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PDB: 45955 results

8IYO
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BU of 8iyo by Molmil
Crystal structure of a protein acetyltransferase, HP0935, acetyl-CoA bound form
Descriptor: ACETYL COENZYME *A, N-acetyltransferase domain-containing protein
Authors:Dadireddy, V, Mahanta, P, Kumar, A, Desirazu, R.N, Ramakumar, S.
Deposit date:2023-04-05
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a protein acetyltransferase, HP0935, acetyl-CoA bound form
To be published
3MLE
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BU of 3mle by Molmil
Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori cocrystallized with ATP
Descriptor: 8-aminooctanoic acid, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Nicholls, R, Porebski, P.J, Klimecka, M.M, Chruszcz, M, Murzyn, K, Joachimiak, A, Murshudov, G, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-04-16
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.
Febs J., 279, 2012
3MLX
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BU of 3mlx by Molmil
Crystal structure of anti-HIV-1 V3 Fab 3074 in complex with an MN V3 peptide
Descriptor: HIV-1 gp120 third variable region (V3) crown, Human monoclonal anti-HIV-1 gp120 V3 antibody 3074 Fab heavy chain, Human monoclonal anti-HIV-1 gp120 V3 antibody 3074 Fab light chain
Authors:Kong, X.-P.
Deposit date:2010-04-18
Release date:2010-07-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conserved structural elements in the V3 crown of HIV-1 gp120.
Nat.Struct.Mol.Biol., 17, 2010
6XXW
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BU of 6xxw by Molmil
Structure of beta-D-Glucuronidase for Dictyoglomus thermophilum.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucuronidase, ...
Authors:Lafite, P, Daniellou, R.
Deposit date:2020-01-28
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Thioglycoligation of aromatic thiols using a natural glucuronide donor.
Org.Biomol.Chem., 18, 2020
5TNZ
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HtrA2 S142D mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SODIUM ION, Serine protease HTRA2, ...
Authors:Macedo-Ribeiro, S, Merski, M, Pereira, P.J.B.
Deposit date:2016-10-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.
Cell Death Dis, 8, 2017
3MM8
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BU of 3mm8 by Molmil
Dissimilatory sulfite reductase nitrate complex
Descriptor: IRON/SULFUR CLUSTER, NITRATE ION, SIROHEME, ...
Authors:Parey, K, Warkentin, E, Kroneck, P.M.H, Ermler, U.
Deposit date:2010-04-19
Release date:2010-07-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Reaction cycle of the dissimilatory sulfite reductase from Archaeoglobus fulgidus.
Biochemistry, 49, 2010
1JQA
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BU of 1jqa by Molmil
Bacillus stearothermophilus glycerol dehydrogenase complex with glycerol
Descriptor: GLYCEROL, Glycerol Dehydrogenase, ZINC ION
Authors:Ruzheinikov, S.N, Burke, J, Sedelnikova, S, Baker, P.J, Taylor, R, Bullough, P.A, Muir, N.M, Gore, M.G, Rice, D.W.
Deposit date:2001-08-04
Release date:2001-10-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Glycerol dehydrogenase. structure, specificity, and mechanism of a family III polyol dehydrogenase.
Structure, 9, 2001
2W1H
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Fragment-Based Discovery of the Pyrazol-4-yl urea (AT9283), a Multi- targeted Kinase Inhibitor with Potent Aurora Kinase Activity
Descriptor: CELL DIVISION PROTEIN KINASE 2, N-[3-(1H-BENZIMIDAZOL-2-YL)-1H-PYRAZOL-4-YL]BENZAMIDE
Authors:Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
Deposit date:2008-10-17
Release date:2009-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
2VTA
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Identification of N-(4-piperidinyl)-4-(2,6-dichlorobenzoylamino)-1H- pyrazole-3-carboxamide (AT7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
Descriptor: 1H-indazole, CELL DIVISION PROTEIN KINASE 2, GLYCEROL
Authors:Wyatt, P.G, Woodhead, A.J, Boulstridge, J.A, Berdini, V, Carr, M.G, Cross, D.M, Danillon, D, Davis, D.J, Devine, L.A, Early, T.R, Feltell, R.E, Lewis, E.J, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Reule, M, Saxty, G, Seavers, L.C.A, Smith, D, Squires, M.S, Trewartha, G, Walker, M.T, Woolford, A.J.
