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PDB: 46375 results

6ZYR
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BU of 6zyr by Molmil
Structure of IMP-1 with 2-Mercaptomethyl-thiazolidine L-anti-1b
Descriptor: (2~{S},4~{R})-2-ethoxycarbonyl-5,5-dimethyl-2-(sulfanylmethyl)-1,3-thiazolidine-4-carboxylic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Hinchliffe, P, Spencer, J.
Deposit date:2020-08-02
Release date:2021-01-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:2-Mercaptomethyl-thiazolidines use conserved aromatic-S interactions to achieve broad-range inhibition of metallo-beta-lactamases.
Chem Sci, 12, 2021
3KO6
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BU of 3ko6 by Molmil
Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate
Descriptor: METHIONINE SULFOXIDE, UPF0067 GAF domain-containing protein YKL069W
Authors:Ma, X.-X, Guo, P.-C, Chen, Y, Zhou, C.-Z.
Deposit date:2009-11-13
Release date:2010-11-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of yeast free methionine-R-sulfoxide reductase Ykg9 in complex with the substrate
To be Published
4QUD
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BU of 4qud by Molmil
Caspase-3 T140F
Descriptor: ACE-ASP-GLU-VAL-ASP-CHLOROMETHYLKETONE INHIBITOR, Caspase-3
Authors:Cade, C, Swartz, P.D, MacKenzie, S.H, Clark, A.C.
Deposit date:2014-07-10
Release date:2014-11-05
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:Modifying caspase-3 activity by altering allosteric networks.
Biochemistry, 53, 2014
1DVI
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BU of 1dvi by Molmil
CALPAIN DOMAIN VI WITH CALCIUM BOUND
Descriptor: CALCIUM ION, CALPAIN
Authors:Cygler, M, Blanchard, H, Grochulski, P.
Deposit date:1997-05-15
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a calpain Ca(2+)-binding domain reveals a novel EF-hand and Ca(2+)-induced conformational changes.
Nat.Struct.Biol., 4, 1997
3L1R
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BU of 3l1r by Molmil
X-ray structure of the mutant lys300met of polyamine oxidase from zea mays in complex with spermidine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Fiorillo, A, Ilari, A, Tavladoraki, P.
Deposit date:2009-12-14
Release date:2010-12-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of the mutant k300m of polyamine oxidase from zea mays unveils the role of lys300 in catalysis
To be Published
1M1S
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BU of 1m1s by Molmil
Structure of WR4, a C.elegans MSP family member
Descriptor: WR4
Authors:Karpowich, N, Smith, P, Shen, J, Hunt, J, Montelione, G, Northeast Structural Genomics Consortium (NESG)
Deposit date:2002-06-20
Release date:2003-07-29
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a C.elegans MSP family member
To be Published
1M9L
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BU of 1m9l by Molmil
Relaxation-based Refined Structure Of Chlamydomonas Outer Arm Dynein Light Chain 1
Descriptor: Outer Arm Dynein Light Chain 1
Authors:Wu, H.W, Maciejewski, M.W, Marintchev, A, Benashski, S.E, Mullen, G.P, King, S.M.
Deposit date:2002-07-29
Release date:2003-03-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Relaxation-based structure refinement and backbone molecular dynamics of the Dynein motor domain-associated light chain
Biochemistry, 42, 2003
4R0R
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BU of 4r0r by Molmil
Ebolavirus GP Prehairpin Intermediate Mimic
Descriptor: eboIZN21
Authors:Clinton, T.R, Weinstock, M.T, Jacobsen, M.T, Szabo-Fresnais, N, Pandya, M.J, Whitby, F.G, Herbert, A.S, Prugar, L.I, McKinnon, R, Hill, C.P, Welch, B.D, Dye, J.M, Eckert, D.M, Kay, M.S.
Deposit date:2014-08-01
Release date:2014-10-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Design and characterization of ebolavirus GP prehairpin intermediate mimics as drug targets.
Protein Sci., 24, 2015
6ZNM
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BU of 6znm by Molmil
The pointed end complex of dynactin bound to BICDR1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
Authors:Lau, C.K, Lacey, S.E, Carter, A.P.
Deposit date:2020-07-06
Release date:2020-07-29
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM reveals the complex architecture of dynactin's shoulder region and pointed end.
