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PDB: 127 results

3ALS
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Crystal structure of CEL-IV
Descriptor: CALCIUM ION, Lectin CEL-IV, C-type
Authors:Hatakeyama, T, Hozawa, T, Ishii, K, Kamiya, T, Goda, S, Kusunoki, M, Unno, H.
Deposit date:2010-08-07
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Galactose recognition by a tetrameric C-type lectin, CEL-IV, containing the EPN carbohydrate recognition motif
J.Biol.Chem., 286, 2011
3AW0
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Structure of SARS 3CL protease with peptidic aldehyde inhibitor
Descriptor: 3C-Like Proteinase, peptide ACE-SER-ALA-VAL-LEU-HIS-H
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-03-09
Release date:2011-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
3AJ7
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Crystal Structure of isomaltase from Saccharomyces cerevisiae
Descriptor: CALCIUM ION, Oligo-1,6-glucosidase
Authors:Yamamoto, K, Miyake, H, Kusunoki, M, Osaki, S.
Deposit date:2010-05-26
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of isomaltase from Saccharomyces cerevisiae and in complex with its competitive inhibitor maltose
Febs J., 277, 2010
3AW1
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Structure of SARS 3CL protease auto-proteolysis resistant mutant in the absent of inhibitor
Descriptor: 3C-Like Proteinase
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-03-09
Release date:2011-12-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
3ATW
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Structure-Based Design, Synthesis, Evaluation of Peptide-mimetic SARS 3CL Protease Inhibitors
Descriptor: 3C-Like Proteinase, peptide ACE-THR-VAL-ALC-HIS-H
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-01-20
Release date:2011-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
3AVZ
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Structure of SARS 3CL protease with peptidic aldehyde inhibitor containing cyclohexyl side chain
Descriptor: 3C-Like Proteinase, peptide ACE-SER-ALA-VAL-ALC-HIS-H
Authors:Akaji, K, Konno, H, Mitsui, H, Teruya, K, Hattori, Y, Ozaki, T, Kusunoki, M, Sanjho, A.
Deposit date:2011-03-09
Release date:2011-12-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure-Based Design, Synthesis, and Evaluation of Peptide-Mimetic SARS 3CL Protease Inhibitors.
J.Med.Chem., 54, 2011
2ZOG
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Crystal structure of mouse carnosinase CN2 complexed with ZN and bestatin
Descriptor: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Cytosolic non-specific dipeptidase, ZINC ION
Authors:Unno, H, Yamashita, T, Okumura, N, Kusunoki, M.
Deposit date:2008-05-14
Release date:2008-06-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for substrate recognition and hydrolysis by mouse carnosinase CN2.
J.Biol.Chem., 283, 2008
2ZRU
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Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Isopentenyl-diphosphate delta-isomerase
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
3A4A
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Crystal structure of isomaltase from Saccharomyces cerevisiae
Descriptor: CALCIUM ION, Oligo-1,6-glucosidase, alpha-D-glucopyranose
Authors:Yamamoto, K, Miyake, H, Kusunoki, M, Osaki, S.
Deposit date:2009-07-01
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of isomaltase from Saccharomyces cerevisiae and in complex with its competitive inhibitor maltose
Febs J., 277, 2010
3AXH
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Crystal structure of isomaltase in complex with isomaltose
Descriptor: CALCIUM ION, Oligo-1,6-glucosidase IMA1, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose
Authors:Yamamoto, K, Miyake, H, Kusunoki, M, Osaki, S.
Deposit date:2011-04-06
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Steric hindrance by 2 amino acid residues determines the substrate specificity of isomaltase from Saccharomyces cerevisiae
J.Biosci.Bioeng., 112, 2011
3AXI
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Crystal structure of isomaltase in complex with maltose
Descriptor: CALCIUM ION, Oligo-1,6-glucosidase IMA1, alpha-D-glucopyranose
Authors:Yamamoto, K, Miyake, H, Kusunoki, M, Osaki, S.
Deposit date:2011-04-06
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Steric hindrance by 2 amino acid residues determines the substrate specificity of isomaltase from Saccharomyces cerevisiae
J.Biosci.Bioeng., 112, 2011
1GEG
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CRYATAL STRUCTURE ANALYSIS OF MESO-2,3-BUTANEDIOL DEHYDROGENASE
Descriptor: ACETOIN REDUCTASE, BETA-MERCAPTOETHANOL, MAGNESIUM ION, ...
Authors:Otagiri, M, Kurisu, G, Ui, S, Kusunoki, M.
Deposit date:2000-11-10
Release date:2001-02-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of meso-2,3-butanediol dehydrogenase in a complex with NAD+ and inhibitor mercaptoethanol at 1.7 A resolution for understanding of chiral substrate recognition mechanisms.
