (CCT239066) bound
Descriptor: 4-(1-ethyl-6-methyl-imidazo[4,5-c]pyridin-2-yl)-1,2,5-oxadiazol-3-amine, CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR PEPTIDE, ...
Authors:Couty, S, Westwood, I.M, Kalusa, A, Cano, C, Travers, J, Boxall, K, Chow, C.L, Burns, S, Schmitt, J, Pickard, L, Barillari, C, McAndrew, P.C, Clarke, P.A, Linardopoulos, S, Griffin, R.J, Aherne, G.W, Raynaud, F.I, Workman, P, Jones, K, van Montfort, R.L.M.
Deposit date:2013-08-21
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The discovery of potent ribosomal S6 kinase inhibitors by high-throughput screening and structure-guided drug design.
Oncotarget, 4, 2013
6U24
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BU of 6u24 by Molmil
NMR solution structure of triazole bridged SFTI-1
Descriptor: 1-methyl-1H-1,2,3-triazole, GLY-ARG-ALA-THR-LYS-SER-ILE-PRO-PRO-ILE-ALA-PHE-PRO-ASP
Authors:White, A.M, Harvey, P.J, Durek, T, Craik, D.J.
Deposit date:2019-08-19
Release date:2020-07-01
Last modified:2020-07-15
Method:SOLUTION NMR
Cite:Application and Structural Analysis of Triazole-Bridged Disulfide Mimetics in Cyclic Peptides.
Angew.Chem.Int.Ed.Engl., 59, 2020

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