Embo J., 40, 2021
1M7S
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BU of 1m7s by Molmil
Crystal Structure Analysis of Catalase CatF of Pseudomonas syringae
Descriptor: Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Carpena, X, Soriano, M, Klotz, M.G, Duckworth, H.W, Donald, L.J, Melik-Adamyan, W, Fita, I, Loewen, P.C.
Deposit date:2002-07-22
Release date:2002-08-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Clade 1 catalase, CatF of Pseudomonas syringae, at 1.8 A resolution
Proteins, 50, 2003
7AAK
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BU of 7aak by Molmil
Human porphobilinogen deaminase R173W mutant crystallized in the ES2 intermediate state
Descriptor: 3-[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-3-(3-hydroxy-3-oxopropyl)-5-methyl-1~{H}-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-1~{H}-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-1~{H}-pyrrol-2-yl]methyl]-1~{H}-pyrrol-3-yl]propanoic acid, GLYCEROL, Porphobilinogen deaminase
Authors:Kallio, J.P, Bustad, H.J, Martinez, A.
Deposit date:2020-09-04
Release date:2021-02-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Characterization of porphobilinogen deaminase mutants reveals that arginine-173 is crucial for polypyrrole elongation mechanism.
Iscience, 24, 2021
4L99
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BU of 4l99 by Molmil
Structure of the RBP from lactococcal phage 1358 in complex with glycerol
Descriptor: GLYCEROL, Receptor Binding Protein, ZINC ION
Authors:Farenc, C, Spinelli, S, Bebeacua, C, Tremblay, D, Orlov, I, Blangy, S, Klaholz, B.P, Moineau, S, Cambillau, C.
Deposit date:2013-06-18
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Virulent Siphophage CyoEM Structure and Host Recognition and Infection Mechanism
To be Published
4LBM
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BU of 4lbm by Molmil
Crystal structure of Human galectin-3 CRD in complex with LNT
Descriptor: CHLORIDE ION, Galectin-3, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Collins, P.M, Blanchard, H.
Deposit date:2013-06-20
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Galectin-3 interactions with glycosphingolipids.
J.Mol.Biol., 426, 2014
7P5R
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BU of 7p5r by Molmil
Racemic protein crystal structure of lacticin Q from Lactococcus lactis
Descriptor: D-Lacticin Q, FORMIC ACID, Lacticin Q
Authors:Lander, A.J, Li, X, Baumann, P, Rizkallah, P, Luk, L.Y.P, Jin, Y.
Deposit date:2021-07-14
Release date:2022-07-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Roles of inter- and intramolecular tryptophan interactions in membrane-active proteins revealed by racemic protein crystallography.
Commun Chem, 6, 2023
4ON9
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BU of 4on9 by Molmil
DECH box helicase domain
Descriptor: CHLORIDE ION, Probable ATP-dependent RNA helicase DDX58, SULFATE ION
Authors:Deimling, T, Witte, G, Hopfner, K.P.
Deposit date:2014-01-28
Release date:2014-07-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal and solution structure of the human RIG-I SF2 domain
Acta Crystallogr.,Sect.F, 70, 2014
4LA0
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BU of 4la0 by Molmil
X-ray study of human serum albumin complexed with bicalutamide
Descriptor: R-BICALUTAMIDE, SERUM ALBUMIN
Authors:Wang, Z, Ho, J.X, Ruble, J, Rose, J.P, Carter, D.C.
Deposit date:2013-06-18
Release date:2013-07-24
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural studies of several clinically important oncology drugs in complex with human serum albumin.
Biochim.Biophys.Acta, 1830, 2013
1MFV
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BU of 1mfv by Molmil
Probing the role of a mobile loop in human slaivary amylase: Structural studies on the loop-deleted enzyme
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, ...
Authors:Ramasubbu, N, Ragunath, C, Mishra, P.J.
Deposit date:2002-08-13
Release date:2002-11-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the role of a mobile loop in substrate binding and enzyme activity of human salivary amylase.
J.Mol.Biol., 325, 2003
4LAV
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BU of 4lav by Molmil
Crystal Structure Analysis of FKBP52, Crystal Form II
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP4, SULFATE ION
Authors:Bracher, A, Kozany, C, Haehle, A, Wild, P, Zacharias, M, Hausch, F.