Deposit date:2008-05-13
Release date:2008-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of N-(4-Piperidinyl)-4-(2,6-Dichlorobenzoylamino)-1H-Pyrazole-3-Carboxamide (at7519), a Novel Cyclin Dependent Kinase Inhibitor Using Fragment-Based X-Ray Crystallography and Structure Based Drug Design.
J.Med.Chem., 51, 2008
1QQ3
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THE SOLUTION STRUCTURE OF THE HEME BINDING VARIANT ARG98CYS OF OXIDIZED ESCHERICHIA COLI CYTOCHROME B562
Descriptor: CYTOCHROME B562, HEME B/C
Authors:Arnesano, F, Banci, L, Bertini, I, Ciofi-Baffoni, S, Barker, P.D, Woodyear, T.
Deposit date:1999-06-10
Release date:2000-05-24
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Structural consequences of b- to c-type heme conversion in oxidized Escherichia coli cytochrome b562.
Biochemistry, 39, 2000
2AGA
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BU of 2aga by Molmil
De-ubiquitinating function of ataxin-3: insights from the solution structure of the Josephin domain
Descriptor: Machado-Joseph disease protein 1
Authors:Mao, Y, Senic-Matuglia, F, Di Fiore, P, Polo, S, Hodsdon, M.E, De Camilli, P.
Deposit date:2005-07-26
Release date:2005-08-30
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Deubiquitinating function of ataxin-3: insights from the solution structure of the Josephin domain.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5MUF
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BU of 5muf by Molmil
Crystal structure of human phosphoglycerate mutase family member 5 (PGAM5) in its enzymatically active dodecameric form induced by the presence of the N-terminal WDPNWD motif
Descriptor: PHOSPHATE ION, Serine/threonine-protein phosphatase PGAM5, mitochondrial
Authors:Chaikuad, A, Alfano, I, Picaud, S, Filippakopoulos, P, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2017-01-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of PGAM5 Provide Insight into Active Site Plasticity and Multimeric Assembly.
Structure, 25, 2017
3ZS0
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BU of 3zs0 by Molmil
Human Myeloperoxidase inactivated by TX2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-FLUOROBENZYL)-2-THIOXO-1,2,3,7-TETRAHYDRO-6H-PURIN-6-ONE, ACETATE ION, ...
Authors:Tiden, A.K, Sjogren, T, Svensson, M, Bernlind, A, Senthilmohan, R, Auchere, F, Norman, H, Markgren, P.O, Gustavsson, S, Schmidt, S, Lundquist, S, Forbes, L.V, Magon, N.J, Jameson, G.N, Eriksson, H, Kettle, A.J.
Deposit date:2011-06-21
Release date:2011-08-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:2-Thioxanthines are Mechanism-Based Inactivators of Myeloperoxidase that Block Oxidative Stress During Inflammation.
J.Biol.Chem., 286, 2011
3ZUP
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BU of 3zup by Molmil
The 3-dimensional structure of MpgP from Thermus thermophilus HB27, in complex with the alpha-mannosylglycerate and orthophosphate reaction products.
Descriptor: (2R)-3-hydroxy-2-(alpha-D-mannopyranosyloxy)propanoic acid, MAGNESIUM ION, MANNOSYL-3-PHOSPHOGLYCERATE PHOSPHATASE, ...
Authors:Goncalves, S, Esteves, A.M, Santos, H, Borges, N, Matias, P.M.
Deposit date:2011-07-19
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.804 Å)
Cite:The Three-Dimensional Structure of Mannosyl-3-Phosphoglycerate Phosphatase from Thermus Thermophilus Hb27: A New Member of the Haloalkanoic Acid Dehalogenase Superfamily.
Biochemistry, 50, 2011
1JZD
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BU of 1jzd by Molmil
DsbC-DsbDalpha complex
Descriptor: thiol:disulfide interchange protein dsbc, thiol:disulfide interchange protein dsbd
Authors:Haebel, P.W, Goldstone, D, Katzen, F, Beckwith, J, Metcalf, P.
Deposit date:2001-09-15
Release date:2003-03-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Disulfide Bond Isomerase DsbC is Activated by an Immunoglobulin-fold Thiol Oxidoreductase: Crystal structure of the DsbC-DsbDalpha complex.
Embo J., 21, 2002
2W3J
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BU of 2w3j by Molmil
Structure of a family 35 carbohydrate binding module from an environmental isolate
Descriptor: CALCIUM ION, CARBOHYDRATE BINDING MODULE
Authors:Montainer, C, Flint, J, Gloster, T.M, Turkenburg, J.P, Davies, G.J, Gilbert, H.J.