J.Biochem., 129, 2001
1IWP
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BU of 1iwp by Molmil
Glycerol Dehydratase-cyanocobalamin Complex of Klebsiella pneumoniae
Descriptor: COBALAMIN, Glycerol Dehydratase Alpha subunit, Glycerol Dehydratase Beta subunit, ...
Authors:Yamanishi, M, Yunoki, M, Tobimatsu, T, Toraya, T.
Deposit date:2002-05-28
Release date:2002-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of coenzyme B12-dependent glycerol dehydratase in complex with cobalamin and propane-1,2-diol.
Eur.J.Biochem., 269, 2002
1J10
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beta-amylase from Bacillus cereus var. mycoides in complex with GGX
Descriptor: Beta-amylase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-xylopyranose, ...
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J11
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beta-amylase from Bacillus cereus var. mycoides in complex with alpha-EPG
Descriptor: (2R)-oxiran-2-ylmethyl alpha-D-glucopyranoside, Beta-amylase, CALCIUM ION
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J12
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Beta-Amylase from Bacillus cereus var. mycoides in Complex with alpha-EBG
Descriptor: 2-[(2S)-oxiran-2-yl]ethyl alpha-D-glucopyranoside, Beta-amylase, CALCIUM ION
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J0Z
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Beta-amylase from Bacillus cereus var. mycoides in complex with maltose
Descriptor: Beta-amylase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
1J0Y
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Beta-amylase from Bacillus cereus var. mycoides in complex with glucose
Descriptor: Beta-amylase, CALCIUM ION, beta-D-glucopyranose
Authors:Oyama, T, Miyake, H, Kusunoki, M, Nitta, Y.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of beta-Amylase from Bacillus cereus var. mycoides in Complexes with Substrate Analogs and Affinity-Labeling Reagents
J.BIOCHEM.(TOKYO), 133, 2003
3WMH
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BU of 3wmh by Molmil
Human PPAR gamma ligand binding domain in complex with a gammma selective synthetic partial agonist MEKT75
Descriptor: N-(phenylsulfonyl)-4-propoxy-3-({[4-(pyrimidin-2-yl)benzoyl]amino}methyl)benzamide, Peroxisome proliferator-activated receptor gamma
Authors:Oyama, T, Ohashi, M, Miyachi, H, Kusunoki, M.
Deposit date:2013-11-19
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human PPRR gamma ligand binding domain in complex with a gammma selective synthetic partial agonist MEKT75
TO BE PUBLISHED
1OMY
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BU of 1omy by Molmil
Crystal Structure of a Recombinant alpha-insect Toxin BmKaIT1 from the scorpion Buthus martensii Karsch
Descriptor: ACETIC ACID, Alpha-neurotoxin TX12, CHLORIDE ION
Authors:Huang, Y, Huang, Q, Chen, H, Tang, Y, Miyake, H, Kusunoki, M.
Deposit date:2003-02-26
Release date:2003-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallization and preliminary crystallographic study of rBmKalphaIT1, a recombinant alpha-insect toxin from the scorpion Buthus martensii Karsch.
Acta Crystallogr.,Sect.D, 59, 2003
3WJ1
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Crystal structure of SSHESTI
Descriptor: Carboxylesterase, octyl beta-D-glucopyranoside
Authors:Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
Deposit date:2013-10-03
Release date:2014-07-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
3WJ2
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Crystal structure of ESTFA (FE-lacking apo form)
Descriptor: Carboxylesterase
Authors:Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
Deposit date:2013-10-03
Release date:2014-07-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
1OX1
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crystal structure of the bovine trypsin complex with a synthetic 11 peptide inhibitor
Descriptor: 11-mer peptide, CALCIUM ION, Trypsinogen, ...
Authors:Wu, G, Huang, Y, Zhu, G, Huang, Q, Tang, Y, Miyake, H, Kusunoki, M.
Deposit date:2003-03-31
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:crystal structure of the bovine trypsin complex with a synthetic 11 peptide inhibitor
To be published
1GAQ
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CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN FERREDOXIN AND FERREDOXIN-NADP+ REDUCTASE
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN I, FERREDOXIN-NADP+ REDUCTASE, ...
Authors:Kurisu, G, Kusunoki, M, Hase, T.
Deposit date:2000-05-08
Release date:2001-02-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of the electron transfer complex between ferredoxin and ferredoxin-NADP(+) reductase.
Nat.Struct.Biol., 8, 2001
1ITC
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Beta-Amylase from Bacillus cereus var. mycoides Complexed with Maltopentaose
Descriptor: ACETIC ACID, Beta-Amylase, CALCIUM ION, ...
Authors:Miyake, H, Kurisu, G, Kusunoki, M, Nishimura, S, Kitamura, S, Nitta, Y.
Deposit date:2002-01-17
Release date:2003-05-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Catalytic Site Mutant of beta-Amylase from Bacillus cereus var. mycoides Cocrystallized with Maltopentaose
BIOCHEMISTRY, 42, 2003

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