Deposit date:2013-06-20
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of the Free and Ligand-Bound FK1-FK2 Domain Segment of FKBP52 Reveal a Flexible Inter-Domain Hinge.
J.Mol.Biol., 425, 2013
4LBO
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BU of 4lbo by Molmil
Crystal structure of Human galectin-3 CRD in complex with a-GM3
Descriptor: CHLORIDE ION, Galectin-3, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Collins, P.M, Blanchard, H.
Deposit date:2013-06-20
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Galectin-3 interactions with glycosphingolipids.
J.Mol.Biol., 426, 2014
6V84
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BU of 6v84 by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAc
Descriptor: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, LyCALAc
Authors:Gill, N.P, Madden, D.R.
Deposit date:2019-12-10
Release date:2021-02-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAc
To Be Published
1MG1
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BU of 1mg1 by Molmil
HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA
Descriptor: CHLORIDE ION, PROTEIN (HTLV-1 GP21 ECTODOMAIN/MALTOSE-BINDING PROTEIN CHIMERA), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kobe, B, Center, R.J, Kemp, B.E, Poumbourios, P.
Deposit date:1999-03-01
Release date:1999-04-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human T cell leukemia virus type 1 gp21 ectodomain crystallized as a maltose-binding protein chimera reveals structural evolution of retroviral transmembrane proteins.
Proc.Natl.Acad.Sci.USA, 96, 1999
6VGI
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BU of 6vgi by Molmil
Crystal Structures of FLAP bound to MK-866
Descriptor: 3-[3-(tert-butylsulfanyl)-1-[(4-chlorophenyl)methyl]-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic acid, 5-lipoxygenase-activating protein, SULFATE ION
Authors:Ho, J.D, Lee, M.R, Rauch, C.T, Aznavour, K, Park, J.S, Luz, J.G, Antonysamy, S, Condon, B, Maletic, M, Zhang, A, Hickey, M.J, Hughes, N.E, Chandrasekhar, S, Sloan, A.V, Gooding, K, Harvey, A, Yu, X.P, Kahl, S.D, Norman, B.H.
Deposit date:2020-01-08
Release date:2020-12-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure-based, multi-targeted drug discovery approach to eicosanoid inhibition: Dual inhibitors of mPGES-1 and 5-lipoxygenase activating protein (FLAP).
Biochim Biophys Acta Gen Subj, 1865, 2020
6GUF
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BU of 6guf by Molmil
CDK2/CyclinA in complex with CGP74514A
Descriptor: Cyclin-A2, Cyclin-dependent kinase 2, N2-[(1R,2S)-2-AMINOCYCLOHEXYL]-N6-(3-CHLOROPHENYL)-9-ETHYL-9H-PURINE-2,6-DIAMINE
Authors:Wood, D.J, Korolchuk, S, Tatum, N.J, Wang, L.Z, Endicott, J.A, Noble, M.E.M, Martin, M.P.
Deposit date:2018-06-19
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Differences in the Conformational Energy Landscape of CDK1 and CDK2 Suggest a Mechanism for Achieving Selective CDK Inhibition.
Cell Chem Biol, 26, 2019
4LEC
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BU of 4lec by Molmil
Human Methyltransferase-Like Protein 21A
Descriptor: Protein-lysine methyltransferase METTL21A, S-ADENOSYL-L-HOMOCYSTEINE, UNKNOWN ATOM OR ION
Authors:Dong, A, Zeng, H, Fenner, M, Wernimont, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2013-06-25
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The Crystal Structure of Human Methyltransferase-Like Protein 21A in Complex with SAH
To be Published
6ZPA
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BU of 6zpa by Molmil
Cyanophage S-2L HD phosphohydrolase (DatZ) bound to dA and one catalytic Zn2+ ion
Descriptor: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol, DatZ, LITHIUM ION, ...
Authors:Czernecki, D, Legrand, P, Delarue, M.
Deposit date:2020-07-08
Release date:2021-03-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (0.86000258 Å)
Cite:How cyanophage S-2L rejects adenine and incorporates 2-aminoadenine to saturate hydrogen bonding in its DNA.
Nat Commun, 12, 2021

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