Deposit date:2008-11-12
Release date:2009-01-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Evidence that Family 35 Carbohydrate Binding Modules Display Conserved Specificity But Divergent Function.
Proc.Natl.Acad.Sci.USA, 106, 2009
2XI1
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BU of 2xi1 by Molmil
Crystal structure of the HIV-1 Nef sequenced from a patient's sample
Descriptor: NEF
Authors:Yadav, G.P, Singh, P, Gupta, S, Tripathi, A.K, Tripathi, R.K, Ramachandran, R.
Deposit date:2010-06-25
Release date:2011-08-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A Novel Dimer-Tetramer Transition Captured by the Crystal Structure of the HIV-1 Nef.
Plos One, 6, 2011
1ADX
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BU of 1adx by Molmil
FIFTH EGF-LIKE DOMAIN OF THROMBOMODULIN (TMEGF5), NMR, 14 STRUCTURES
Descriptor: THROMBOMODULIN
Authors:Sampoli-Benitez, B.A, Hunter, M.J, Meininger, D.P, Komives, E.A.
Deposit date:1997-02-18
Release date:1997-12-24
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of the fifth EGF-like domain of thrombomodulin: An EGF-like domain with a novel disulfide-bonding pattern.
J.Mol.Biol., 273, 1997
2BAA
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BU of 2baa by Molmil
THE REFINED CRYSTAL STRUCTURE OF AN ENDOCHITINASE FROM HORDEUM VULGARE L. SEEDS TO 1.8 ANGSTROMS RESOLUTION
Descriptor: ENDOCHITINASE (26 KD)
Authors:Hart, P.J, Pfluger, H.D, Monzingo, A.F, Ready, M.P, Ernst, S.R, Hollis, T, Robertus, J.D.
Deposit date:1995-01-26
Release date:1996-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The refined crystal structure of an endochitinase from Hordeum vulgare L. seeds at 1.8 A resolution.
J.Mol.Biol., 248, 1995
6XCR
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BU of 6xcr by Molmil
NMR structure of Ost4 in DPC micelles
Descriptor: Oligosaccharyltransferase
Authors:Chaudhary, B.P.
Deposit date:2020-06-09
Release date:2021-02-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR and MD simulations reveal the impact of the V23D mutation on the function of yeast oligosaccharyltransferase subunit Ost4.
Glycobiology, 31, 2021
7RFA
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BU of 7rfa by Molmil
NMR Solution structure of linear [T20K]kalataB1
Descriptor: Kalata-B4
Authors:Harvey, P.J, Craik, D.J, Gruber, C.W.
Deposit date:2021-07-14
Release date:2021-10-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Importance of the Cyclic Cystine Knot Structural Motif for Immunosuppressive Effects of Cyclotides.
Acs Chem.Biol., 16, 2021
1KX2
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BU of 1kx2 by Molmil
Minimized average structure of a mono-heme ferrocytochrome c from Shewanella putrefaciens
Descriptor: HEME C, mono-heme c-type cytochrome ScyA
Authors:Bartalesi, I, Bertini, I, Hajieva, P, Rosato, A, Vasos, P.R.
Deposit date:2002-01-30
Release date:2002-02-13
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a monoheme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications.
Biochemistry, 41, 2002
4XVP
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BU of 4xvp by Molmil
X-ray structure of bGFP-C / EGFP complex
Descriptor: BGFP-C, Green fluorescent protein
Authors:Chevrel, A, Urvoas, A, Li de la Sierra-Gallay, I, Van Tilbeurgh, H, Minard, P, Valerio-Lepiniec, M.
Deposit date:2015-01-27
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Specific GFP-binding artificial proteins ( alpha Rep): a new tool for in vitro to live cell applications.
Biosci.Rep., 35, 2015
8HX1
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BU of 8hx1 by Molmil
Focused cryo-EM map of MsDps2 from MsDps2-DNA complex of Mycobacterium smegmatis
Descriptor: Putative starvation-induced DNA protecting protein/Ferritin and Dps
Authors:Dutta, S, Garg, P.
Deposit date:2023-01-03
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Focused cryo-EM map of MsDps2 from MsDps2-DNA complex of Mycobacterium smegmatis
To Be Published
8HX0
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Cryo-EM structure of MsDps2 from Mycobacterium smegmatis
Descriptor: Putative starvation-induced DNA protecting protein/Ferritin and Dps
Authors:Garg, P, Dutta, S.
Deposit date:2023-01-03
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of MsDps2 from Mycobacterium smegmatis
To Be Published

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